spqr-tree 2.0.0

A representation of the SPQR tree in Rust with support for I/O
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
use std::iter;

use log::{debug, trace};
use smallvec::SmallVec;
use tagged_vec::TaggedVec;

use crate::{
    decomposition::{
        Block, Component, CutNode, SPQRDecomposition, SPQRDecompositionEdgeData,
        SPQRDecompositionNodeData, SPQREdge, SPQRNode, SPQRNodeType,
        indices::{
            BlockIndex, ComponentIndex, CutNodeIndex, OptionalBlockIndex, OptionalComponentIndex,
            OptionalCutNodeIndex, OptionalSPQRNodeIndex, SPQREdgeIndex, SPQRNodeIndex,
        },
    },
    graph::StaticGraph,
};

pub struct SPQRDecompositionBuilder<'graph, Graph: StaticGraph> {
    graph: &'graph Graph,
    components:
        TaggedVec<ComponentIndex<Graph::IndexType>, Component<Graph::NodeIndex, Graph::IndexType>>,
    blocks: TaggedVec<BlockIndex<Graph::IndexType>, Block<Graph::NodeIndex, Graph::IndexType>>,
    cut_nodes:
        TaggedVec<CutNodeIndex<Graph::IndexType>, CutNode<Graph::NodeIndex, Graph::IndexType>>,
    spqr_nodes: TaggedVec<
        SPQRNodeIndex<Graph::IndexType>,
        SPQRNode<Graph::NodeIndex, Graph::EdgeIndex, Graph::IndexType>,
    >,
    spqr_edges:
        TaggedVec<SPQREdgeIndex<Graph::IndexType>, SPQREdge<Graph::NodeIndex, Graph::IndexType>>,
    node_data: TaggedVec<Graph::NodeIndex, SPQRDecompositionNodeDataBuilder<Graph>>,
    edge_data: TaggedVec<Graph::EdgeIndex, SPQRDecompositionEdgeDataBuilder<Graph>>,
}

struct SPQRDecompositionNodeDataBuilder<Graph: StaticGraph> {
    component_index: OptionalComponentIndex<Graph::IndexType>,
    block_indices: SmallVec<[BlockIndex<Graph::IndexType>; 1]>,
    cut_node_index: OptionalCutNodeIndex<Graph::IndexType>,
    spqr_node_indices: SmallVec<[SPQRNodeIndex<Graph::IndexType>; 1]>,
    extra_data: String,
}

struct SPQRDecompositionEdgeDataBuilder<Graph: StaticGraph> {
    component_index: OptionalComponentIndex<Graph::IndexType>,
    block_index: OptionalBlockIndex<Graph::IndexType>,
    spqr_node_index: OptionalSPQRNodeIndex<Graph::IndexType>,
    extra_data: String,
}

impl<'graph, Graph: StaticGraph> SPQRDecompositionBuilder<'graph, Graph> {
    pub fn new(graph: &'graph Graph) -> Self {
        Self {
            graph,
            components: TaggedVec::new(),
            blocks: TaggedVec::new(),
            cut_nodes: TaggedVec::new(),
            spqr_nodes: TaggedVec::new(),
            spqr_edges: TaggedVec::new(),
            node_data: iter::repeat_with(|| SPQRDecompositionNodeDataBuilder {
                component_index: OptionalComponentIndex::new_none(),
                block_indices: SmallVec::new(),
                cut_node_index: OptionalCutNodeIndex::new_none(),
                spqr_node_indices: SmallVec::new(),
                extra_data: String::new(),
            })
            .take(graph.node_count())
            .collect(),
            edge_data: iter::repeat_with(|| SPQRDecompositionEdgeDataBuilder {
                component_index: OptionalComponentIndex::new_none(),
                block_index: OptionalBlockIndex::new_none(),
                spqr_node_index: OptionalSPQRNodeIndex::new_none(),
                extra_data: String::new(),
            })
            .take(graph.edge_count())
            .collect(),
        }
    }

