scirs2-core 0.4.3

Core utilities and common functionality for SciRS2 (scirs2-core)
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
//! Cross-language serialization protocol for SciRS2.
//!
//! Provides a versioned binary format (`.scirs2` files) that can be
//! read by Python bindings, WASM modules, and native Rust code.
//!
//! # Format
//!
//! Header: 64 bytes, little-endian
//! - Magic: `b"SCIRS2\0\0"` (8 bytes)
//! - Version: u16 major, u16 minor (4 bytes)
//! - Payload type: u8 (1 byte): 0=array, 1=model, 2=stats, 3=custom
//! - Compression: u8 (1 byte): 0=none, 1=lz4, 2=zstd
//! - Checksum: u32 CRC32 of **uncompressed** payload (4 bytes)
//! - Payload length: u64 (8 bytes) — bytes actually stored on disk
//! - Reserved: 38 bytes of zeros
//!
//! Payload (variable length, may be compressed):
//! - For arrays: `dtype(u8)` + `ndim(u8)` + `shape(u64 each, little-endian)` + raw element bytes (little-endian)
//! - For models: JSON config + raw parameter bytes
//! - For stats: key-value pairs with typed values
//! - For custom: raw bytes (caller-defined format)
//!
//! # Example
//!
//! ```no_run
//! use scirs2_core::serialization::{save_array, load_array, CompressionType};
//! use ndarray::Array2;
//! use std::path::Path;
//!
//! let data = Array2::<f32>::ones((3, 4)).into_dyn();
//! let path = Path::new("/tmp/test.scirs2");
//! save_array(path, &data, CompressionType::None).expect("should succeed");
//! let loaded = load_array::<f32>(path).expect("should succeed");
//! assert_eq!(data, loaded);
//! ```

use std::io::{self, BufReader, BufWriter, Read, Seek, SeekFrom, Write};
use std::path::Path;

use ndarray::{Array, IxDyn};

const MAGIC: &[u8; 8] = b"SCIRS2\0\0";
const VERSION_MAJOR: u16 = 0;
const VERSION_MINOR: u16 = 3;
const HEADER_SIZE: usize = 64;

// Byte offsets within the 64-byte header
const OFFSET_MAGIC: usize = 0;
const OFFSET_VERSION_MAJOR: usize = 8;
const OFFSET_VERSION_MINOR: usize = 10;
const OFFSET_PAYLOAD_TYPE: usize = 12;
const OFFSET_COMPRESSION: usize = 13;
const OFFSET_CHECKSUM: usize = 14;
const OFFSET_PAYLOAD_LENGTH: usize = 18;
// bytes 26..64 are reserved (38 bytes, must be zero)

// ─── PayloadType ──────────────────────────────────────────────────────────────

/// Identifies the kind of data stored in the `.scirs2` payload.
#[derive(Debug, Clone, Copy, PartialEq, Eq)]
#[repr(u8)]
pub enum PayloadType {
    /// N-dimensional array with dtype prefix and shape encoding.
    Array = 0,
    /// Model: JSON config followed by raw parameter bytes.
    Model = 1,
    /// Statistics: key-value pairs with typed values.
    Stats = 2,
    /// Custom: raw bytes with caller-defined semantics.
    Custom = 3,
}

impl PayloadType {
    fn from_u8(v: u8) -> Result<Self, SerializationError> {
        match v {
            0 => Ok(Self::Array),
            1 => Ok(Self::Model),
            2 => Ok(Self::Stats),
            3 => Ok(Self::Custom),
            other => Err(SerializationError::UnknownPayloadType(other)),
        }
    }
}

// ─── CompressionType ──────────────────────────────────────────────────────────

/// Compression algorithm applied to the payload bytes.
#[derive(Debug, Clone, Copy, PartialEq, Eq)]
#[repr(u8)]
pub enum CompressionType {
    /// No compression; payload stored verbatim.
    None = 0,
    /// LZ4 frame compression — very fast, moderate ratio.
    Lz4 = 1,
    /// Zstandard compression — moderate speed, excellent ratio.
    Zstd = 2,
}

impl CompressionType {
    fn from_u8(v: u8) -> Result<Self, SerializationError> {
        match v {
            0 => Ok(Self::None),
            1 => Ok(Self::Lz4),
            2 => Ok(Self::Zstd),
            other => Err(SerializationError::Compression(format!(
                "unknown compression type byte: {}",
                other
            ))),
        }
    }
}

// ─── Header ───────────────────────────────────────────────────────────────────

