version = 3
[[package]]
name = "aho-corasick"
version = "0.7.20"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "cc936419f96fa211c1b9166887b38e5e40b19958e5b895be7c1f93adec7071ac"
dependencies = [
"memchr",
]
[[package]]
name = "anyhow"
version = "1.0.68"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2cb2f989d18dd141ab8ae82f64d1a8cdd37e0840f73a406896cf5e99502fab61"
[[package]]
name = "assert_fs"
version = "1.0.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1429b32ede0cb31afd9f6cb1e8f06f1e32a4c75ed9290f9f4d3cda0c5981e061"
dependencies = [
"doc-comment",
"globwalk",
"predicates",
"predicates-core",
"predicates-tree",
"tempfile",
]
[[package]]
name = "bindgen"
version = "0.63.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "36d860121800b2a9a94f9b5604b332d5cffb234ce17609ea479d723dbc9d3885"
dependencies = [
"bitflags",
"cexpr",
"clang-sys",
"lazy_static",
"lazycell",
"log",
"peeking_take_while",
"proc-macro2",
"quote",
"regex",
"rustc-hash",
"shlex",
"syn",
"which",
]
[[package]]
name = "bitflags"
version = "1.3.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bef38d45163c2f1dde094a7dfd33ccf595c92905c8f8f4fdc18d06fb1037718a"
[[package]]
name = "bstr"
version = "0.2.17"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ba3569f383e8f1598449f1a423e72e99569137b47740b1da11ef19af3d5c3223"
dependencies = [
"memchr",
]
[[package]]
name = "cc"
version = "1.0.77"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e9f73505338f7d905b19d18738976aae232eb46b8efc15554ffc56deb5d9ebe4"
dependencies = [
"jobserver",
]
[[package]]
name = "cexpr"
version = "0.6.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6fac387a98bb7c37292057cffc56d62ecb629900026402633ae9160df93a8766"
dependencies = [
"nom",
]
[[package]]
name = "cfg-if"
version = "1.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd"
[[package]]
name = "clang-sys"
version = "1.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fa2e27ae6ab525c3d369ded447057bca5438d86dc3a68f6faafb8269ba82ebf3"
dependencies = [
"glob",
"libc",
"libloading",
]
[[package]]
name = "cmake"
version = "0.1.49"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "db34956e100b30725f2eb215f90d4871051239535632f84fea3bc92722c66b7c"
dependencies = [
"cc",
]
[[package]]
name = "crossbeam-utils"
version = "0.8.14"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4fb766fa798726286dbbb842f174001dab8abc7b627a1dd86e0b7222a95d929f"
dependencies = [
"cfg-if",
]
[[package]]
name = "cstr"
version = "0.2.11"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8aa998c33a6d3271e3678950a22134cd7dd27cef86dee1b611b5b14207d1d90b"
dependencies = [
"proc-macro2",
"quote",
]
[[package]]
name = "difflib"
version = "0.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6184e33543162437515c2e2b48714794e37845ec9851711914eec9d308f6ebe8"
[[package]]
name = "doc-comment"
version = "0.3.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fea41bba32d969b513997752735605054bc0dfa92b4c56bf1189f2e174be7a10"
[[package]]
name = "dunce"
version = "1.0.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0bd4b30a6560bbd9b4620f4de34c3f14f60848e58a9b7216801afcb4c7b31c3c"
[[package]]
name = "either"
version = "1.8.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "90e5c1c8368803113bf0c9584fc495a58b86dc8a29edbf8fe877d21d9507e797"
[[package]]
name = "fastrand"
version = "1.8.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a7a407cfaa3385c4ae6b23e84623d48c2798d06e3e6a1878f7f59f17b3f86499"
dependencies = [
"instant",
]
[[package]]
name = "fnv"
version = "1.0.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3f9eec918d3f24069decb9af1554cad7c880e2da24a9afd88aca000531ab82c1"
[[package]]
name = "form_urlencoded"
version = "1.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a9c384f161156f5260c24a097c56119f9be8c798586aecc13afbcbe7b7e26bf8"
dependencies = [
"percent-encoding",
]
[[package]]
name = "glob"
version = "0.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9b919933a397b79c37e33b77bb2aa3dc8eb6e165ad809e58ff75bc7db2e34574"
[[package]]
name = "globset"
version = "0.4.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0a1e17342619edbc21a964c2afbeb6c820c6a2560032872f397bb97ea127bd0a"