    /// Adds a component to the decomposition.
    ///
    /// Edges are automatically assigned to the component based on their endpoints.
    pub fn add_component(
        &mut self,
        nodes: Vec<Graph::NodeIndex>,
    ) -> ComponentIndex<Graph::IndexType> {
        trace!("Adding component with {} nodes", nodes.len());
        assert!(!nodes.is_empty());

        self.components.push_in_place(|index| {
            for node in nodes.iter().copied() {
                assert!(self.node_data[node].component_index.is_none());
                self.node_data[node].component_index = index.into();

                for edge in self.graph.incident_edges(node) {
                    if self.edge_data[edge].component_index != Some(index).into() {
                        assert!(self.edge_data[edge].component_index.is_none());
                        self.edge_data[edge].component_index = index.into();
                    }
                }
            }

            trace!("Component added with index {index}");
            Component {
                nodes,
                blocks: Vec::new(),
                cut_nodes: Vec::new(),
            }
        })
    }

    /// Adds extra data to the given node.
    pub fn add_extra_data_to_node(&mut self, node: Graph::NodeIndex, extra_data: String) {
        assert!(self.node_data[node].extra_data.is_empty());
        self.node_data[node].extra_data = extra_data;
    }

    /// Adds a block into a component.
    ///
    /// Edges are automatically assigned to the block if both of their endpoints are in the block.
    /// Cut nodes are identified once [`build`](Self::build) is called.
    pub fn add_block(
        &mut self,
        component: ComponentIndex<Graph::IndexType>,
        nodes: Vec<Graph::NodeIndex>,
    ) -> BlockIndex<Graph::IndexType> {
        assert!(!nodes.is_empty());

        self.blocks.push_in_place(|index| {
            self.components[component].blocks.push(index);

            for node in nodes.iter().copied() {
                assert_eq!(self.node_data[node].component_index, Some(component).into());
                assert!(!self.node_data[node].block_indices.contains(&index));
                self.node_data[node].block_indices.push(index);
            }

            for node in nodes.iter().copied() {
                for edge in self.graph.incident_edges(node) {
                    if self.edge_data[edge].block_index != Some(index).into() {
                        let (a, b) = self.graph.edge_endpoints(edge);

                        if self.node_data[a].block_indices.contains(&index)
                            && self.node_data[b].block_indices.contains(&index)
                        {
                            // Both endpoints are in the block, so the edge must be in the block.
                            assert!(self.edge_data[edge].block_index.is_none());
                            self.edge_data[edge].block_index = index.into();
                        }
                    }
                }
            }

            Block {
                component,
                nodes,
                cut_nodes: Vec::new(),
                spqr_nodes: Vec::new(),
                spqr_edges: Vec::new(),
            }
        })
    }

    /// Manually add a cut node to the decomposition.
    pub fn add_cut_node(
        &mut self,
        cut_node: Graph::NodeIndex,
        blocks: Vec<BlockIndex<Graph::IndexType>>,
    ) -> CutNodeIndex<Graph::IndexType> {
        assert!(!blocks.is_empty());

        self.cut_nodes.push_in_place(|cut_node_index| {
            assert!(self.node_data[cut_node].cut_node_index.is_none());
            self.node_data[cut_node].cut_node_index = Some(cut_node_index).into();

            let component_index = self.node_data[cut_node].component_index.unwrap();

            self.components[component_index]
                .cut_nodes
                .push(cut_node_index);

            for block_index in blocks.iter().copied() {
                debug_assert!(!self.blocks[block_index].cut_nodes.contains(&cut_node_index));
                self.blocks[block_index].cut_nodes.push(cut_node_index);
            }

            CutNode {
                component: component_index,
                node: cut_node,
                adjacent_blocks: blocks.into(),
            }
        })
    }

