tru-ols 0.1.1

Command-line tool for TRU-OLS flow cytometry unmixing
Documentation 
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//! Configuration management for TRU-OLS CLI

use serde::{Deserialize, Serialize};

/// Configuration for TRU-OLS unmixing
#[derive(Debug, Clone, Serialize, Deserialize)]
pub struct UnmixingConfig {
    /// Cutoff percentile for determining irrelevant endmembers
    pub cutoff_percentile: f64,

    /// Strategy for handling irrelevant abundances
    pub strategy: String,

    /// Autofluorescence endmember name
    pub autofluorescence: String,
}

impl Default for UnmixingConfig {
    fn default() -> Self {
        Self {
            cutoff_percentile: 0.995,
            strategy: "zero".to_string(),
            autofluorescence: "Autofluorescence".to_string(),
        }
    }
}