spoars 0.1.3

Faithful native-Rust reimplementation of the spoa partial order alignment library
Documentation 
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
rust-version = "1.85"
name = "spoars"
version = "0.1.3"
build = false
exclude = [
    "third_party/**",
    "oracle/**",
    ".github/**",
    "scripts/**",
    "RELAY.md",
    "spoars-py/**",
]
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Faithful native-Rust reimplementation of the spoa partial order alignment library"
homepage = "https://github.com/fg-labs/spoars"
documentation = "https://docs.rs/spoars"
readme = "README.md"
keywords = [
    "bioinformatics",
    "poa",
    "alignment",
    "consensus",
    "msa",
]
categories = [
    "science",
    "algorithms",
]
license = "MIT"
repository = "https://github.com/fg-labs/spoars"

[features]
cli = ["dep:needletail"]
default = ["cli"]
serde = ["dep:serde"]

[lib]
name = "spoars"
path = "src/lib.rs"

[[bin]]
name = "spoars"
path = "src/bin/spoars.rs"
required-features = ["cli"]

[[example]]
name = "profile_align"
path = "examples/profile_align.rs"

[[example]]
name = "profile_family"
path = "examples/profile_family.rs"

[[test]]
name = "banded_parity"
path = "tests/banded_parity.rs"

[[test]]
name = "cli_parity"
path = "tests/cli_parity.rs"

[[test]]
name = "consensus_summary_parity"
path = "tests/consensus_summary_parity.rs"

[[test]]
name = "engine_parity"
path = "tests/engine_parity.rs"

[[test]]
name = "graph_parity"
path = "tests/graph_parity.rs"

[[test]]
name = "oracle_harness"
path = "tests/oracle_harness.rs"

[[test]]
name = "serde_roundtrip"
path = "tests/serde_roundtrip.rs"

[[test]]
name = "simd_bench"
path = "tests/simd_bench.rs"

[[test]]
name = "simd_parity"
path = "tests/simd_parity.rs"

[[test]]
name = "subgraph_parity"
path = "tests/subgraph_parity.rs"

[[bench]]
name = "poa"
path = "benches/poa.rs"
harness = false

[dependencies.needletail]
version = "0.7"
optional = true

[dependencies.serde]
version = "1"
features = ["derive"]
optional = true

[dev-dependencies.criterion]
version = "0.8"

[dev-dependencies.needletail]
version = "0.7"

[dev-dependencies.proptest]
version = "1"

[dev-dependencies.serde]
version = "1"
features = ["derive"]

[dev-dependencies.serde_json]
version = "1"