expected:
allelefreqs:
- sample_name > 0.45 && sample_name < 0.55
posteriors:
- PROB_SOMATIC_TUMOR <= 0.05
- PROB_GERMLINE_HET > 0.05
samples:
{% for (name, sample) in samples -%}
{{ name }}:
path: '{{ sample.path }}'
properties: '{{ sample.properties }}'
options: '{{ sample.options }}'
{% endfor %}
candidate: '{{ candidate }}'
{% if scenario.is_some() -%}
scenario: '{{ scenario.as_ref().unwrap() }}'
{% endif %}
{% if purity.is_some() -%}
purity: {{ purity.unwrap() }}
{% endif %}
reference:
path: '{{ ref_path }}'
mode: {{ mode }}
version: '4'