# Summary
[Introduction](./introduction.md)
# Getting Started
- [Overview](./getting-started/getting-started.md)
- [Installation](./getting-started/installation.md)
- [Quick Start (Local)](./getting-started/quick-start-local.md)
- [Quick Start (HPC/Slurm)](./getting-started/quick-start-hpc.md)
- [Quick Start (Remote Workers)](./getting-started/quick-start-remote.md)
# Core Documentation
- [Core Concepts](./core/concepts/index.md)
- [Architecture Overview](./core/concepts/architecture.md)
- [Network Connectivity](./core/concepts/network-connectivity.md)
- [Workflow Definition](./core/concepts/workflow-definition.md)
- [Job State Transitions](./core/concepts/job-states.md)
- [Dependency Resolution](./core/concepts/dependencies.md)
- [Job Runners](./core/concepts/job-runners.md)
- [Execution Modes](./core/concepts/execution-modes.md)
- [Parallelization Strategies](./core/concepts/parallelization.md)
- [Workflow Reinitialization](./core/concepts/reinitialization.md)
- [RO-Crate Provenance](./core/concepts/ro-crate.md)
- [Working with Workflows](./core/workflows/index.md)
- [Creating Workflows](./core/workflows/creating-workflows.md)
- [Workflow Specification Formats](./core/workflows/workflow-formats.md)
- [Visualizing Workflow Structure](./core/workflows/visualizing-workflows.md)
- [Exporting and Importing Workflows](./core/workflows/export-import-workflows.md)
- [Archiving Workflows](./core/workflows/archiving.md)
- [How-Tos](./core/how-to/index.md)
- [Run Inline Commands (torc exec)](./core/how-to/run-inline-commands.md)
- [Track Workflow Status](./core/how-to/track-workflow-status.md)
- [Cancel a Workflow](./core/how-to/cancel-workflow.md)
- [View Job Logs](./core/how-to/view-job-logs.md)
- [Debug a Failed Job](./core/how-to/debug-failed-job.md)
- [Set Up Authentication](./core/how-to/set-up-authentication.md)
- [Check Resource Utilization](./core/how-to/check-resource-utilization.md)
- [View Resource Plots](./core/how-to/view-resource-plots.md)
- [Prioritize Jobs](./core/how-to/prioritize-jobs.md)
- [Parameterize Jobs with Files](./core/how-to/parameterize-with-files.md)
- [Use Invocation Scripts](./core/how-to/use-invocation-script.md)
- [Add RO-Crate Metadata](./core/how-to/ro-crate-metadata.md)
- [Tutorials](./core/tutorials/index.md)
- [Many Independent Jobs](./core/tutorials/many-jobs.md)
- [Diamond Workflow](./core/tutorials/diamond.md)
- [Simple Parameterization](./core/tutorials/simple-params.md)
- [Advanced Parameterization](./core/tutorials/advanced-params.md)
- [Multi-Stage Workflows with Barriers](./core/tutorials/multi-stage-barrier.md)
- [User Data Dependencies](./core/tutorials/user-data.md)
- [Monitoring & Debugging](./core/monitoring/index.md)
- [Web Dashboard](./core/monitoring/dashboard.md)
- [Terminal UI (TUI)](./core/monitoring/tui.md)
- [Workflow Reports](./core/monitoring/workflow-reports.md)
- [Resource Monitoring](./core/monitoring/resource-monitoring.md)
- [Debugging Workflows](./core/monitoring/debugging.md)
- [Working with Logs](./core/monitoring/working-with-logs.md)
- [Reference](./core/reference/index.md)
- [CLI Cheat Sheet](./core/reference/cli-cheatsheet.md)
- [CLI Reference](./core/reference/cli.md)
- [Workflow Specification](./core/reference/workflow-spec.md)
- [Job Parameterization](./core/reference/parameterization.md)
- [Resource Requirements](./core/reference/resources.md)
- [Environment Variables](./core/reference/environment-variables.md)
- [Resource Monitoring Database](./core/reference/resource-monitoring.md)