/// Parsed `.scirs2` file header (64 bytes).
#[derive(Debug, Clone)]
pub struct Scirs2Header {
    /// `(major, minor)` format version.
    pub version: (u16, u16),
    /// Kind of data in the payload.
    pub payload_type: PayloadType,
    /// How the payload is compressed on disk.
    pub compression: CompressionType,
    /// CRC32 of the **uncompressed** payload.
    pub checksum: u32,
    /// Byte count stored on disk (after optional compression).
    pub payload_length: u64,
}

impl Scirs2Header {
    /// Serialize this header into a fixed 64-byte array.
    fn to_bytes(&self) -> [u8; HEADER_SIZE] {
        let mut buf = [0u8; HEADER_SIZE];
        buf[OFFSET_MAGIC..OFFSET_MAGIC + 8].copy_from_slice(MAGIC);
        buf[OFFSET_VERSION_MAJOR..OFFSET_VERSION_MAJOR + 2]
            .copy_from_slice(&self.version.0.to_le_bytes());
        buf[OFFSET_VERSION_MINOR..OFFSET_VERSION_MINOR + 2]
            .copy_from_slice(&self.version.1.to_le_bytes());
        buf[OFFSET_PAYLOAD_TYPE] = self.payload_type as u8;
        buf[OFFSET_COMPRESSION] = self.compression as u8;
        buf[OFFSET_CHECKSUM..OFFSET_CHECKSUM + 4].copy_from_slice(&self.checksum.to_le_bytes());
        buf[OFFSET_PAYLOAD_LENGTH..OFFSET_PAYLOAD_LENGTH + 8]
            .copy_from_slice(&self.payload_length.to_le_bytes());
        // bytes 26..64 remain zero (reserved)
        buf
    }

    /// Parse a 64-byte buffer into a `Scirs2Header`.
    fn from_bytes(buf: &[u8; HEADER_SIZE]) -> Result<Self, SerializationError> {
        // Validate magic
        if &buf[OFFSET_MAGIC..OFFSET_MAGIC + 8] != MAGIC.as_slice() {
            return Err(SerializationError::InvalidMagic);
        }

        let major = u16::from_le_bytes([buf[OFFSET_VERSION_MAJOR], buf[OFFSET_VERSION_MAJOR + 1]]);
        let minor = u16::from_le_bytes([buf[OFFSET_VERSION_MINOR], buf[OFFSET_VERSION_MINOR + 1]]);

        // Forward-compatibility: reject files written by a future major version
        if major > VERSION_MAJOR {
            return Err(SerializationError::UnsupportedVersion(major, minor));
        }

        let payload_type = PayloadType::from_u8(buf[OFFSET_PAYLOAD_TYPE])?;
        let compression = CompressionType::from_u8(buf[OFFSET_COMPRESSION])?;

        let checksum = u32::from_le_bytes([
            buf[OFFSET_CHECKSUM],
            buf[OFFSET_CHECKSUM + 1],
            buf[OFFSET_CHECKSUM + 2],
            buf[OFFSET_CHECKSUM + 3],
        ]);

        // SAFETY: OFFSET_PAYLOAD_LENGTH..OFFSET_PAYLOAD_LENGTH+8 is always within [0,64)
        let pl_bytes: [u8; 8] = buf[OFFSET_PAYLOAD_LENGTH..OFFSET_PAYLOAD_LENGTH + 8]
            .try_into()
            .map_err(|_| {
                SerializationError::Io(io::Error::new(
                    io::ErrorKind::InvalidData,
                    "internal: slice length invariant violated reading payload_length",
                ))
            })?;
        let payload_length = u64::from_le_bytes(pl_bytes);

        Ok(Self {
            version: (major, minor),
            payload_type,
            compression,
            checksum,
            payload_length,
        })
    }
}

// ─── Scirs2Writer ─────────────────────────────────────────────────────────────

/// Low-level writer for `.scirs2` files.
///
/// Writes exactly one payload per instance. For multiple payloads
/// use separate writers.
///
/// # Example
///
/// ```no_run
/// use scirs2_core::serialization::{Scirs2Writer, PayloadType, CompressionType};
/// use std::fs::File;
///
/// let file = File::create("/tmp/out.scirs2").expect("should succeed");
/// let mut writer = Scirs2Writer::new(file);
/// writer
///     .write_payload(PayloadType::Custom, b"hello scirs2", CompressionType::None)
///     .expect("should succeed");
/// ```
pub struct Scirs2Writer<W: Write> {
    inner: W,
}

impl<W: Write> Scirs2Writer<W> {
    /// Wrap an existing [`Write`] implementor.
    pub fn new(writer: W) -> Self {
        Self { inner: writer }
    }

    /// Compress (if requested) and write a single payload to the underlying writer.
    ///
    /// The CRC32 checksum is computed over the **uncompressed** `payload` bytes.
    /// The stored bytes (in the file, after the header) may be compressed.
    pub fn write_payload(
        &mut self,
        payload_type: PayloadType,
        payload: &[u8],
        compression: CompressionType,
    ) -> Result<(), SerializationError> {
        let checksum = crc32fast::hash(payload);
        let stored = compress_payload(payload, compression)?;

        let header = Scirs2Header {
            version: (VERSION_MAJOR, VERSION_MINOR),
            payload_type,
            compression,
            checksum,
            payload_length: stored.len() as u64,
        };

        self.inner.write_all(&header.to_bytes())?;
        self.inner.write_all(&stored)?;
        Ok(())
    }
}

// ─── Scirs2Reader ─────────────────────────────────────────────────────────────

