termal-alignment 0.2.0

Alignment parsing and metrics for the termal multiple-sequence-alignment viewer
Documentation 
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>JPNFFBMG_00975 Oxalyl-CoA decarboxylase
------------MSTT-------------------------
>FMNIGCAI_01562 Oxalyl-CoA decarboxylase
------------MSTT-----------------------TN
>JHNJIINN_00718 Oxalyl-CoA decarboxylase
------------MENT-----------------------TC
>BPCAMGGF_01341 Oxalyl-CoA decarboxylase
------------MSTT-----------------------AN
>EINLENDL_00199 Oxalyl-CoA decarboxylase
------------META----------------------DNK
>LEACOLDL_00094 Oxalyl-CoA decarboxylase
------------MSDT-----------------------NS
>JIFGGMGC_00515 Oxalyl-CoA decarboxylase
------------MATT-----------------------DI
>PGMANCIO_01061 Oxalyl-CoA decarboxylase
------------MTTSQ----------------------NT
>GPHAMGHC_01723 Oxalyl-CoA decarboxylase
------------MSNED----------------------NV
>LHPAICNH_01638 Oxalyl-CoA decarboxylase
------------MNSMA----------------------VK
>HGHCDADN_01828 Oxalyl-CoA decarboxylase
------------MTQDV------------------------
>NDKPGHOA_00848 Oxalyl-CoA decarboxylase
------------MVDDSL-----------------------
>FGDGKIFP_01766 Oxalyl-CoA decarboxylase
------------MNLKCKMKAFLGFLKEGFFVVD-------
>MODHFIIH_01560 Oxalyl-CoA decarboxylase
------------MTDET----------------------TT
>FIAOOHFG_00839 Oxalyl-CoA decarboxylase
------------MSTDQ------------------------
>LCKICBJP_00132 Oxalyl-CoA decarboxylase
------------MTTRS------------------------
>DCDHNMCP_00664 Oxalyl-CoA decarboxylase
-----------------------------------------
>KCHCLCAP_00981 Oxalyl-CoA decarboxylase
------------MANES------------------------
>HCCLKPDO_01769 Oxalyl-CoA decarboxylase
------------MENNS------------------------
>GMLGPEOL_01693 Oxalyl-CoA decarboxylase
------------MSNDD----------------------NV
>NGHDOLJN_01895 Oxalyl-CoA decarboxylase
------------MSDQL------------------------
>FMNGEOKO_01111 Oxalyl-CoA decarboxylase
------------MSTDQ----------------------TQ
>KLIKOGBN_01027 Oxalyl-CoA decarboxylase
------------MTDEN----------------------EN
>NBPBBOKD_00111 Oxalyl-CoA decarboxylase
------------MSADQ----------------------TQ
>NBPBBOKD_00554 Oxalyl-CoA decarboxylase
------------MSADQ----------------------TQ
>GIOLJIEL_01671 Oxalyl-CoA decarboxylase
------------MSNDD----------------------NV
>JFBDNEAF_00473 Oxalyl-CoA decarboxylase
------------MADNT------------------------
>HJPOCLOA_01743 Oxalyl-CoA decarboxylase
-----------------------------------------
>HBDHIFBD_02555 Oxalyl-CoA decarboxylase
------------MENTK---------------------DNK
>GPDAHGED_00895 Oxalyl-CoA decarboxylase
------------MSTT-------------------------
>ADDAOGDK_00251 Oxalyl-CoA decarboxylase
------------MNATA----------------------NT
>KMGNJJLM_01854 Oxalyl-CoA decarboxylase
------------MKNT-----------------------TP
>IGAIDFEL_00293 Oxalyl-CoA decarboxylase
------------MSTT-----------------------S-
>ABLKBALL_00995 Oxalyl-CoA decarboxylase
------------MDTTN------------------------
>EAMGMNAO_01167 Oxalyl-CoA decarboxylase
------------MNTS-----------------------TS
>OOMDPHOG_01024 Oxalyl-CoA decarboxylase
------------MANES------------------------
>EIBDBCNL_00973 Oxalyl-CoA decarboxylase
------------MATT-----------------------SQ
>EGLNCLOM_01941 Oxalyl-CoA decarboxylase
------------MATT-----------------------TP
>FKOKIENJ_01885 Oxalyl-CoA decarboxylase
------------MTTT-----------------------NP
>CHEHLMHF_01118 Oxalyl-CoA decarboxylase
------------MSADQ----------------------TQ
>CFDBBMDM_02129 Oxalyl-CoA decarboxylase
