[package]
edition = "2021"
name = "sketchlib"
version = "0.3.0"
authors = [
"John Lees <jlees@ebi.ac.uk>",
"Nicholas Croucher <n.croucher@imperial.ac.uk>",
"Johanna von Wachsmann <wachsmannj@ebi.ac.uk>",
"Victor Rodriguez Bouza <vrbouza@ebi.ac.uk>",
"Joel Hellewell <joel@ebi.ac.uk",
]
build = false
include = [
"/Cargo.toml",
"/LICENSE",
"/NOTICE",
"/src",
"/python_mini3di",
"/tests",
]
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Genome and amino-acid sketching"
homepage = "https://bacpop.org/software/"
readme = "README.md"
keywords = [
"bioinformatics",
"genomics",
"sequencing",
"k-mer",
"sketch",
]
categories = [
"command-line-utilities",
"science",
]
license = "Apache-2.0"
repository = "https://github.com/bacpop/sketchlib.rust"
[features]
3di = [
"dep:pyo3",
"dep:pyo3-build-config",
]
[lib]
name = "sketchlib"
crate-type = [
"cdylib",
"lib",
]
path = "src/lib.rs"
[[bin]]
name = "sketchlib"
path = "src/main.rs"
[[test]]
name = "completeness"
path = "tests/completeness.rs"
[[test]]
name = "concat"
path = "tests/concat.rs"
[[test]]
name = "delete"
path = "tests/delete.rs"
[[test]]
name = "distance"
path = "tests/distance.rs"
[[test]]
name = "inverted"
path = "tests/inverted.rs"
[[test]]
name = "merge"
path = "tests/merge.rs"
[[test]]
name = "sketch"
path = "tests/sketch.rs"
[build-dependencies.pyo3-build-config]
version = "0.22"
optional = true
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.ahash]
version = ">=0.8.7"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.anyhow]
version = "1.0"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.arrayref]
version = "0.3"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.ciborium]
version = "0.2"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.clap]
version = "4.5"
features = ["derive"]
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.flate2]
version = "1.1"
features = ["zlib-rs"]
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.hashbrown]
version = "0.14"
features = [
"rayon",
"serde",
]
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.indicatif]
version = "0.17"
features = [
"rayon",
"improved_unicode",
]
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.log]
version = "0.4"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.memmap2]
version = "0.9"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.needletail]
version = "0.5"
features = ["compression"]
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.num-traits]
version = "0.2"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.num_cpus]
version = "1.0"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.pyo3]
version = "0.21"
features = ["auto-initialize"]
optional = true
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.rayon]
version = "1.8"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.regex]
version = "1.10"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.rmp-serde]
version = "1.3"
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.roaring]
version = "0.10"
features = ["serde"]
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.serde]
version = "1.0"
features = ["derive"]
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.simple_logger]
version = "4"
features = ["stderr"]
[target.'cfg(not(target_arch = "wasm32"))'.dependencies.snap]
version = "1.1"
[target.'cfg(not(target_arch = "wasm32"))'.dev-dependencies.approx]
version = "0.5"
[target.'cfg(not(target_arch = "wasm32"))'.dev-dependencies.assert_fs]
version = "1.0.10"
[target.'cfg(not(target_arch = "wasm32"))'.dev-dependencies.predicates]
version = "2.1.5"
[target.'cfg(not(target_arch = "wasm32"))'.dev-dependencies.pretty_assertions]
version = "1.3.0"
[target.'cfg(not(target_arch = "wasm32"))'.dev-dependencies.snapbox]
version = "0.6.21"
[target.'cfg(not(target_arch = "wasm32"))'.dev-dependencies.tempfile]
version = "3.19"
[target.'cfg(target_arch = "wasm32")'.dependencies.anyhow]
version = "1.0"
[target.'cfg(target_arch = "wasm32")'.dependencies.arrayref]
version = "0.3"
[target.'cfg(target_arch = "wasm32")'.dependencies.ciborium]
version = "0.2"
[target.'cfg(target_arch = "wasm32")'.dependencies.clap]
version = "4.5"
features = ["derive"]
[target.'cfg(target_arch = "wasm32")'.dependencies.console_error_panic_hook]
version = "0.1.7"
[target.'cfg(target_arch = "wasm32")'.dependencies.flate2]
version = "1.0.25"
[target.'cfg(target_arch = "wasm32")'.dependencies.getrandom]
version = "0.2"
features = ["js"]
[target.'cfg(target_arch = "wasm32")'.dependencies.hashbrown]
version = "0.14"
features = [
"rayon",
"serde",
]
[target.'cfg(target_arch = "wasm32")'.dependencies.indicatif]
version = "0.17"
features = [
"rayon",
"improved_unicode",
]
[target.'cfg(target_arch = "wasm32")'.dependencies.js-sys]
version = "0.3.51"
[target.'cfg(target_arch = "wasm32")'.dependencies.json]
version = "0.12.4"
[target.'cfg(target_arch = "wasm32")'.dependencies.log]
version = "0.4"
[target.'cfg(target_arch = "wasm32")'.dependencies.memmap2]
version = "0.9"
[target.'cfg(target_arch = "wasm32")'.dependencies.num-traits]
version = "0.2"
[target.'cfg(target_arch = "wasm32")'.dependencies.num_cpus]
version = "1.0"
[target.'cfg(target_arch = "wasm32")'.dependencies.rayon]
version = "1.8"
[target.'cfg(target_arch = "wasm32")'.dependencies.regex]
version = "1.10"
[target.'cfg(target_arch = "wasm32")'.dependencies.rmp-serde]
version = "1.3"
[target.'cfg(target_arch = "wasm32")'.dependencies.roaring]
version = "0.10"
features = ["serde"]
[target.'cfg(target_arch = "wasm32")'.dependencies.seq_io]
version = "0.3.2"
[target.'cfg(target_arch = "wasm32")'.dependencies.serde]
version = "1.0"
features = ["derive"]
[target.'cfg(target_arch = "wasm32")'.dependencies.simple_logger]
version = "4"
features = ["stderr"]
[target.'cfg(target_arch = "wasm32")'.dependencies.snap]
version = "1.1"
[target.'cfg(target_arch = "wasm32")'.dependencies.speedytree]
version = "0.1.0"
[target.'cfg(target_arch = "wasm32")'.dependencies.wasm-bindgen]
version = "0.2"
[target.'cfg(target_arch = "wasm32")'.dependencies.wasm-bindgen-file-reader]
version = "1"
[target.'cfg(target_arch = "wasm32")'.dependencies.web-sys]
version = "0.3.77"
features = [
"Blob",
"console",
"Document",
"Element",
"HtmlCanvasElement",
"HtmlImageElement",
"Response",
"Window",
]
[target.'cfg(target_arch = "wasm32")'.dev-dependencies.predicates]
version = "2.1.5"
[target.'cfg(target_arch = "wasm32")'.dev-dependencies.pretty_assertions]
version = "1.3.0"
[target.'cfg(target_arch = "wasm32")'.dev-dependencies.snapbox]
version = "0.6.21"
[target.'cfg(target_arch = "wasm32")'.dev-dependencies.tempfile]
version = "3.19"
[profile.release]
lto = true
codegen-units = 1
strip = false