semsimian_server 0.2.5

A server for SemSimian, a semantic similarity service for biomedical ontologies
Documentation 
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name: Test SemSimian Server
on:
  push:
    branches: [main]
  pull_request:
    branches: [main]

jobs:
  test:
    name: Run cargo tests
    runs-on: ubuntu-latest
    steps:
      - name: Checkout
        uses: actions/checkout@v6

      # Install/Update Rust toolchain
      - name: Check versions
        run: |
          rustup --version
          rustup update
          rustup --version
          cargo --version
          rustc --version
          rustup show

      - name: Free up disk space on runner
        run: |
          sudo apt-get clean -y || true
          sudo rm -rf /usr/share/dotnet /usr/local/lib/android /opt/ghc /usr/local/share/dotnet || true
          docker system prune --all --volumes --force || true
          sudo rm -rf /var/lib/apt/lists/* || true
          df -h

      - name: Download Phenio
        run: |
          mkdir -p ~/.data/oaklib
          # If the remote file is phenio.db.gz, stream it and write the decompressed DB directly
          curl -sL https://data.monarchinitiative.org/monarch-kg/latest/phenio.db.gz | gunzip -c > ~/.data/oaklib/phenio.db
          # verify
          ls -lh /home/runner/.data/oaklib
          df -h

      - name: Run Tests
        run: |
          cargo test test_compare -- --nocapture
          cargo test test_search -- --nocapture

  build-docker:
    name: Test Building Docker Image
    runs-on: ubuntu-latest
    # skip on pushes to main
    if: github.ref != 'refs/heads/main'
    steps:
      - name: Build Docker image
        uses: docker/build-push-action@v6
        with:
          push: false