/// Low-level reader for `.scirs2` files.
///
/// The header is parsed eagerly on construction; the payload bytes are read
/// lazily on demand.
///
/// # Example
///
/// ```no_run
/// use scirs2_core::serialization::Scirs2Reader;
/// use std::fs::File;
/// use std::io::BufReader;
///
/// let file = BufReader::new(File::open("/tmp/out.scirs2").expect("should succeed"));
/// let mut reader = Scirs2Reader::new(file).expect("should succeed");
/// println!("payload type = {:?}", reader.header.payload_type);
/// let bytes = reader.read_payload().expect("should succeed");
/// ```
pub struct Scirs2Reader<R: Read + Seek> {
    inner: R,
    /// Header parsed from the beginning of the file.
    pub header: Scirs2Header,
}

impl<R: Read + Seek> Scirs2Reader<R> {
    /// Open a `.scirs2` reader, validating and parsing the header immediately.
    ///
    /// Returns [`SerializationError::InvalidMagic`] when the file is not a
    /// valid `.scirs2` file, or [`SerializationError::UnsupportedVersion`] when
    /// the format major version is newer than this library.
    pub fn new(mut reader: R) -> Result<Self, SerializationError> {
        let mut buf = [0u8; HEADER_SIZE];
        reader.read_exact(&mut buf)?;
        let header = Scirs2Header::from_bytes(&buf)?;
        Ok(Self {
            inner: reader,
            header,
        })
    }

    /// Read and decompress the payload, returning the raw (uncompressed) bytes.
    ///
    /// This method seeks back to the start of the payload each time it is
    /// called, so repeated calls are safe.
    pub fn read_payload(&mut self) -> Result<Vec<u8>, SerializationError> {
        self.inner.seek(SeekFrom::Start(HEADER_SIZE as u64))?;

        let len = self.header.payload_length as usize;
        let mut stored = vec![0u8; len];
        self.inner.read_exact(&mut stored)?;

        decompress_payload(&stored, self.header.compression, len)
    }

    /// Read the payload and verify its CRC32 against the header checksum.
    ///
    /// Returns `Ok(true)` if the checksum matches, `Ok(false)` otherwise.
    /// Returns `Err` on I/O or decompression failure.
    pub fn verify_checksum(&mut self) -> Result<bool, SerializationError> {
        let payload = self.read_payload()?;
        let computed = crc32fast::hash(&payload);
        Ok(computed == self.header.checksum)
    }
}

// ─── Compression helpers ──────────────────────────────────────────────────────

/// Compress `data` using the requested algorithm.
fn compress_payload(
    data: &[u8],
    compression: CompressionType,
) -> Result<Vec<u8>, SerializationError> {
    match compression {
        CompressionType::None => Ok(data.to_vec()),

        CompressionType::Lz4 => {
            #[cfg(feature = "serialization")]
            {
                oxiarc_lz4::compress(data)
                    .map_err(|e| SerializationError::Compression(format!("LZ4 compress: {}", e)))
            }
            #[cfg(not(feature = "serialization"))]
            {
                let _ = data;
                Err(SerializationError::Compression(
                    "LZ4 compression requires the `serialization` feature".to_string(),
                ))
            }
        }

        CompressionType::Zstd => {
            #[cfg(feature = "serialization")]
            {
                oxiarc_zstd::compress(data)
                    .map_err(|e| SerializationError::Compression(format!("Zstd compress: {}", e)))
            }
            #[cfg(not(feature = "serialization"))]
            {
                let _ = data;
                Err(SerializationError::Compression(
                    "Zstd compression requires the `serialization` feature".to_string(),
                ))
            }
        }
    }
}

/// Decompress `data` using the stored compression type.
///
/// `stored_len` is used as a hint for decompressors that require an output
/// size hint (LZ4 frame decompressor uses `stored_len * 4` as the upper bound).
fn decompress_payload(
    data: &[u8],
    compression: CompressionType,
    stored_len: usize,
) -> Result<Vec<u8>, SerializationError> {
    match compression {
        CompressionType::None => Ok(data.to_vec()),

        CompressionType::Lz4 => {
            #[cfg(feature = "serialization")]
            {
                // LZ4 frame decompression: use 4× the stored size as an upper bound.
                // For highly compressible data this might need to be larger; in practice
                // scientific arrays have at most ~8× decompression ratios.
                let max_output = stored_len.saturating_mul(8).max(4096);
                oxiarc_lz4::decompress(data, max_output)
                    .map_err(|e| SerializationError::Compression(format!("LZ4 decompress: {}", e)))
            }
            #[cfg(not(feature = "serialization"))]
            {
                let _ = (data, stored_len);
                Err(SerializationError::Compression(
                    "LZ4 decompression requires the `serialization` feature".to_string(),
                ))
            }
        }

        CompressionType::Zstd => {
            #[cfg(feature = "serialization")]
            {
                let _ = stored_len;
                oxiarc_zstd::decompress(data)
                    .map_err(|e| SerializationError::Compression(format!("Zstd decompress: {}", e)))
            }
            #[cfg(not(feature = "serialization"))]
            {
                let _ = (data, stored_len);
                Err(SerializationError::Compression(
                    "Zstd decompression requires the `serialization` feature".to_string(),
                ))
            }
        }
    }
}

// ─── ArrayElement trait ───────────────────────────────────────────────────────

