semsimian_server 0.2.3

A server for SemSimian, a semantic similarity service for biomedical ontologies
Documentation 
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name: Test SemSimian Server
on:
  push:
    branches: [main]
  pull_request:
    branches: [main]

jobs:
  test:
    name: Run cargo tests
    runs-on: ubuntu-latest
    steps:
      - name: Checkout
        uses: actions/checkout@v5

      - name: Set up Python
        uses: actions/setup-python@v5

      - name: Install Python dev dependencies
        run: sudo apt-get update && sudo apt-get install python3-dev

      # Install/Update Rust toolchain
      - name: Check versions
        run: |
          rustup --version
          rustup update
          rustup --version
          cargo --version
          rustc --version
          rustup show

      - name: Download Phenio
        run: |
          mkdir -p ~/.data/oaklib
          wget https://data.monarchinitiative.org/monarch-kg/latest/phenio.db.gz -O ~/.data/oaklib/phenio.db.gz
          gunzip ~/.data/oaklib/phenio.db.gz

      - name: Run Tests
        run: |
          cargo test test_compare -- --nocapture
          cargo test test_search -- --nocapture

  build-docker:
    name: Test Building Docker Image
    runs-on: ubuntu-latest
    # skip on pushes to main
    if: github.ref != 'refs/heads/main'
    steps:
      - name: Build Docker image
        uses: docker/build-push-action@v5
        with:
          push: false