seqrepo 0.10.3

Port of (read-only) functionality of biocommons/seqrepo to Rust
Documentation
name: CI

on:
  push:
    branches:
      - main
  pull_request:
    branches:
      - main

jobs:
  Formatting:
    runs-on: ubuntu-latest
    steps:
      - name: Checkout repository
        uses: actions/checkout@v4

      - name: Install stable toolchain
        uses: actions-rs/toolchain@v1
        with:
          toolchain: stable
          override: true
          components: rustfmt

      - name: Check format
        run: |
          cargo fmt -- --check

  Linting:
    runs-on: ubuntu-latest
    steps:
      - name: Checkout repository
        uses: actions/checkout@v4

      - name: Install stable toolchain
        uses: actions-rs/toolchain@v1
        with:
          toolchain: stable
          override: true
          components: clippy

      - name: Lint with clippy
        uses: actions-rs/clippy-check@v1
        with:
          token: ${{ secrets.GITHUB_TOKEN }}

  Testing:
    needs: Formatting
    runs-on: ubuntu-latest
    steps:
      - name: Checkout repository
        uses: actions/checkout@v4
        with:
          lfs: true

      - name: Install stable toolchain
        uses: actions-rs/toolchain@v1
        with:
          toolchain: stable
          override: true

      - name: Install cargo-tarpaulin
        run: cargo install cargo-tarpaulin --version '0.27.3'

      - uses: Swatinem/rust-cache@v2.7.3
        with:
          key: cargo-tarpaulin-0.27.3

      - name: Run cargo-tarpaulin
        run: cargo tarpaulin --all-features -- --test-threads 1

      - name: Build all examples
        uses: actions-rs/cargo@v1
        with:
          command: build
          args: --examples

      - name: Codecov
        uses: codecov/codecov-action@v4
        with:
          verbose: true
          fail_ci_if_error: true
          token: ${{ secrets.CODECOV_TOKEN }}