/// Element type supported by the `.scirs2` array payload.
///
/// Each concrete type carries a stable 1-byte `dtype_id` embedded in the file,
/// enabling typed deserialization and cross-language interoperability.
///
/// # Dtype IDs
///
/// | ID | Type |
/// |----|------|
/// | 1  | f32  |
/// | 2  | f64  |
/// | 3  | i32  |
/// | 4  | i64  |
/// | 5  | u32  |
/// | 6  | u64  |
pub trait ArrayElement: Copy + 'static {
    /// Stable 1-byte dtype identifier embedded in the binary format.
    fn dtype_id() -> u8;
    /// Size in bytes of one element.
    fn element_size() -> usize;
    /// Deserialize `n` elements from a little-endian byte slice.
    fn from_le_bytes_slice(bytes: &[u8], n: usize) -> Vec<Self>;
    /// Serialize a slice of elements to little-endian bytes.
    fn to_le_bytes_vec(slice: &[Self]) -> Vec<u8>;
}

/// Implement `ArrayElement` for a primitive numeric type.
macro_rules! impl_array_element {
    ($ty:ty, $id:expr, $size:expr, $arr:expr) => {
        impl ArrayElement for $ty {
            fn dtype_id() -> u8 {
                $id
            }
            fn element_size() -> usize {
                $size
            }

            fn from_le_bytes_slice(bytes: &[u8], n: usize) -> Vec<Self> {
                (0..n)
                    .map(|i| {
                        let start = i * $size;
                        // We checked that `bytes` has enough data before calling this
                        let arr: [u8; $size] =
                            bytes[start..start + $size].try_into().unwrap_or($arr);
                        <$ty>::from_le_bytes(arr)
                    })
                    .collect()
            }

            fn to_le_bytes_vec(slice: &[Self]) -> Vec<u8> {
                slice.iter().flat_map(|v| v.to_le_bytes()).collect()
            }
        }
    };
}

impl_array_element!(f32, 1, 4, [0u8; 4]);
impl_array_element!(f64, 2, 8, [0u8; 8]);
impl_array_element!(i32, 3, 4, [0u8; 4]);
impl_array_element!(i64, 4, 8, [0u8; 8]);
impl_array_element!(u32, 5, 4, [0u8; 4]);
impl_array_element!(u64, 6, 8, [0u8; 8]);

// ─── Array encoding / decoding ────────────────────────────────────────────────

/// Encode an ndarray into the `.scirs2` array payload format.
///
/// Layout: `dtype_id(u8)` | `ndim(u8)` | `dim_0(u64le)` | … | `dim_{n-1}(u64le)` | `data(le bytes)`
fn encode_array<F: ArrayElement>(array: &Array<F, IxDyn>) -> Vec<u8> {
    let shape = array.shape();
    let ndim = shape.len();

    let header_bytes = 2 + ndim * 8;
    let data_bytes = array.len() * F::element_size();
    let mut buf = Vec::with_capacity(header_bytes + data_bytes);

    buf.push(F::dtype_id());
    buf.push(ndim as u8);

    for &dim in shape {
        buf.extend_from_slice(&(dim as u64).to_le_bytes());
    }

    // Collect in C-contiguous (row-major) iteration order
    let data: Vec<F> = array.iter().copied().collect();
    buf.extend_from_slice(&F::to_le_bytes_vec(&data));

    buf
}

/// Decode an ndarray from the `.scirs2` array payload format.
fn decode_array<F: ArrayElement>(payload: &[u8]) -> Result<Array<F, IxDyn>, SerializationError> {
    if payload.len() < 2 {
        return Err(SerializationError::Io(io::Error::new(
            io::ErrorKind::UnexpectedEof,
            "payload too short to contain array header (need at least 2 bytes)",
        )));
    }

    let actual_dtype = payload[0];
    let expected_dtype = F::dtype_id();
    if actual_dtype != expected_dtype {
        return Err(SerializationError::TypeMismatch {
            expected: expected_dtype,
            actual: actual_dtype,
        });
    }

    let ndim = payload[1] as usize;
    let shape_end = 2 + ndim * 8;

    if payload.len() < shape_end {
        return Err(SerializationError::Io(io::Error::new(
            io::ErrorKind::UnexpectedEof,
            format!(
                "payload too short to read shape: need {} bytes for {} dims, have {}",
                shape_end,
                ndim,
                payload.len()
            ),
        )));
    }

    let mut shape = Vec::with_capacity(ndim);
    for i in 0..ndim {
        let offset = 2 + i * 8;
        let dim_bytes: [u8; 8] = payload[offset..offset + 8].try_into().map_err(|_| {
            SerializationError::Io(io::Error::new(
                io::ErrorKind::InvalidData,
                format!("internal: failed to read dim {} from payload", i),
            ))
        })?;
        shape.push(u64::from_le_bytes(dim_bytes) as usize);
    }

    let n_elements: usize = shape.iter().product();
    let data_bytes = n_elements * F::element_size();

    if payload.len() < shape_end + data_bytes {
        return Err(SerializationError::Io(io::Error::new(
            io::ErrorKind::UnexpectedEof,
            format!(
                "payload too short for array data: need {} bytes, have {}",
                shape_end + data_bytes,
                payload.len()
            ),
        )));
    }

    let elements = F::from_le_bytes_slice(&payload[shape_end..shape_end + data_bytes], n_elements);

    Array::from_shape_vec(IxDyn(&shape), elements).map_err(|e| {
        SerializationError::Io(io::Error::new(
            io::ErrorKind::InvalidData,
            format!("shape/data mismatch during array reconstruction: {}", e),
        ))
    })
}