------------MTTT-----------------------TN
>IFHHIDEL_00344 Oxalyl-CoA decarboxylase
------------MDAT-----------------------KN
>MJGAOCBJ_00877 Oxalyl-CoA decarboxylase
------------MEDNT------------------------
>PHHGNIMK_02218 Oxalyl-CoA decarboxylase
------------MQDTTK--------------------TNT
>OEBBIOPF_00348 Oxalyl-CoA decarboxylase
------------MATTTP--------------------SNN
>NOMFBFGD_00249 Oxalyl-CoA decarboxylase
------------MNNT----------------------TPN
>NNGLFABA_01296 Oxalyl-CoA decarboxylase
-----------------------------------------
>FAPJGJPM_00229 Oxalyl-CoA decarboxylase
------------MATT-------------------------
>NHFGFPNH_01146 Oxalyl-CoA decarboxylase
------------MSDT-----------------------TN
>NDNFAFHA_00880 Oxalyl-CoA decarboxylase
------------MSTT-----------------------PV
>HDIJNAAE_00283 Oxalyl-CoA decarboxylase
------------MEITN----------------------TT
>BDIAOLNG_00729 Oxalyl-CoA decarboxylase
-----------------------------------------
>HFIEDFIC_00035 Oxalyl-CoA decarboxylase
------------MATT-----------------------NT
>EJAGKEID_00239 Oxalyl-CoA decarboxylase
------------MGNT-----------------------TC
>LIDLHCCK_00542 Oxalyl-CoA decarboxylase
------------MSTT-----------------------PI
>KJLIEHKI_00734 Oxalyl-CoA decarboxylase
------------MTNT-----------------------AN
>DJNKGEHM_01711 Oxalyl-CoA decarboxylase
------------MSTT-----------------------PS
>JNBHLLPA_01758 Oxalyl-CoA decarboxylase
------------MAQTA----------------------VK
>IJPAKOKH_01396 Oxalyl-CoA decarboxylase
------------MATT-----------------------NP
>KDKIFONI_01577 Oxalyl-CoA decarboxylase
------------MSNED----------------------NV
>PKHMHAJP_01885 Oxalyl-CoA decarboxylase
------------MDNT-----------------------TN
>IGEEDBPI_01097 Oxalyl-CoA decarboxylase
------------MADNA------------------------
>JCFNHNLM_01606 Oxalyl-CoA decarboxylase
------------MSVT-----------------------NN
>HLNMKONP_00236 Oxalyl-CoA decarboxylase
-----------------------------------------
>ENIADIJO_01219 Oxalyl-CoA decarboxylase
------------MSNT-----------------------ST
>MOHAHGIK_01755 Oxalyl-CoA decarboxylase
------------MATT-------------------------
>HENILOKH_00386 Oxalyl-CoA decarboxylase
------------MAT------------------------NN
>HIEECKIE_01343 Oxalyl-CoA decarboxylase
------------MTTQ-----------------------TS
>JLLMGDPN_01035 Oxalyl-CoA decarboxylase
-----------------------------------------
>LGAIIJON_00429 Oxalyl-CoA decarboxylase
------------MENT-----------------------TC
>PFNPOCIF_00592 Oxalyl-CoA decarboxylase
-----------------------------------------
>AJOPMFPL_00806 Oxalyl-CoA decarboxylase
------------MSSVQ----------------------ND
>CJPMNMNL_00926 Oxalyl-CoA decarboxylase
------------MAVET----------------------TG
>PANGHNIH_01204 Oxalyl-CoA decarboxylase
------------MNAT-----------------------NN
>BONAMNLE_01679 Oxalyl-CoA decarboxylase
------------MATT-----------------------TS
>BDADPELO_01912 Oxalyl-CoA decarboxylase
------------MSNDD----------------------NV
>BGOIFLCB_00486 Oxalyl-CoA decarboxylase
------------MDTT-----------------------NN
>JHGMIBHM_01066 Oxalyl-CoA decarboxylase
------------MATT-----------------------PA
>DINGAIKK_00993 Oxalyl-CoA decarboxylase
------------MTTP-------------------------
>MOLANNKB_00994 Oxalyl-CoA decarboxylase
------------MADN-----------------------NN
>JEJBEHFJ_03152 Oxalyl-CoA decarboxylase
------------MENT-----------------------NN
>GABMBGAN_01631 Oxalyl-CoA decarboxylase
------------MENT-----------------------AN
>EOPPFDGF_01109 Oxalyl-CoA decarboxylase
------------MSTT-----------------------PA
