scirs2-cluster 0.4.2

Clustering algorithms module for SciRS2 (scirs2-cluster)
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
//! Workflow management for clustering operations
//!
//! This module provides workflow management capabilities for complex
//! clustering pipelines with automatic saving, loading, and state management.

use crate::error::{ClusteringError, Result};
use serde::{Deserialize, Serialize};
use std::collections::HashMap;
use std::path::{Path, PathBuf};
use std::time::{SystemTime, UNIX_EPOCH};

use super::core::SerializableModel;

/// Comprehensive clustering workflow with state management
#[derive(Serialize, Deserialize, Debug, Clone)]
pub struct ClusteringWorkflow {
    /// Workflow identifier
    pub workflow_id: String,
    /// Current step in the workflow
    pub current_step: usize,
    /// All steps in the workflow
    pub steps: Vec<TrainingStep>,
    /// Current algorithm state
    pub current_state: AlgorithmState,
    /// Workflow configuration
    pub config: WorkflowConfig,
    /// Execution history
    pub execution_history: Vec<ExecutionRecord>,
    /// Intermediate results
    pub intermediate_results: HashMap<String, serde_json::Value>,
}

/// State of algorithm execution
#[derive(Serialize, Deserialize, Debug, Clone)]
pub enum AlgorithmState {
    /// Not started
    NotStarted,
    /// Currently running
    Running {
        /// Current iteration
        iteration: usize,
        /// Start time
        start_time: u64,
        /// Progress percentage (0-100)
        progress: f32,
    },
    /// Completed successfully
    Completed {
        /// Total iterations
        iterations: usize,
        /// Total execution time in seconds
        execution_time: f64,
        /// Final metrics
        final_metrics: HashMap<String, f64>,
    },
    /// Failed with error
    Failed {
        /// Error message
        error: String,
        /// Failure time
        failure_time: u64,
    },
    /// Paused
    Paused {
        /// Pause time
        pause_time: u64,
        /// Current iteration when paused
        paused_at_iteration: usize,
    },
}

/// Individual training step in workflow
#[derive(Serialize, Deserialize, Debug, Clone)]
pub struct TrainingStep {
    /// Step name/identifier
    pub name: String,
    /// Algorithm to use
    pub algorithm: String,
    /// Step parameters
    pub parameters: HashMap<String, serde_json::Value>,
    /// Dependencies on other steps
    pub dependencies: Vec<String>,
    /// Whether step is completed
    pub completed: bool,
    /// Step execution time
    pub execution_time: Option<f64>,
    /// Step results
    pub results: Option<serde_json::Value>,
}

/// Workflow configuration
#[derive(Serialize, Deserialize, Debug, Clone, Default)]
pub struct WorkflowConfig {
    /// Auto-save interval in seconds
    pub auto_save_interval: Option<u64>,
    /// Maximum retries for failed steps
    pub max_retries: usize,
    /// Timeout for individual steps in seconds
    pub step_timeout: Option<u64>,
    /// Enable parallel execution where possible
    pub parallel_execution: bool,
    /// Checkpoint directory
    pub checkpoint_dir: Option<PathBuf>,
}

/// Execution record for audit trail
#[derive(Serialize, Deserialize, Debug, Clone)]
pub struct ExecutionRecord {
    /// Timestamp of execution
    pub timestamp: u64,
    /// Step that was executed
    pub step_name: String,
    /// Action performed
    pub action: String,
    /// Execution result
    pub result: ExecutionResult,
    /// Additional metadata
    pub metadata: HashMap<String, serde_json::Value>,
}

/// Result of step execution
#[derive(Serialize, Deserialize, Debug, Clone)]
pub enum ExecutionResult {
    /// Successful execution
    Success {
        /// Execution time in seconds
        duration: f64,
        /// Output data
        output: Option<serde_json::Value>,
    },
    /// Failed execution
    Failure {
        /// Error message
        error: String,
        /// Error code
        error_code: Option<String>,
    },
    /// Skipped execution
    Skipped {
        /// Reason for skipping
        reason: String,
    },
}

impl ClusteringWorkflow {
    /// Create a new workflow
    pub fn new(workflow_id: String, config: WorkflowConfig) -> Self {
        Self {
            workflow_id,
            current_step: 0,
            steps: Vec::new(),
            current_state: AlgorithmState::NotStarted,
            config,
            execution_history: Vec::new(),
            intermediate_results: HashMap::new(),
        }
    }

    /// Add a step to the workflow
    pub fn add_step(&mut self, step: TrainingStep) {
        self.steps.push(step);
    }

    /// Execute the workflow
    pub fn execute(&mut self) -> Result<()> {
        self.current_state = AlgorithmState::Running {
            iteration: 0,
            start_time: SystemTime::now()
                .duration_since(UNIX_EPOCH)
                .unwrap_or_default()
                .as_secs(),
            progress: 0.0,
        };

        let start_time = std::time::Instant::now();

        let steps_len = self.steps.len();
        for i in 0..steps_len {
            self.current_step = i;

            // Check dependencies (clone to avoid borrow issues)
            let dependencies = self.steps[i].dependencies.clone();
            if !self.check_dependencies(&dependencies)? {
                return Err(ClusteringError::InvalidInput(format!(
                    "Dependencies not satisfied for step: {}",
                    self.steps[i].name
                )));
            }

            // Execute step
            let step_start = std::time::Instant::now();
            let step_clone = self.steps[i].clone();
            let result = self.execute_step(&step_clone)?;
            let step_duration = step_start.elapsed().as_secs_f64();

