varfish-server-worker 0.17.3

[[bin]]
name = "varfish-server-worker"
path = "src/main.rs"

[build-dependencies.anyhow]
version = "1.0"

[build-dependencies.pbjson-build]
version = "0.7.0"

[build-dependencies.prost-build]
version = "0.13"

[dependencies.annonars]
version = "0.41"

[dependencies.anyhow]
version = "1.0"

[dependencies.async-compression]
features = ["tokio", "gzip"]
version = "0.4"

[dependencies.aws-config]
features = ["behavior-version-latest"]
version = "1.5"

[dependencies.aws-sdk-s3]
features = ["behavior-version-latest"]
version = "1.51"

[dependencies.base16ct]
version = "0.2"

[dependencies.bio]
version = "2.0"

[dependencies.biocommons-bioutils]
version = "0.1"

[dependencies.byte-unit]
version = "5.1"

[dependencies.byteorder]
features = ["i128"]
version = "1.5"

[dependencies.bytesize]
version = "2.0"

[dependencies.chrono]
features = ["serde"]
version = "0.4"

[dependencies.clap]
features = ["derive", "help"]
version = "4.5"

[dependencies.clap-verbosity-flag]
version = "3.0"

[dependencies.console]
version = "0.15"

[dependencies.csv]
version = "1.3"

[dependencies.derive-new]
version = "0.7.0"

[dependencies.derive_builder]
features = ["clippy"]
version = "0.20"

[dependencies.enum-map]
features = ["serde"]
version = "2.7"

[dependencies.ext-sort]
features = ["memory-limit", "bytesize"]
version = "0.1"

[dependencies.fastrand]
version = "2.3"

[dependencies.flate2]
version = "1.1"

[dependencies.futures]
version = "0.3.31"

[dependencies.hgvs]
version = "0.17.3"

[dependencies.indexmap]
features = ["serde"]
version = "2.9"

[dependencies.itertools]
version = "0.14"

[dependencies.log]
version = "0.4"

[dependencies.mehari]
version = "0.29.6"

[dependencies.multimap]
version = "0.10"

[dependencies.noodles]
features = ["bgzf", "core", "csi", "tabix", "vcf", "bcf"]
version = "0.77.0"

[dependencies.pbjson]
version = "0.7"

[dependencies.pbjson-types]
version = "0.7"

[dependencies.procfs]
version = "0.17"

[dependencies.prost]
version = "0.13.5"

[dependencies.rand]
version = "0.8"

[dependencies.rand_core]
version = "0.6"

[dependencies.rayon]
version = "1.10"

[dependencies.regex]
version = "1.11"

[dependencies.rocksdb]
features = ["multi-threaded-cf"]
version = "0.22"

[dependencies.rocksdb-utils-lookup]
version = "0.4"

[dependencies.serde]
features = ["serde_derive"]
version = "1.0"

[dependencies.serde_json]
version = "1.0"

[dependencies.serde_with]
features = ["indexmap_2"]
version = "3.12"

[dependencies.shellexpand]
version = "3.1"

[dependencies.strum]
features = ["derive"]
version = "0.26"

[dependencies.strum_macros]
version = "0.27"

[dependencies.tempfile]
version = "3.19.1"

[dependencies.thiserror]
version = "2.0"

[dependencies.thousands]
version = "0.2"

[dependencies.tokio]
features = ["full"]
version = "1.44"

[dependencies.tracing]
version = "0.1"

[dependencies.tracing-subscriber]
version = "0.3"

[dependencies.uuid]
features = ["v4", "fast-rng", "serde"]
version = "1.13"

[dev-dependencies.async-std]
features = ["attributes"]
version = "1.13"

[dev-dependencies.file_diff]
version = "1.0"

[dev-dependencies.float-cmp]
version = "0.10"

[dev-dependencies.hxdmp]
version = "0.2.1"

[dev-dependencies.insta]
features = ["yaml"]
version = "1.42"

[dev-dependencies.pretty_assertions]
version = "1.4"

[dev-dependencies.rstest]
version = "0.25.0"

[dev-dependencies.serde_test]
version = "1.0"

[dev-dependencies.temp_testdir]
version = "0.2"

[dev-dependencies.tracing-test]
version = "0.2"

[package]
authors = ["Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>"]
autobenches = false
autobins = false
autoexamples = false
autolib = false
autotests = false
build = "build.rs"
description = "Rust-based worker for varfish-server"
edition = "2021"
license = "MIT"
name = "varfish-server-worker"
readme = "README.md"
repository = "https://github.com/bihealth/varfish-server-worker"
rust-version = "1.70.0"
version = "0.17.3"