>APAFLPDK_00174 Oxalyl-CoA decarboxylase
------------MENT-----------------------TC
>OMJIOHJL_00912 Oxalyl-CoA decarboxylase
------------MSTT-----------------------TA
>PKIMEOPJ_01006 Oxalyl-CoA decarboxylase
------------MDNT-----------------------KD
>GMKGBOCP_01594 Oxalyl-CoA decarboxylase
------------MQNT-----------------------PS
>FFNCBLAG_00188 Oxalyl-CoA decarboxylase
------------MTTT-----------------------PA
>NHGAIMNN_00497 Oxalyl-CoA decarboxylase
------------MDTS-----------------------NS
>KHNCIGCM_02316 Oxalyl-CoA decarboxylase
------------MATT-----------------------TT
>JJDKJFFO_00726 Oxalyl-CoA decarboxylase
-----------------------------------------
>PLCMNGNH_02076 Oxalyl-CoA decarboxylase
-----------------------------------------
>KFPGJCGM_01892 Oxalyl-CoA decarboxylase
------------MATT-----------------------PI
>NIGJJOJL_00324 Oxalyl-CoA decarboxylase
------------MATN-----------------------TN
>JNFEGOPI_01463 Oxalyl-CoA decarboxylase
------------MNATA----------------------NT
>BAIGCAGD_00439 Oxalyl-CoA decarboxylase
------------MSTT-----------------------AN
>LNKKJCOO_00315 Oxalyl-CoA decarboxylase
------------MSTNQ----------------------NQ
>PLJFMPDA_01896 Oxalyl-CoA decarboxylase
------------MSTT-----------------------S-
>FIFGAMFA_02261 Oxalyl-CoA decarboxylase
------------MATT-----------------------PS
>AMBMCLJK_01445 Oxalyl-CoA decarboxylase
------------MYID-------------------------
>JPGFOJLO_01578 Oxalyl-CoA decarboxylase
------------MTEEHADETMVA------------SMRAD
>IPCNAAIL_00475 Oxalyl-CoA decarboxylase
------------MVDDSL-----------------------
>FBHFIGPE_00086 Oxalyl-CoA decarboxylase
------------MANQ-----------------------PL
>OJKNLPKA_01748 Oxalyl-CoA decarboxylase
------------MSTSA----------------------TQ
>DDGIBBKD_00553 Oxalyl-CoA decarboxylase
------------MANE-----------------------TK
>BGHFCMBJ_00384 Oxalyl-CoA decarboxylase
------------MTTT-----------------------TN
>PDMNKFMG_01861 Oxalyl-CoA decarboxylase
------------MATT-------------------------
>IMIHMOLF_00884 Oxalyl-CoA decarboxylase
------------MENTNI--------------------KNK
>PMAJJKNG_01206 Oxalyl-CoA decarboxylase
------------MTQDI------------------------
>MFDJIOCA_01554 Oxalyl-CoA decarboxylase
------------MSTT-----------------------QP
>FIFKNOKD_00573 Oxalyl-CoA decarboxylase
------------MADS-----------------------TN
>GJOFPPEM_01387 Oxalyl-CoA decarboxylase
------------MATT-------------------------
>GKIBAOLK_01089 Oxalyl-CoA decarboxylase
------------MTDEN----------------------EN
>MIMDEFIM_02781 Oxalyl-CoA decarboxylase
------------MENT-----------------------TC
>JDOIHGNE_01486 Oxalyl-CoA decarboxylase
------------MGNT-----------------------TC
>PGNLFNAI_01810 Oxalyl-CoA decarboxylase
------------MSALA----------------------AQ
>GNKBFDDK_01135 Oxalyl-CoA decarboxylase
------------MATT-----------------------SQ
>JMDOFPME_00970 Oxalyl-CoA decarboxylase
------------MTTT-----------------------NP
>DCANLMPF_02714 Oxalyl-CoA decarboxylase
------------MLNTA----------------------TK
>BCKALBNH_00865 Oxalyl-CoA decarboxylase
------------MLTAA----------------------SK
>KLIAENJF_01077 Oxalyl-CoA decarboxylase
------------MVDKSL-----------------------
>EBCKHNGI_00231 Oxalyl-CoA decarboxylase
------------MVDDSL-----------------------
>BKNCBIGJ_00125 Oxalyl-CoA decarboxylase
------------MTPD-----------------------P-
>OMFFNFDM_00684 Oxalyl-CoA decarboxylase
------------MGKNDLM----------------------
>GAKKDFGP_01350 Oxalyl-CoA decarboxylase
------------MVDDSL-----------------------
>HPOMEGFB_00090 Oxalyl-CoA decarboxylase
------------MADV-----------------------NT