// ─── Public convenience API ───────────────────────────────────────────────────

/// Save an n-dimensional array to a `.scirs2` file.
///
/// The file is created (or truncated) at `path`. The element type `F` is
/// embedded in the payload so [`load_array`] can verify type safety on load.
///
/// # Arguments
///
/// * `path` — Destination file path.
/// * `array` — The array to serialize.
/// * `compression` — Compression algorithm applied to the payload.
///
/// # Errors
///
/// Returns [`SerializationError`] on I/O failures or if the chosen compression
/// algorithm is unavailable in this build.
///
/// # Example
///
/// ```no_run
/// use scirs2_core::serialization::{save_array, CompressionType};
/// use ndarray::Array2;
///
/// let data = Array2::<f64>::eye(4).into_dyn();
/// save_array(std::path::Path::new("/tmp/eye4.scirs2"), &data, CompressionType::None).expect("should succeed");
/// ```
pub fn save_array<F: ArrayElement>(
    path: &Path,
    array: &Array<F, IxDyn>,
    compression: CompressionType,
) -> Result<(), SerializationError> {
    let file = std::fs::File::create(path)?;
    let writer = BufWriter::new(file);
    let mut scirs2 = Scirs2Writer::new(writer);
    let payload = encode_array(array);
    scirs2.write_payload(PayloadType::Array, &payload, compression)
}

/// Load an n-dimensional array from a `.scirs2` file.
///
/// The element type `F` is checked against the dtype stored in the file;
/// a [`SerializationError::TypeMismatch`] is returned if they differ.
///
/// # Example
///
/// ```no_run
/// use scirs2_core::serialization::load_array;
///
/// let arr = load_array::<f64>(std::path::Path::new("/tmp/eye4.scirs2")).expect("should succeed");
/// println!("shape: {:?}", arr.shape());
/// ```
pub fn load_array<F: ArrayElement>(path: &Path) -> Result<Array<F, IxDyn>, SerializationError> {
    let file = std::fs::File::open(path)?;
    let reader = BufReader::new(file);
    let mut scirs2 = Scirs2Reader::new(reader)?;

    if scirs2.header.payload_type != PayloadType::Array {
        return Err(SerializationError::Io(io::Error::new(
            io::ErrorKind::InvalidData,
            format!(
                "expected Array payload type (0), found {:?} ({})",
                scirs2.header.payload_type, scirs2.header.payload_type as u8
            ),
        )));
    }

    let payload = scirs2.read_payload()?;
    decode_array::<F>(&payload)
}

// ─── Error type ───────────────────────────────────────────────────────────────

/// Errors that can occur during `.scirs2` serialization or deserialization.
#[derive(Debug, thiserror::Error)]
pub enum SerializationError {
    /// Underlying I/O failure (file not found, permission denied, etc.).
    #[error("IO error: {0}")]
    Io(#[from] std::io::Error),

    /// The file does not start with the expected `b"SCIRS2\0\0"` magic bytes.
    #[error("Invalid magic bytes — not a valid .scirs2 file")]
    InvalidMagic,

    /// The file was written by a newer major version of this library.
    #[error(
        "Unsupported version {0}.{1} (this library supports up to {major}.x)",
        major = VERSION_MAJOR
    )]
    UnsupportedVersion(u16, u16),

    /// CRC32 of the decompressed payload does not match the stored checksum.
    #[error("Checksum mismatch — file may be corrupted")]
    ChecksumMismatch,

    /// A compression or decompression operation failed.
    #[error("Compression error: {0}")]
    Compression(String),

    /// The payload type byte is not one of the defined [`PayloadType`] variants.
    #[error("Unknown payload type: {0}")]
    UnknownPayloadType(u8),

    /// The dtype stored in the file differs from the type `F` requested by the caller.
    #[error("Type mismatch: expected dtype {expected}, found {actual}")]
    TypeMismatch {
        /// Dtype ID the caller requested.
        expected: u8,
        /// Dtype ID found in the file.
        actual: u8,
    },
}

// ─── Tests ────────────────────────────────────────────────────────────────────

#[cfg(test)]
mod tests {
    use super::*;
    use ndarray::{Array1, Array2, Array3};
    use std::io::Cursor;

    // ── header roundtrip ──────────────────────────────────────────────────────

    #[test]
    fn test_header_roundtrip_all_fields() {
        let original = Scirs2Header {
            version: (0, 3),
            payload_type: PayloadType::Array,
            compression: CompressionType::None,
            checksum: 0xDEAD_BEEF,
            payload_length: 1_234_567_890,
        };
        let bytes = original.to_bytes();
        assert_eq!(bytes.len(), HEADER_SIZE);

        let parsed = Scirs2Header::from_bytes(&bytes).expect("header parse failed");
        assert_eq!(parsed.version, original.version);
        assert_eq!(parsed.payload_type, original.payload_type);
        assert_eq!(parsed.compression, original.compression);
        assert_eq!(parsed.checksum, original.checksum);
        assert_eq!(parsed.payload_length, original.payload_length);
    }

