[[bin]]
name = "tsalign"
path = "src/main.rs"
[dependencies.anyhow]
version = "1.0.97"
[dependencies.bincode]
features = ["serde"]
version = "2.0.1"
[dependencies.clap]
features = ["derive"]
version = "4.5.54"
[dependencies.compact-genome]
features = ["io"]
version = "12.5.0"
[dependencies.lib_ts_chainalign]
version = "0.3.0"
[dependencies.lib_tsalign]
features = ["serde"]
version = "0.21.0"
[dependencies.lib_tsshow]
version = "0.21.0"
[dependencies.log]
version = "0.4.29"
[dependencies.serde]
version = "1.0.228"
[dependencies.sha]
version = "1.0.3"
[dependencies.simplelog]
version = "0.12.2"
[dependencies.toml]
version = "0.9.8"
[dependencies.traitsequence]
version = "8.1.2"
[dependencies.utf8-chars]
version = "3.0.5"
[lib]
name = "tsalign"
path = "src/lib.rs"
[package]
authors = ["Sebastian Schmidt <sebastian.schmidt@helsinki.fi>"]
autobenches = false
autobins = false
autoexamples = false
autolib = false
autotests = false
build = false
description = "A sequence-to-sequence aligner that accounts for template switches"
edition = "2024"
license = "BSD-2-Clause"
name = "tsalign"
readme = false
repository = "https://github.com/sebschmi/template-switch-aligner"
resolver = "2"
rust-version = "1.85.1"
version = "0.21.0"