[package]
edition = "2024"
rust-version = "1.85.1"
name = "tsalign"
version = "0.21.3"
authors = ["Sebastian Schmidt <sebastian.schmidt@helsinki.fi>"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "A sequence-to-sequence aligner that accounts for template switches"
readme = false
license = "BSD-2-Clause"
repository = "https://github.com/sebschmi/template-switch-aligner"
resolver = "2"
[lib]
name = "tsalign"
path = "src/lib.rs"
[[bin]]
name = "tsalign"
path = "src/main.rs"
[dependencies.anyhow]
version = "1.0.97"
[dependencies.bincode]
version = "2.0.1"
features = ["serde"]
[dependencies.clap]
version = "4.5.54"
features = ["derive"]
[dependencies.compact-genome]
version = "12.5.0"
features = ["io"]
[dependencies.lib_ts_chainalign]
version = "0.3.3"
[dependencies.lib_tsalign]
version = "0.21.3"
features = ["serde"]
[dependencies.lib_tsshow]
version = "0.21.3"
[dependencies.log]
version = "0.4.29"
[dependencies.serde]
version = "1.0.228"
[dependencies.sha]
version = "1.0.3"
[dependencies.simplelog]
version = "0.12.2"
[dependencies.toml]
version = "0.9.8"
[dependencies.traitsequence]
version = "8.1.2"
[dependencies.utf8-chars]
version = "3.0.5"