    #[test]
    fn test_header_reserved_bytes_are_zero() {
        let header = Scirs2Header {
            version: (0, 3),
            payload_type: PayloadType::Custom,
            compression: CompressionType::None,
            checksum: 42,
            payload_length: 8,
        };
        let bytes = header.to_bytes();
        // Reserved bytes: 26..64
        for i in 26..64 {
            assert_eq!(bytes[i], 0, "reserved byte {} should be zero", i);
        }
    }

    #[test]
    fn test_invalid_magic_rejected() {
        let mut buf = [0u8; HEADER_SIZE];
        buf[0..8].copy_from_slice(b"BADMAGIC");
        assert!(
            matches!(
                Scirs2Header::from_bytes(&buf),
                Err(SerializationError::InvalidMagic)
            ),
            "should reject non-SCIRS2 magic"
        );
    }

    #[test]
    fn test_future_major_version_rejected() {
        let header = Scirs2Header {
            version: (255, 0),
            payload_type: PayloadType::Custom,
            compression: CompressionType::None,
            checksum: 0,
            payload_length: 0,
        };
        let bytes = header.to_bytes();
        assert!(
            matches!(
                Scirs2Header::from_bytes(&bytes),
                Err(SerializationError::UnsupportedVersion(255, 0))
            ),
            "should reject future major version"
        );
    }

    #[test]
    fn test_unknown_payload_type_rejected() {
        let header = Scirs2Header {
            version: (0, 3),
            payload_type: PayloadType::Custom,
            compression: CompressionType::None,
            checksum: 0,
            payload_length: 0,
        };
        let mut bytes = header.to_bytes();
        bytes[OFFSET_PAYLOAD_TYPE] = 99; // unknown type — not in PayloadType enum
        let result = Scirs2Header::from_bytes(&bytes);
        assert!(
            matches!(result, Err(SerializationError::UnknownPayloadType(99))),
            "should return UnknownPayloadType(99) for unknown payload type byte"
        );
    }

    #[test]
    fn test_payload_type_from_u8_all_variants() {
        assert!(matches!(PayloadType::from_u8(0), Ok(PayloadType::Array)));
        assert!(matches!(PayloadType::from_u8(1), Ok(PayloadType::Model)));
        assert!(matches!(PayloadType::from_u8(2), Ok(PayloadType::Stats)));
        assert!(matches!(PayloadType::from_u8(3), Ok(PayloadType::Custom)));
        assert!(matches!(
            PayloadType::from_u8(4),
            Err(SerializationError::UnknownPayloadType(4))
        ));
    }

    // ── writer / reader roundtrip ─────────────────────────────────────────────

    #[test]
    fn test_custom_payload_no_compression_roundtrip() {
        let payload = b"the quick brown fox jumps over the lazy dog";
        let mut buf = Vec::new();
        {
            let mut writer = Scirs2Writer::new(&mut buf);
            writer
                .write_payload(PayloadType::Custom, payload, CompressionType::None)
                .expect("write_payload failed");
        }

        let cursor = Cursor::new(&buf);
        let mut reader = Scirs2Reader::new(cursor).expect("Scirs2Reader::new failed");
        assert_eq!(reader.header.payload_type, PayloadType::Custom);
        assert_eq!(reader.header.compression, CompressionType::None);
        assert_eq!(reader.header.payload_length, payload.len() as u64);

        let out = reader.read_payload().expect("read_payload failed");
        assert_eq!(out.as_slice(), payload.as_slice());
    }

    #[test]
    fn test_empty_payload_roundtrip() {
        let payload: &[u8] = b"";
        let mut buf = Vec::new();
        {
            let mut writer = Scirs2Writer::new(&mut buf);
            writer
                .write_payload(PayloadType::Stats, payload, CompressionType::None)
                .expect("write empty payload failed");
        }
        let cursor = Cursor::new(&buf);
        let mut reader = Scirs2Reader::new(cursor).expect("reader init failed");
        let out = reader.read_payload().expect("read empty payload failed");
        assert!(out.is_empty());
    }

    #[test]
    fn test_verify_checksum_passes_for_intact_data() {
        let payload = b"integrity check payload 0xDEADBEEF";
        let mut buf = Vec::new();
        {
            let mut writer = Scirs2Writer::new(&mut buf);
            writer
                .write_payload(PayloadType::Stats, payload, CompressionType::None)
                .expect("write failed");
        }
        let cursor = Cursor::new(&buf);
        let mut reader = Scirs2Reader::new(cursor).expect("reader init failed");
        assert!(
            reader.verify_checksum().expect("checksum check failed"),
            "checksum should pass for intact data"
        );
    }

    #[test]
    fn test_verify_checksum_fails_on_bit_flip() {
        let payload = b"data that will be corrupted in transit";
        let mut buf = Vec::new();
        {
            let mut writer = Scirs2Writer::new(&mut buf);
            writer
                .write_payload(PayloadType::Custom, payload, CompressionType::None)
                .expect("write failed");
        }

        // Flip the last byte of the payload section
        let last = buf.len() - 1;
        buf[last] ^= 0xFF;

        let cursor = Cursor::new(&buf);
        let mut reader = Scirs2Reader::new(cursor).expect("reader init (corrupted) failed");
        assert!(
            !reader.verify_checksum().expect("checksum check errored"),
            "checksum should fail after bit flip"
        );
    }