dependencies = [
"aho-corasick",
"bstr",
"fnv",
"log",
"regex",
]
[[package]]
name = "globwalk"
version = "0.8.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "93e3af942408868f6934a7b85134a3230832b9977cf66125df2f9edcfce4ddcc"
dependencies = [
"bitflags",
"ignore",
"walkdir",
]
[[package]]
name = "idna"
version = "0.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e14ddfc70884202db2244c223200c204c2bda1bc6e0998d11b5e024d657209e6"
dependencies = [
"unicode-bidi",
"unicode-normalization",
]
[[package]]
name = "ignore"
version = "0.4.18"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "713f1b139373f96a2e0ce3ac931cd01ee973c3c5dd7c40c0c2efe96ad2b6751d"
dependencies = [
"crossbeam-utils",
"globset",
"lazy_static",
"log",
"memchr",
"regex",
"same-file",
"thread_local",
"walkdir",
"winapi-util",
]
[[package]]
name = "instant"
version = "0.1.12"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7a5bbe824c507c5da5956355e86a746d82e0e1464f65d862cc5e71da70e94b2c"
dependencies = [
"cfg-if",
]
[[package]]
name = "itertools"
version = "0.10.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b0fd2260e829bddf4cb6ea802289de2f86d6a7a690192fbe91b3f46e0f2c8473"
dependencies = [
"either",
]
[[package]]
name = "jobserver"
version = "0.1.25"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "068b1ee6743e4d11fb9c6a1e6064b3693a1b600e7f5f5988047d98b3dc9fb90b"
dependencies = [
"libc",
]
[[package]]
name = "lazy_static"
version = "1.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e2abad23fbc42b3700f2f279844dc832adb2b2eb069b2df918f455c4e18cc646"
[[package]]
name = "lazycell"
version = "1.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "830d08ce1d1d941e6b30645f1a0eb5643013d835ce3779a5fc208261dbe10f55"
[[package]]
name = "libc"
version = "0.2.137"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fc7fcc620a3bff7cdd7a365be3376c97191aeaccc2a603e600951e452615bf89"
[[package]]
name = "libloading"
version = "0.7.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b67380fd3b2fbe7527a606e18729d21c6f3951633d0500574c4dc22d2d638b9f"
dependencies = [
"cfg-if",
"winapi",
]
[[package]]
name = "libz-sys"
version = "1.1.8"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9702761c3935f8cc2f101793272e202c72b99da8f4224a19ddcf1279a6450bbf"
dependencies = [
"cc",
"cmake",
"libc",
"pkg-config",
"vcpkg",
]
[[package]]
name = "log"
version = "0.4.17"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "abb12e687cfb44aa40f41fc3978ef76448f9b6038cad6aef4259d3c095a2382e"
dependencies = [
"cfg-if",
]
[[package]]
name = "memchr"
version = "2.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2dffe52ecf27772e601905b7522cb4ef790d2cc203488bbd0e2fe85fcb74566d"
[[package]]
name = "minimal-lexical"
version = "0.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "68354c5c6bd36d73ff3feceb05efa59b6acb7626617f4962be322a825e61f79a"
[[package]]
name = "nom"
version = "7.1.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a8903e5a29a317527874d0402f867152a3d21c908bb0b933e416c65e301d4c36"
dependencies = [
"memchr",
"minimal-lexical",
]
[[package]]
name = "once_cell"
version = "1.16.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "86f0b0d4bf799edbc74508c1e8bf170ff5f41238e5f8225603ca7caaae2b7860"
[[package]]
name = "paste"
version = "1.0.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b1de2e551fb905ac83f73f7aedf2f0cb4a0da7e35efa24a202a936269f1f18e1"
[[package]]
name = "peeking_take_while"
version = "0.1.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "19b17cddbe7ec3f8bc800887bab5e717348c95ea2ca0b1bf0837fb964dc67099"
[[package]]
name = "percent-encoding"
version = "2.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "478c572c3d73181ff3c2539045f6eb99e5491218eae919370993b890cdbdd98e"
[[package]]
name = "pkg-config"
version = "0.3.26"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6ac9a59f73473f1b8d852421e59e64809f025994837ef743615c6d0c5b305160"
[[package]]
name = "predicates"
version = "2.1.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ed6bd09a7f7e68f3f0bf710fb7ab9c4615a488b58b5f653382a687701e458c92"
