[[bin]]
name = "skani"
path = "src/main.rs"
required-features = ["cli"]
[dependencies.bincode]
version = "1"
[dependencies.bio]
version = "1"
[dependencies.clap]
optional = true
version = "3"
[dependencies.fastrand]
version = "1"
[dependencies.fxhash]
version = "0"
[dependencies.gbdt]
version = "0"
[dependencies.gcollections]
version = "1"
[dependencies.intervallum]
version = "1"
[dependencies.log]
version = "0.4"
[dependencies.needletail]
version = "0.4"
[dependencies.num-traits]
version = "0"
[dependencies.partitions]
version = "0"
[dependencies.rand]
version = "0.8.3"
[dependencies.rayon]
version = "1.5"
[dependencies.rust-lapper]
version = "1"
[dependencies.serde]
version = "1"
[dependencies.serde_json]
version = "1"
[dependencies.simple-logging]
version = "2"
[dependencies.smallvec]
features = ["union", "serde", "write"]
version = "1"
[dependencies.statrs]
version = "0"
[dependencies.thiserror]
version = "1.0"
[dev-dependencies.assert_cmd]
version = "1.0.1"
[dev-dependencies.predicates]
version = "1"
[dev-dependencies.serial_test]
version = "0"
[features]
cli = ["clap"]
default = ["cli"]
[package]
description = "skani is a fast tool for calculating ANI between metagenomic sequences, such as metagenome-assembled genomes (MAGs). It is extremely fast and is robust against incompleteness and fragmentation, giving accurate ANI estimates."
documentation = "https://github.com/bluenote-1577/skani"
edition = "2021"
exclude = ["test_files/*", "videos/*"]
homepage = "https://github.com/bluenote-1577/skani"
license = "MIT OR Apache-2.0"
name = "skani"
readme = "README.md"
repository = "https://github.com/bluenote-1577/skani"
version = "0.1.1"
[profile.dev]
opt-level = 3
[profile.release]
panic = "abort"
[target.'cfg(target_env = "musl")'.dependencies.tikv-jemallocator]
version = "0"