>FHGMACBC_01455 Oxalyl-CoA decarboxylase
------------MVDVS----------------------VT
>GHIDOJOE_00916 Oxalyl-CoA decarboxylase
------------MNTP-----------------------EI
>BJIFLFFM_01180 Oxalyl-CoA decarboxylase
------------MTTSQ----------------------NT
>COLILBEG_01778 Oxalyl-CoA decarboxylase
------------M----------------------------
>GEIHPLOJ_00939 Oxalyl-CoA decarboxylase
-----------------------------------------
>OMNI|NTL01BJ3157/16-570
-----------------------------------------
>OMNI|NTL01REA1201/18-572
-----------------------------------------
>OMNI|MSMEG_0157/19-572
-----------------------------------------
>OMNI|NTL03EC3262/6-559
-----------------------------------------
>OMNI|NTL01LA0379/4-557
-----------------------------------------
>P0AFI0|reviewed|Oxalyl-CoA decarboxylase|taxID:83333
------------MSDQL------------------------
>P0AFI1|reviewed|Oxalyl-CoA decarboxylase|taxID:83334
------------MSDQL------------------------
>P40149|reviewed|Oxalyl-CoA decarboxylase|taxID:847
------------MSNDD----------------------NV
>tr|A0A419SEU2|A0A419SEU2_9BACL Oxalyl-CoA decarboxylase OS=Ammoniphilus oxalaticus OX=66863 GN=BEP19_14240 PE=3 SV=1
------------MST--------------------------
>UPI0001A7BBF7 status=active
---------MFAMVDVS----------------------VT
>tr|B2T9D2|B2T9D2_PARPJ Oxalyl-CoA decarboxylase OS=Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN) OX=398527 GN=Bphyt_6740 PE=3 SV=1
------------MAEAD----------------------QP
>tr|Q0K0H7|Q0K0H7_CUPNH Oxalyl-CoA decarboxylase OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=H16_B1712 PE=3 SV=1
------------MAEVG----------------------NE
>tr|A0A375GQ18|A0A375GQ18_9BURK Oxalyl-CoA decarboxylase OS=Cupriavidus oxalaticus OX=96344 GN=oxc PE=3 SV=1
------------MAEVG----------------------NE
>tr|A0A4P7L498|A0A4P7L498_9BURK Oxalyl-CoA decarboxylase OS=Cupriavidus oxalaticus OX=96344 GN=oxc PE=3 SV=1
------------MAEVG----------------------NE
>sp|P0AFI0|OXC_ECOLI Oxalyl-CoA decarboxylase OS=Escherichia coli (strain K12) OX=83333 GN=oxc PE=1 SV=1
------------MSDQL------------------------
>UPI00019F65DC status=active
------------MNLKCKMKAFLGFLKEGFFVVD-------
>tr|C3XBB9|C3XBB9_OXAFO Oxalyl-CoA decarboxylase OS=Oxalobacter formigenes OXCC13 OX=556269 GN=oxc PE=3 SV=1
------------MSNDD----------------------NV
>tr|D4C5Q1|D4C5Q1_PRORE Oxalyl-CoA decarboxylase OS=Providencia rettgeri DSM 1131 OX=521000 GN=oxc PE=3 SV=1
------------MSADQ----------------------TQ
>tr|Q88DY8|Q88DY8_PSEPK Acetolactate synthase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=ilvI PE=3 SV=1
------------MEL--------------------------
>O58495|reviewed|Indolepyruvate oxidoreductase subunit IorA|taxID:70601
------------MVKVTDIVLWD------------------
>IBHMBFBB_00274
MAPAADALNTRHLTKEG----------------------TV
>IBHMBFBB_01454
------------MVDVS----------------------VT
>HEMGJFMD_00111
------------MTK--------------------------
>HEMGJFMD_00781
------------MNLKCKMKAFLGFLKEGFFVVD-------
>AHMKMHDK_01201
------------M----------------------------
>AHMKMHDK_01441
------------M----------------------------
>AHMKMHDK_03518
------------M----------------------------
>AHMKMHDK_03887
------------MNDLT------------------------
>AHMKMHDK_04471
------------MSK--------------------------
>AHMKMHDK_04890
------------MEL--------------------------
>CEFNMEKK_01241
-----------------------------------------
>CEFNMEKK_01320
------------MNMPS----------------------AE
>CEFNMEKK_01778
------------MAK--------------------------
>CEFNMEKK_02031
------------MAD--------------------------