dependencies = [
"difflib",
"itertools",
"predicates-core",
]
[[package]]
name = "predicates-core"
version = "1.0.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "72f883590242d3c6fc5bf50299011695fa6590c2c70eac95ee1bdb9a733ad1a2"
[[package]]
name = "predicates-tree"
version = "1.0.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "54ff541861505aabf6ea722d2131ee980b8276e10a1297b94e896dd8b621850d"
dependencies = [
"predicates-core",
"termtree",
]
[[package]]
name = "proc-macro2"
version = "1.0.47"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5ea3d908b0e36316caf9e9e2c4625cdde190a7e6f440d794667ed17a1855e725"
dependencies = [
"unicode-ident",
]
[[package]]
name = "pulldown-cmark"
version = "0.8.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ffade02495f22453cd593159ea2f59827aae7f53fa8323f756799b670881dcf8"
dependencies = [
"bitflags",
"memchr",
"unicase",
]
[[package]]
name = "quote"
version = "1.0.21"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bbe448f377a7d6961e30f5955f9b8d106c3f5e449d493ee1b125c1d43c2b5179"
dependencies = [
"proc-macro2",
]
[[package]]
name = "redox_syscall"
version = "0.2.16"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fb5a58c1855b4b6819d59012155603f0b22ad30cad752600aadfcb695265519a"
dependencies = [
"bitflags",
]
[[package]]
name = "regex"
version = "1.7.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e076559ef8e241f2ae3479e36f97bd5741c0330689e217ad51ce2c76808b868a"
dependencies = [
"aho-corasick",
"memchr",
"regex-syntax",
]
[[package]]
name = "regex-syntax"
version = "0.6.28"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "456c603be3e8d448b072f410900c09faf164fbce2d480456f50eea6e25f9c848"
[[package]]
name = "remove_dir_all"
version = "0.5.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3acd125665422973a33ac9d3dd2df85edad0f4ae9b00dafb1a05e43a9f5ef8e7"
dependencies = [
"winapi",
]
[[package]]
name = "rustc-hash"
version = "1.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "08d43f7aa6b08d49f382cde6a7982047c3426db949b1424bc4b7ec9ae12c6ce2"
[[package]]
name = "same-file"
version = "1.0.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "93fc1dc3aaa9bfed95e02e6eadabb4baf7e3078b0bd1b4d7b6b0b68378900502"
dependencies = [
"winapi-util",
]
[[package]]
name = "semver"
version = "1.0.14"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e25dfac463d778e353db5be2449d1cce89bd6fd23c9f1ea21310ce6e5a1b29c4"
[[package]]
name = "serde"
version = "1.0.152"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bb7d1f0d3021d347a83e556fc4683dea2ea09d87bccdf88ff5c12545d89d5efb"
[[package]]
name = "serde_test"
version = "1.0.152"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3611210d2d67e3513204742004d6ac6f589e521861dabb0f649b070eea8bed9e"
dependencies = [
"serde",
]
[[package]]
name = "shlex"
version = "1.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "43b2853a4d09f215c24cc5489c992ce46052d359b5109343cbafbf26bc62f8a3"
[[package]]
name = "slow5"
version = "0.10.0"
dependencies = [
"anyhow",
"assert_fs",
"cstr",
"doc-comment",
"libc",
"log",
"paste",
"serde",
"serde_test",
"slow5lib-sys",
"thiserror",
"version-sync",
]
[[package]]
name = "slow5lib-sys"
version = "0.8.0+slow5lib.0.8.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "dafb8e9ceb8da34bf69bb13822e93f62549d52658855e163946bed2bae51dd21"
dependencies = [
"bindgen",
"cc",
"dunce",
"libc",
"libz-sys",
"zstd-sys",
]
[[package]]
name = "syn"
version = "1.0.104"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4ae548ec36cf198c0ef7710d3c230987c2d6d7bd98ad6edc0274462724c585ce"
dependencies = [
"proc-macro2",
"quote",
"unicode-ident",
]
[[package]]
name = "tempfile"
version = "3.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5cdb1ef4eaeeaddc8fbd371e5017057064af0911902ef36b39801f67cc6d79e4"
dependencies = [
"cfg-if",
"fastrand",
"libc",
"redox_syscall",
"remove_dir_all",
"winapi",
]
[[package]]
name = "termtree"
version = "0.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "95059e91184749cb66be6dc994f67f182b6d897cb3df74a5bf66b5e709295fd8"
[[package]]
name = "thiserror"
