[[bench]]
harness = false
name = "ml32bit"
[[bin]]
name = "sfa"
path = "sfa/src/main.rs"
[dependencies.ahash]
version = "0.8.0"
[dependencies.bincode]
version = "2.0.0-rc.1"
[dependencies.bitpacking]
features = ["bitpacker8x"]
version = "0.8.4"
[dependencies.bitvec]
version = "1.0.1"
[dependencies.brotli]
version = "3.3.4"
[dependencies.bumpalo]
features = ["collections"]
version = "3.11.0"
[dependencies.bytelines]
version = "2.4.0"
[dependencies.clap]
features = ["suggestions", "derive", "cargo", "color", "wrap_help"]
version = "3.2.8"
[dependencies.core_affinity]
version = "0.5.10"
[dependencies.crossbeam]
version = "0.8.1"
[dependencies.env_logger]
version = "0.9.0"
[dependencies.flate2]
default-features = false
features = ["zlib-ng-compat"]
version = "1.0.24"
[dependencies.git-version]
version = "0.3.5"
[dependencies.hashbrown]
version = "0.12.3"
[dependencies.indicatif]
version = "0.17.0"
[dependencies.itertools]
version = "0.10.3"
[dependencies.log]
version = "0.4.17"
[dependencies.lz4_flex]
version = "0.9.4"
[dependencies.mimalloc]
default-features = false
version = "0.1.29"
[dependencies.rand]
version = "0.8.5"
[dependencies.rand_chacha]
version = "0.3.1"
[dependencies.rand_core]
version = "0.6.3"
[dependencies.rayon]
version = "1.5.3"
[dependencies.simdutf8]
version = "0.1.4"
[dependencies.snap]
version = "1.0.5"
[dependencies.static_assertions]
version = "1.1.0"
[dependencies.toml]
version = "0.5.9"
[dependencies.twox-hash]
version = "1.6.3"
[dependencies.xz]
version = "0.1.0"
[dependencies.zstd]
default-features = false
features = ["arrays", "legacy", "zstdmt", "experimental"]
version = "0.11.2"
[dev-dependencies.criterion]
version = "0.3.5"
[dev-dependencies.generic-array]
version = "0.14.5"
[dev-dependencies.humansize]
version = "1.1.1"
[dev-dependencies.iai]
version = "0.1"
[dev-dependencies.num-traits]
version = "0.2.15"
[dev-dependencies.numeric-array]
version = "0.5.2"
[lib]
crate-type = ["rlib", "dylib"]
name = "libsfasta"
path = "libsfasta/src/lib.rs"
[package]
authors = ["Joseph Guhlin <joseph.guhlin@gmail.com>"]
categories = ["science", "command-line-utilities", "filesystem", "compression"]
description = "Better FASTA sequence compression and querying"
edition = "2021"
exclude = ["**/*.fasta", "libsfasta/test_data/", "*.profdata"]
keywords = ["bioinformatics", "fasta", "compression"]
license = "MIT OR Apache-2.0"
name = "sfasta"
readme = "README.md"
repository = "https://github.com/jguhlin/sfasta"
version = "0.3.0"
[profile.dev]
debug = true
[profile.dev.package."*"]
opt-level = 3
[profile.release]
codegen-units = 1
lto = "fat"
opt-level = 3