seqx 0.1.0

A command-line tool for processing and analyzing biological sequences.
Documentation 
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "seqx"
version = "0.1.0"
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "A command-line tool for processing and analyzing biological sequences."
readme = "README.md"
license = "MIT"
repository = "https://github.com/openbioseq/seqx"

[lib]
name = "seqx"
path = "src/lib.rs"

[[bin]]
name = "seqx"
path = "src/main.rs"

[dependencies.anyhow]
version = "1.0.102"

[dependencies.clap]
version = "4.5.60"
features = ["derive"]

[dependencies.flate2]
version = "1.0"

[dependencies.memmap2]
version = "0.9.10"

[dependencies.noodles]
version = "0.107.0"
features = [
    "bed",
    "fasta",
    "fastq",
]

[dependencies.packed-seq]
version = "4.4.2"
features = ["scalar"]

[dependencies.rand]
version = "0.10.0"

[dependencies.rayon]
version = "1.10"

[dependencies.regex]
version = "1.12.3"

[dependencies.tempfile]
version = "3.13"