version = "1.0.37"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "10deb33631e3c9018b9baf9dcbbc4f737320d2b576bac10f6aefa048fa407e3e"
dependencies = [
"thiserror-impl",
]
[[package]]
name = "thiserror-impl"
version = "1.0.37"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "982d17546b47146b28f7c22e3d08465f6b8903d0ea13c1660d9d84a6e7adcdbb"
dependencies = [
"proc-macro2",
"quote",
"syn",
]
[[package]]
name = "thread_local"
version = "1.1.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5516c27b78311c50bf42c071425c560ac799b11c30b31f87e3081965fe5e0180"
dependencies = [
"once_cell",
]
[[package]]
name = "tinyvec"
version = "1.6.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "87cc5ceb3875bb20c2890005a4e226a4651264a5c75edb2421b52861a0a0cb50"
dependencies = [
"tinyvec_macros",
]
[[package]]
name = "tinyvec_macros"
version = "0.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "cda74da7e1a664f795bb1f8a87ec406fb89a02522cf6e50620d016add6dbbf5c"
[[package]]
name = "toml"
version = "0.5.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8d82e1a7758622a465f8cee077614c73484dac5b836c02ff6a40d5d1010324d7"
dependencies = [
"serde",
]
[[package]]
name = "unicase"
version = "2.6.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "50f37be617794602aabbeee0be4f259dc1778fabe05e2d67ee8f79326d5cb4f6"
dependencies = [
"version_check",
]
[[package]]
name = "unicode-bidi"
version = "0.3.8"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "099b7128301d285f79ddd55b9a83d5e6b9e97c92e0ea0daebee7263e932de992"
[[package]]
name = "unicode-ident"
version = "1.0.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6ceab39d59e4c9499d4e5a8ee0e2735b891bb7308ac83dfb4e80cad195c9f6f3"
[[package]]
name = "unicode-normalization"
version = "0.1.22"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5c5713f0fc4b5db668a2ac63cdb7bb4469d8c9fed047b1d0292cc7b0ce2ba921"
dependencies = [
"tinyvec",
]
[[package]]
name = "url"
version = "2.3.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0d68c799ae75762b8c3fe375feb6600ef5602c883c5d21eb51c09f22b83c4643"
dependencies = [
"form_urlencoded",
"idna",
"percent-encoding",
]
[[package]]
name = "vcpkg"
version = "0.2.15"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "accd4ea62f7bb7a82fe23066fb0957d48ef677f6eeb8215f372f52e48bb32426"
[[package]]
name = "version-sync"
version = "0.9.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "99d0801cec07737d88cb900e6419f6f68733867f90b3faaa837e84692e101bf0"
dependencies = [
"proc-macro2",
"pulldown-cmark",
"regex",
"semver",
"syn",
"toml",
"url",
]
[[package]]
name = "version_check"
version = "0.9.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "49874b5167b65d7193b8aba1567f5c7d93d001cafc34600cee003eda787e483f"
[[package]]
name = "walkdir"
version = "2.3.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "808cf2735cd4b6866113f648b791c6adc5714537bc222d9347bb203386ffda56"
dependencies = [
"same-file",
"winapi",
"winapi-util",
]
[[package]]
name = "which"
version = "4.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1c831fbbee9e129a8cf93e7747a82da9d95ba8e16621cae60ec2cdc849bacb7b"
dependencies = [
"either",
"libc",
"once_cell",
]
[[package]]
name = "winapi"
version = "0.3.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5c839a674fcd7a98952e593242ea400abe93992746761e38641405d28b00f419"
dependencies = [
"winapi-i686-pc-windows-gnu",
"winapi-x86_64-pc-windows-gnu",
]
[[package]]
name = "winapi-i686-pc-windows-gnu"
version = "0.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ac3b87c63620426dd9b991e5ce0329eff545bccbbb34f3be09ff6fb6ab51b7b6"
[[package]]
name = "winapi-util"
version = "0.1.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "70ec6ce85bb158151cae5e5c87f95a8e97d2c0c4b001223f33a334e3ce5de178"
dependencies = [
"winapi",
]
[[package]]
name = "winapi-x86_64-pc-windows-gnu"
version = "0.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "712e227841d057c1ee1cd2fb22fa7e5a5461ae8e48fa2ca79ec42cfc1931183f"
[[package]]
name = "zstd-sys"
version = "2.0.3+zstd.1.5.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "44ccf97612ac95f3ccb89b2d7346b345e52f1c3019be4984f0455fb4ba991f8a"
dependencies = [
"cc",
"libc",
]