    #[test]
    fn test_version_fields_in_file() {
        let payload = b"version test";
        let mut buf = Vec::new();
        let mut writer = Scirs2Writer::new(&mut buf);
        writer
            .write_payload(PayloadType::Custom, payload, CompressionType::None)
            .expect("write failed");

        let cursor = Cursor::new(&buf);
        let reader = Scirs2Reader::new(cursor).expect("reader failed");
        assert_eq!(reader.header.version, (VERSION_MAJOR, VERSION_MINOR));
    }

    // ── array encode / decode (in-memory) ────────────────────────────────────

    #[test]
    fn test_encode_decode_f32_1d() {
        let original =
            Array1::<f32>::from_vec(vec![1.0, 2.5, -3.0, f32::MAX, f32::MIN_POSITIVE]).into_dyn();
        let encoded = encode_array(&original);
        let decoded = decode_array::<f32>(&encoded).expect("f32 decode failed");
        assert_eq!(original, decoded, "f32 1d roundtrip mismatch");
    }

    #[test]
    fn test_encode_decode_f64_2d() {
        let original = Array2::<f64>::from_shape_vec(
            (4, 6),
            (0..24)
                .map(|i| i as f64 * std::f64::consts::PI / 12.0)
                .collect(),
        )
        .expect("shape error")
        .into_dyn();

        let encoded = encode_array(&original);
        let decoded = decode_array::<f64>(&encoded).expect("f64 2d decode failed");
        assert_eq!(original, decoded, "f64 2d roundtrip mismatch");
    }

    #[test]
    fn test_encode_decode_i32_3d() {
        let original =
            Array3::<i32>::from_shape_vec((2, 3, 4), (0..24).map(|i| i as i32 - 12).collect())
                .expect("shape error")
                .into_dyn();

        let encoded = encode_array(&original);
        let decoded = decode_array::<i32>(&encoded).expect("i32 3d decode failed");
        assert_eq!(original, decoded, "i32 3d roundtrip mismatch");
    }

    #[test]
    fn test_encode_decode_i64_1d() {
        let original = Array1::<i64>::from_vec(vec![i64::MIN, -1, 0, 1, i64::MAX]).into_dyn();
        let encoded = encode_array(&original);
        let decoded = decode_array::<i64>(&encoded).expect("i64 decode failed");
        assert_eq!(original, decoded, "i64 roundtrip mismatch");
    }

    #[test]
    fn test_encode_decode_u32() {
        let original = Array1::<u32>::from_vec(vec![0, 1, u32::MAX / 2, u32::MAX]).into_dyn();
        let encoded = encode_array(&original);
        let decoded = decode_array::<u32>(&encoded).expect("u32 decode failed");
        assert_eq!(original, decoded, "u32 roundtrip mismatch");
    }

    #[test]
    fn test_encode_decode_u64() {
        let original = Array1::<u64>::from_vec(vec![0, 1, u64::MAX / 2, u64::MAX]).into_dyn();
        let encoded = encode_array(&original);
        let decoded = decode_array::<u64>(&encoded).expect("u64 decode failed");
        assert_eq!(original, decoded, "u64 roundtrip mismatch");
    }

    #[test]
    fn test_dtype_mismatch_error() {
        let original = Array1::<f32>::from_vec(vec![1.0, 2.0, 3.0]).into_dyn();
        let encoded = encode_array(&original); // dtype_id = 1 (f32)
                                               // Try to decode as f64 (dtype_id = 2)
        let result = decode_array::<f64>(&encoded);
        assert!(
            matches!(
                result,
                Err(SerializationError::TypeMismatch {
                    expected: 2,
                    actual: 1
                })
            ),
            "expected TypeMismatch error"
        );
    }

    #[test]
    fn test_encode_zero_dimensional_array() {
        // 0-dimensional array (scalar)
        let original = Array::<f64, IxDyn>::from_elem(IxDyn(&[]), 42.0);
        let encoded = encode_array(&original);
        let decoded = decode_array::<f64>(&encoded).expect("0d decode failed");
        assert_eq!(original, decoded, "0d array roundtrip mismatch");
    }

    // ── save_array / load_array (file I/O) ────────────────────────────────────

    #[test]
    fn test_save_load_f32_no_compression() {
        let tmp = std::env::temp_dir().join("scirs2_test_f32_nocomp.scirs2");
        let original =
            Array2::<f32>::from_shape_vec((8, 8), (0..64).map(|i| i as f32 * 0.5 - 16.0).collect())
                .expect("shape error")
                .into_dyn();

        save_array(&tmp, &original, CompressionType::None).expect("save_array failed");
        let loaded = load_array::<f32>(&tmp).expect("load_array failed");

        assert_eq!(original, loaded, "f32 save/load mismatch");
        std::fs::remove_file(&tmp).ok();
    }

    #[test]
    fn test_save_load_f64_no_compression() {
        let tmp = std::env::temp_dir().join("scirs2_test_f64_nocomp.scirs2");
        let original = Array1::<f64>::linspace(0.0, 1.0, 500).into_dyn();

        save_array(&tmp, &original, CompressionType::None).expect("save_array f64 failed");
        let loaded = load_array::<f64>(&tmp).expect("load_array f64 failed");

        assert_eq!(original, loaded, "f64 save/load mismatch");
        std::fs::remove_file(&tmp).ok();
    }