    /// Adds an SPQR node into a block.
    ///
    /// Edges are not added to the component and must be added separately.
    pub fn add_spqr_node(
        &mut self,
        block: BlockIndex<Graph::IndexType>,
        nodes: Vec<Graph::NodeIndex>,
        spqr_node_type: SPQRNodeType,
    ) -> SPQRNodeIndex<Graph::IndexType> {
        assert!(nodes.len() >= 2);

        self.spqr_nodes.push_in_place(|index| {
            self.blocks[block].spqr_nodes.push(index);

            for node in nodes.iter().copied() {
                assert_eq!(
                    self.node_data[node].component_index,
                    self.blocks[block].component.into()
                );
                assert!(self.node_data[node].block_indices.contains(&block));
                assert!(!self.node_data[node].spqr_node_indices.contains(&index));
                self.node_data[node].spqr_node_indices.push(index);
            }

            SPQRNode {
                block,
                nodes,
                edges: Vec::new(),
                spqr_node_type,
                spqr_edges: SmallVec::new(),
            }
        })
    }

    /// Adds an edge into an SPQR node.
    ///
    /// These edges are Q-nodes in some interpretations of the SPQR tree.
    pub fn add_edge_to_spqr_node(
        &mut self,
        edge: Graph::EdgeIndex,
        spqr_node: SPQRNodeIndex<Graph::IndexType>,
    ) {
        assert!(self.edge_data[edge].spqr_node_index.is_none());

        let (a, b) = self.graph.edge_endpoints(edge);
        assert!(self.node_data[a].spqr_node_indices.contains(&spqr_node));
        assert!(self.node_data[b].spqr_node_indices.contains(&spqr_node));

        self.edge_data[edge].spqr_node_index = spqr_node.into();
        self.spqr_nodes[spqr_node].edges.push(edge);
    }

    /// Adds an edge to the SPQR tree.
    ///
    /// These edges connect two SPQR nodes `endpoints` and correspond to the virtual edge `virtual_edge` in the two SPQR nodes.
    ///
    /// If the block index is `None`, it is inferred from the SPQR nodes.
    pub fn add_spqr_edge(
        &mut self,
        block: OptionalBlockIndex<Graph::IndexType>,
        endpoints: (
            SPQRNodeIndex<Graph::IndexType>,
            SPQRNodeIndex<Graph::IndexType>,
        ),
        virtual_edge: (Graph::NodeIndex, Graph::NodeIndex),
    ) -> SPQREdgeIndex<Graph::IndexType> {
        let block = block.unwrap_or_else(|| {
            let block_u = self.spqr_nodes[endpoints.0].block;
            let block_v = self.spqr_nodes[endpoints.1].block;
            assert_eq!(block_u, block_v);
            block_u
        });

        self.spqr_edges.push_in_place(|index| {
            assert_eq!(self.spqr_nodes[endpoints.0].block, block);
            assert_eq!(self.spqr_nodes[endpoints.1].block, block);
            self.blocks[block].spqr_edges.push(index);

            assert!(
                self.node_data[virtual_edge.0]
                    .spqr_node_indices
                    .contains(&endpoints.0)
            );
            assert!(
                self.node_data[virtual_edge.0]
                    .spqr_node_indices
                    .contains(&endpoints.1)
            );
            assert!(
                self.node_data[virtual_edge.1]
                    .spqr_node_indices
                    .contains(&endpoints.0)
            );
            assert!(
                self.node_data[virtual_edge.1]
                    .spqr_node_indices
                    .contains(&endpoints.1)
            );

            assert!(!self.spqr_nodes[endpoints.0].spqr_edges.contains(&index));
            assert!(!self.spqr_nodes[endpoints.1].spqr_edges.contains(&index));
            self.spqr_nodes[endpoints.0].spqr_edges.push(index);
            self.spqr_nodes[endpoints.1].spqr_edges.push(index);

            SPQREdge {
                endpoints,
                virtual_edge,
            }
        })
    }

    /// Finalize the SPQR decomposition.
    ///
    /// This method performs some sanity checks and identifies remaining cut nodes.
    pub fn build(mut self) -> SPQRDecomposition<'graph, Graph> {
        debug!("Finalizing SPQR decomposition...");