- [Configuration](./core/reference/configuration.md)
- [OpenAPI Specification](./core/reference/openapi.md)
---
# Execution Modes
- [HPC & Slurm](./specialized/hpc/index.md)
- [Slurm Overview](./specialized/hpc/slurm-workflows.md)
- [Submitting Slurm Workflows](./specialized/hpc/submit-slurm-workflow.md)
- [Multi-Node Jobs](./specialized/hpc/multi-node-jobs.md)
- [Advanced Slurm Configuration](./specialized/hpc/slurm.md)
- [Slurm Exit Codes](./specialized/hpc/slurm-exit-codes.md)
- [Debugging Slurm Workflows](./specialized/hpc/debugging-slurm.md)
- [HPC Profiles](./specialized/hpc/hpc-profiles.md)
- [HPC Profiles Reference](./specialized/hpc/hpc-profiles-reference.md)
- [HPC Deployment](./specialized/hpc/hpc-deployment.md)
- [Custom HPC Profile](./specialized/hpc/custom-hpc-profile.md)
- [Remote Workers](./specialized/remote/index.md)
- [Setting Up Remote Workers](./specialized/remote/remote-workers.md)
---
# Advanced Topics
- [Fault Tolerance & Recovery](./specialized/fault-tolerance/index.md)
- [Automatic Failure Recovery](./specialized/fault-tolerance/automatic-recovery.md)
- [Configurable Failure Handlers](./specialized/fault-tolerance/failure-handlers.md)
- [AI-Assisted Recovery](./specialized/fault-tolerance/ai-assisted-recovery.md)
- [Graceful Job Termination](./specialized/fault-tolerance/checkpointing.md)
- [Administration & Security](./specialized/admin/index.md)
- [Server Deployment](./specialized/admin/server-deployment.md)
- [Configuration Files](./specialized/admin/configuration-files.md)
- [Authentication](./specialized/admin/authentication.md)
- [TLS/HTTPS Configuration](./specialized/admin/tls-configuration.md)
- [Access Groups](./specialized/admin/access-groups.md)
- [Team-Based Access Control Tutorial](./specialized/admin/access-groups-tutorial.md)
- [Security Reference](./specialized/admin/security.md)
- [Tools & Integrations](./specialized/tools/index.md)
- [Workflow Wizard](./specialized/tools/workflow-wizard.md)
- [Configuration Files Tutorial](./specialized/tools/configuration.md)
- [Dashboard Deployment](./specialized/tools/dashboard-deployment.md)
- [Configuring AI Assistants](./specialized/tools/ai-assistants.md)
- [AI-Assisted Workflow Management](./specialized/tools/ai-assistant.md)
- [Map Python Functions Across Workers](./specialized/tools/map_python_function_across_workers.md)
- [Filtering CLI Output with Nushell](./specialized/tools/filtering-with-nushell.md)
- [Shell Completions](./specialized/tools/shell-completions.md)
- [Design & Architecture](./specialized/design/index.md)
- [Client Architecture](./specialized/design/client.md)
- [HTTP API Design](./specialized/design/http-api.md)
- [Workflow Actions](./specialized/design/workflow-actions.md)
- [Web Dashboard Design](./specialized/design/dashboard.md)
- [Server API Handler](./specialized/design/server.md)
- [Central Database](./specialized/design/database.md)
- [Workflow Recovery Design](./specialized/design/recovery.md)
- [Failure Handler Design](./specialized/design/failure-handlers.md)
- [AI-Assisted Recovery Design](./specialized/design/ai-assisted-recovery.md)
- [Workflow Graph](./specialized/design/workflow-graph.md)
- [Interface Architecture](./specialized/design/interfaces.md)
- [API Generation Architecture](./specialized/design/api-generation.md)
- [Slurm Job Step Monitoring](./specialized/design/srun-monitoring.md)
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[Contributing](./contributing.md) [Rust Developer Style Guide](./style-guide.md)