ternlang-core 0.3.3

Compiler and VM for Ternlang — balanced ternary language with affirm/tend/reject trit semantics, @sparseskip codegen, and BET bytecode execution.
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// Module:  stdlib/bio/mutation_track.tern
// Purpose: Genomic Mutation Classification
// Author:  RFI-IRFOS
// Ref:     https://ternlang.com

// Classifies mutations as beneficial, neutral, or deleterious.

fn mutation_impact_trit(synonymous: trit, protein_change: float) -> trit {
    // Synonymous mutations (no amino acid change) are neutral
    if synonymous == affirm { return tend; }
    
    // Non-synonymous changes
    if protein_change > 0.0 { return affirm; } // Adaptive
    if protein_change < 0.0 { return reject; } // Deleterious
    
    return tend; // Neutral drift
}

fn snp_detect_trit(reference_base: trit, sample_base: trit) -> trit {
    // Single Nucleotide Polymorphism
    if reference_base == sample_base { return reject; } // No mutation
    if sample_base == tend { return tend; } // Low read quality
    return affirm; // SNP Detected
}