        // Ensure that all nodes have actually been assigned to components, blocks, and SPQR nodes.
        for node_index in self.graph.node_indices() {
            let SPQRDecompositionNodeDataBuilder {
                component_index,
                block_indices,
                spqr_node_indices,
                ..
            } = &self.node_data[node_index];

            debug_assert!(component_index.is_some());
            debug_assert!(!block_indices.is_empty());
            // Blocks containing a single node cannot contain SPQR nodes.
            debug_assert!(
                !spqr_node_indices.is_empty()
                    || block_indices
                        .iter()
                        .all(|block_index| self.blocks[*block_index].node_count() == 1)
            );
        }

        // Ensure that all edges have actually been assigned to components, blocks, and SPQR nodes.
        for edge_index in self.graph.edge_indices() {
            let SPQRDecompositionEdgeDataBuilder {
                component_index,
                block_index,
                spqr_node_index,
                ..
            } = &self.edge_data[edge_index];

            debug_assert!(component_index.is_some());
            debug_assert!(block_index.is_some());
            // Blocks containing a single node cannot contain SPQR nodes.
            debug_assert!(
                spqr_node_index.is_some() || self.blocks[block_index.unwrap()].node_count() == 1
            );
        }

        // Identify cut nodes.
        for node_index in self.graph.node_indices() {
            if self.node_data[node_index].cut_node_index.is_some() {
                // Skip nodes that are already declared as cut nodes.
                continue;
            }

            let block_indices = &self.node_data[node_index].block_indices;

            // Nodes in multiple blocks are cut nodes.
            if block_indices.len() >= 2 {
                let block_indices: SmallVec<_> = block_indices.iter().copied().collect();
                let component_index = self.node_data[node_index].component_index.unwrap();

                self.cut_nodes.push_in_place(|cut_node_index| {
                    self.components[component_index]
                        .cut_nodes
                        .push(cut_node_index);

                    for block_index in block_indices.iter().copied() {
                        debug_assert!(
                            !self.blocks[block_index].cut_nodes.contains(&cut_node_index),
                        );
                        self.blocks[block_index].cut_nodes.push(cut_node_index);
                    }

                    assert!(self.node_data[node_index].cut_node_index.is_none());
                    self.node_data[node_index].cut_node_index = Some(cut_node_index).into();

                    CutNode {
                        component: component_index,
                        node: node_index,
                        adjacent_blocks: block_indices,
                    }
                });
            }
        }

        debug!("SPQR decomposition finalized.");
        SPQRDecomposition {
            graph: self.graph,
            components: self.components,
            blocks: self.blocks,
            cut_nodes: self.cut_nodes,
            spqr_nodes: self.spqr_nodes,
            spqr_edges: self.spqr_edges,
            node_data: self
                .node_data
                .into_values_iter()
                .map(SPQRDecompositionNodeDataBuilder::build)
                .collect(),
            edge_data: self
                .edge_data
                .into_values_iter()
                .map(SPQRDecompositionEdgeDataBuilder::build)
                .collect(),
        }
    }

    /// Returns the block index of the given SPQR node.
    pub fn spqr_node_block_index(
        &self,
        spqr_node_index: SPQRNodeIndex<Graph::IndexType>,
    ) -> BlockIndex<Graph::IndexType> {
        self.spqr_nodes[spqr_node_index].block
    }
}

impl<Graph: StaticGraph> SPQRDecompositionNodeDataBuilder<Graph> {
    fn build(self) -> SPQRDecompositionNodeData<Graph::IndexType> {
        SPQRDecompositionNodeData {
            component_index: self.component_index.unwrap(),
            block_indices: self.block_indices,
            cut_node_index: self.cut_node_index,
            spqr_node_indices: self.spqr_node_indices,
            extra_data: self.extra_data,
        }
    }
}

impl<Graph: StaticGraph> SPQRDecompositionEdgeDataBuilder<Graph> {
    fn build(self) -> SPQRDecompositionEdgeData<Graph::IndexType> {
        SPQRDecompositionEdgeData {
            component_index: self.component_index.unwrap(),
            block_index: self.block_index.unwrap(),
            spqr_node_index: self.spqr_node_index,
            extra_data: self.extra_data,
        }
    }
}