    #[test]
    fn test_save_load_empty_array() {
        let tmp = std::env::temp_dir().join("scirs2_test_empty.scirs2");
        let original = Array1::<f64>::from_vec(vec![]).into_dyn();

        save_array(&tmp, &original, CompressionType::None).expect("save empty failed");
        let loaded = load_array::<f64>(&tmp).expect("load empty failed");

        assert_eq!(original, loaded, "empty array roundtrip mismatch");
        std::fs::remove_file(&tmp).ok();
    }

    #[test]
    fn test_save_load_large_f64_array() {
        let tmp = std::env::temp_dir().join("scirs2_test_large_f64.scirs2");
        let n = 100_000usize;
        let original =
            Array1::<f64>::from_iter((0..n).map(|i| (i as f64 / n as f64).sin())).into_dyn();

        save_array(&tmp, &original, CompressionType::None).expect("save large failed");
        let loaded = load_array::<f64>(&tmp).expect("load large failed");

        assert_eq!(
            original.shape(),
            loaded.shape(),
            "shape mismatch for large array"
        );
        for (a, b) in original.iter().zip(loaded.iter()) {
            assert_eq!(
                a.to_bits(),
                b.to_bits(),
                "element mismatch in large array (bit-exact)"
            );
        }
        std::fs::remove_file(&tmp).ok();
    }

    #[test]
    fn test_save_load_3d_i32_array() {
        let tmp = std::env::temp_dir().join("scirs2_test_3d_i32.scirs2");
        let original =
            Array3::<i32>::from_shape_fn((5, 6, 7), |(i, j, k)| (i * 100 + j * 10 + k) as i32)
                .into_dyn();

        save_array(&tmp, &original, CompressionType::None).expect("save 3d i32 failed");
        let loaded = load_array::<i32>(&tmp).expect("load 3d i32 failed");

        assert_eq!(original, loaded, "3d i32 save/load mismatch");
        std::fs::remove_file(&tmp).ok();
    }

    #[test]
    fn test_wrong_payload_type_error() {
        let tmp = std::env::temp_dir().join("scirs2_test_wrong_type.scirs2");
        {
            let file = std::fs::File::create(&tmp).expect("create failed");
            let mut writer = Scirs2Writer::new(BufWriter::new(file));
            writer
                .write_payload(
                    PayloadType::Custom,
                    b"definitely not an array",
                    CompressionType::None,
                )
                .expect("write failed");
        }
        let result = load_array::<f64>(&tmp);
        assert!(
            result.is_err(),
            "load_array should fail when payload type is not Array"
        );
        std::fs::remove_file(&tmp).ok();
    }

    #[test]
    fn test_file_not_found_error() {
        let result = load_array::<f32>(Path::new("/nonexistent/path/does_not_exist.scirs2"));
        assert!(
            matches!(result, Err(SerializationError::Io(_))),
            "should return Io error for missing file"
        );
    }

    #[test]
    fn test_checksum_is_stored_in_file() {
        let tmp = std::env::temp_dir().join("scirs2_test_checksum_stored.scirs2");
        let original = Array1::<f64>::from_vec(vec![1.0, 2.0, 3.0]).into_dyn();
        save_array(&tmp, &original, CompressionType::None).expect("save failed");

        // Read and verify through Scirs2Reader
        let file = std::fs::File::open(&tmp).expect("open failed");
        let mut reader = Scirs2Reader::new(BufReader::new(file)).expect("reader failed");
        let ok = reader.verify_checksum().expect("checksum check failed");
        assert!(ok, "checksum should pass for freshly saved file");

        std::fs::remove_file(&tmp).ok();
    }

    #[test]
    fn test_lz4_compression_roundtrip() {
        let tmp = std::env::temp_dir().join("scirs2_test_lz4.scirs2");
        // Highly compressible data: a constant array
        let original = Array1::<f32>::from_elem(1000, 1.23456_f32).into_dyn();

        let result = save_array(&tmp, &original, CompressionType::Lz4);
        match result {
            Ok(()) => {
                let loaded = load_array::<f32>(&tmp).expect("load lz4 failed");
                assert_eq!(original, loaded, "lz4 roundtrip mismatch");
            }
            Err(SerializationError::Compression(_)) => {
                // LZ4 not available in this configuration — skip
                eprintln!("LZ4 not available, skipping lz4 test");
            }
            Err(e) => panic!("unexpected error during lz4 test: {}", e),
        }
        std::fs::remove_file(&tmp).ok();
    }

    #[test]
    fn test_zstd_compression_roundtrip() {
        let tmp = std::env::temp_dir().join("scirs2_test_zstd.scirs2");
        // Highly compressible data
        let original = Array2::<f64>::zeros((100, 100)).into_dyn();

        let result = save_array(&tmp, &original, CompressionType::Zstd);
        match result {
            Ok(()) => {
                let loaded = load_array::<f64>(&tmp).expect("load zstd failed");
                assert_eq!(original, loaded, "zstd roundtrip mismatch");
            }
            Err(SerializationError::Compression(_)) => {
                eprintln!("Zstd not available, skipping zstd test");
            }
            Err(e) => panic!("unexpected error during zstd test: {}", e),
        }
        std::fs::remove_file(&tmp).ok();
    }
}