tsg 0.1.1

A tool to analyze and manipulate transcript segment graph (TSG)
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.	tsg	transcript	.	.	.	.	.	transcript_id "0";
chr1	tsg	exon	1000	1200	.	+	.	exon_id "000"; ptc "10"; expression "10.5"; segment_id "000"; transcript_id "0"; 
chr1	tsg	exon	1500	1700	.	+	.	exon_id "001"; ptc "10"; expression "10.5"; segment_id "000"; transcript_id "0"; 
chr1	tsg	exon	2500	2700	.	+	.	exon_id "000"; segment_id "001"; segment_id "000"; transcript_id "0"; 
chr1	tsg	exon	2500	2700	.	-	.	exon_id "000"; segment_id "002"; segment_id "001"; segment_id "000"; transcript_id "0"; 
.	tsg	transcript	.	.	.	.	.	transcript_id "1";
chr1	tsg	exon	2000	2200	.	+	.	exon_id "000"; segment_id "000"; transcript_id "1"; 
chr1	tsg	exon	2500	2700	.	+	.	exon_id "000"; segment_id "001"; segment_id "000"; transcript_id "1"; 
chr1	tsg	exon	2500	2700	.	+	.	exon_id "000"; segment_id "002"; segment_id "001"; segment_id "000"; transcript_id "1";