>CEFNMEKK_02116
------------MTQNP----------------------NV
>CEFNMEKK_02807
------------MNQRVVH------------------HEAA
>CEFNMEKK_03136
------------M----------------------------
>CEFNMEKK_03903
------------M--------------------------SQ
>CEFNMEKK_04385
------------MSEQNPSPRD-----------------AT
>CEFNMEKK_06345
------------MESRA------------------------
>CEFNMEKK_06391
------------MAQ--------------------------
>CEFNMEKK_06740
------------MAEAD----------------------QP
>CEFNMEKK_07067
------------MFLEALH----------------------
>BNIANBDI_00111
------------MSADQ----------------------TQ
>BNIANBDI_00554
------------MSADQ----------------------TQ
>BNIANBDI_00902
-----------------------------------------
>BNIANBDI_01306
------------M----------------------------
>BNIANBDI_01764
------------MAK--------------------------
>BNIANBDI_01918
------------MEM--------------------------
>BNIANBDI_01959
------------M----------------------------
>BNIANBDI_02274
-----------MMSESG----------------------TT
>BNIANBDI_03901
------------MSE--------------------------
>CKNHMCOD_00282
------------MAK--------------------------
>CKNHMCOD_00457
------------MGTTAE-----------------------
>CKNHMCOD_00503
------------MSNDD----------------------NV
>CKNHMCOD_00549
------------MA---------------------------
>CKNHMCOD_01664
-----------------------------------------
>CKNHMCOD_02144
------------MSL--------------------------
>ILBLGBHP_00262
------------MAK--------------------------
>ILBLGBHP_01016
-----------MMKKRVYT----------------------
>ILBLGBHP_01319
------------MSRDS----------------------AL
>ILBLGBHP_02157
---------MGIMTLSIEVLKGLSCVK------DVEPFISK
>ILBLGBHP_03215
------------MST--------------------------
>IAGGDKJC_00498
------------MAEVG----------------------NE
>IAGGDKJC_00575
------------MRDLETTKQP-----------------AV
>IAGGDKJC_01690
------------MPNQHQY----------------------
>IAGGDKJC_01933
------------M--------------------------SQ
>IAGGDKJC_03067
------------MNMPS----------------------AE
>IAGGDKJC_03144
------------MAPIAP-----------------------
>IAGGDKJC_04103
------------MTFTPGH--------------------SN
>IAGGDKJC_05391
------------MAK--------------------------
>FHLODNDD_01044
------------MNMPS----------------------AE
>FHLODNDD_01121
------------MAISA------------------------
>FHLODNDD_02254
------------MSMTPANT-------------------TQ
>FHLODNDD_03621
------------MAK--------------------------
>FHLODNDD_04092
------------MTK--------------------------
>FHLODNDD_04523
------------MPNQQQY----------------------
>FHLODNDD_05522
------------MAEVG----------------------NE
>FHLODNDD_05681
------------MRDLDTTSNP-----------------AV
>FHLODNDD_06258
------------M--------------------------NH
>HJACHOPP_00651
------------MAEVG----------------------NE
>HJACHOPP_00765
------------MRDLETTKQP-----------------AV
>HJACHOPP_01797
------------M--------------------------NH
>HJACHOPP_02065
------------MPNQHQY----------------------
>HJACHOPP_03440
------------MNMPS----------------------AE
>HJACHOPP_04484
------------MTATPGH--------------------SN
>HJACHOPP_05889
------------MAK--------------------------
>KFJFDHAO_00293
------------M----------------------------
>KFJFDHAO_00642
------------MAK--------------------------
>KFJFDHAO_00985
------------MEM--------------------------
>KFJFDHAO_01716
-----------------------------------------
>KFJFDHAO_01717
-----------------------------------------
>KFJFDHAO_01812
------------MASSG----------------------TT
>KFJFDHAO_03103
------------MSDQL------------------------
>KFJFDHAO_03213
------------MSVSAFNRRW-------------------