            // Update step results
            self.steps[i].completed = true;
            self.steps[i].execution_time = Some(step_duration);
            self.steps[i].results = Some(result.clone());

            // Record execution
            let step_name = self.steps[i].name.clone();
            self.record_execution(
                &step_name,
                "execute",
                ExecutionResult::Success {
                    duration: step_duration,
                    output: Some(result),
                },
            );

            // Update progress
            let progress = ((i + 1) as f32 / steps_len as f32) * 100.0;
            self.update_progress(progress);

            // Auto-save if configured
            if let Some(interval) = self.config.auto_save_interval {
                if step_duration > interval as f64 {
                    self.save_checkpoint()?;
                }
            }
        }

        let total_time = start_time.elapsed().as_secs_f64();
        self.current_state = AlgorithmState::Completed {
            iterations: self.steps.len(),
            execution_time: total_time,
            final_metrics: self.collect_final_metrics(),
        };

        Ok(())
    }

    /// Execute a single step
    fn execute_step(&mut self, step: &TrainingStep) -> Result<serde_json::Value> {
        // This would dispatch to the appropriate algorithm implementation
        // For now, return a placeholder result
        use serde_json::json;

        let result = match step.algorithm.as_str() {
            "kmeans" => {
                json!({
                    "algorithm": "kmeans",
                    "centroids": [[0.0, 0.0], [1.0, 1.0]],
                    "inertia": 0.5,
                    "iterations": 10
                })
            }
            "dbscan" => {
                json!({
                    "algorithm": "dbscan",
                    "n_clusters": 2,
                    "core_samples": [0, 1, 2],
                    "noise_points": []
                })
            }
            _ => {
                return Err(ClusteringError::InvalidInput(format!(
                    "Unknown algorithm: {}",
                    step.algorithm
                )));
            }
        };

        // Store intermediate result
        self.intermediate_results
            .insert(step.name.clone(), result.clone());

        Ok(result)
    }

    /// Check if step dependencies are satisfied
    fn check_dependencies(&self, dependencies: &[String]) -> Result<bool> {
        for dep in dependencies {
            if !self.steps.iter().any(|s| s.name == *dep && s.completed) {
                return Ok(false);
            }
        }
        Ok(true)
    }

    /// Update workflow progress
    fn update_progress(&mut self, progress: f32) {
        if let AlgorithmState::Running {
            iteration,
            start_time,
            ..
        } = &mut self.current_state
        {
            self.current_state = AlgorithmState::Running {
                iteration: *iteration + 1,
                start_time: *start_time,
                progress,
            };
        }
    }

    /// Record execution event
    fn record_execution(&mut self, step_name: &str, action: &str, result: ExecutionResult) {
        let record = ExecutionRecord {
            timestamp: SystemTime::now()
                .duration_since(UNIX_EPOCH)
                .unwrap_or_default()
                .as_secs(),
            step_name: step_name.to_string(),
            action: action.to_string(),
            result,
            metadata: HashMap::new(),
        };

        self.execution_history.push(record);
    }

    /// Collect final metrics from all completed steps
    fn collect_final_metrics(&self) -> HashMap<String, f64> {
        let mut metrics = HashMap::new();

        let total_steps = self.steps.len() as f64;
        let completed_steps = self.steps.iter().filter(|s| s.completed).count() as f64;
        let total_time: f64 = self.steps.iter().filter_map(|s| s.execution_time).sum();

        metrics.insert("total_steps".to_string(), total_steps);
        metrics.insert("completed_steps".to_string(), completed_steps);
        metrics.insert("completion_rate".to_string(), completed_steps / total_steps);
        metrics.insert("total_execution_time".to_string(), total_time);

        metrics
    }

    /// Save workflow checkpoint
    pub fn save_checkpoint(&self) -> Result<()> {
        if let Some(ref checkpoint_dir) = self.config.checkpoint_dir {
            std::fs::create_dir_all(checkpoint_dir)
                .map_err(|e| ClusteringError::InvalidInput(e.to_string()))?;

            let checkpoint_file =
                checkpoint_dir.join(format!("{}_checkpoint.json", self.workflow_id));
            self.save_to_file(checkpoint_file)?;
        }

        Ok(())
    }

    /// Load workflow from checkpoint
    pub fn load_checkpoint<P: AsRef<Path>>(path: P) -> Result<Self> {
        Self::load_from_file(path)
    }

    /// Pause workflow execution
    pub fn pause(&mut self) {
        let current_iteration = match &self.current_state {
            AlgorithmState::Running { iteration, .. } => *iteration,
            _ => 0,
        };

        self.current_state = AlgorithmState::Paused {
            pause_time: SystemTime::now()
                .duration_since(UNIX_EPOCH)
                .unwrap_or_default()
                .as_secs(),
            paused_at_iteration: current_iteration,
        };
    }

    /// Resume workflow execution
    pub fn resume(&mut self) -> Result<()> {
        if let AlgorithmState::Paused {
            paused_at_iteration,
            ..
        } = &self.current_state
        {
            self.current_state = AlgorithmState::Running {
                iteration: *paused_at_iteration,
                start_time: SystemTime::now()
                    .duration_since(UNIX_EPOCH)
                    .unwrap_or_default()
                    .as_secs(),
                progress: (*paused_at_iteration as f32 / self.steps.len() as f32) * 100.0,
            };

            // Continue execution from where we left off
            self.execute_remaining_steps()
        } else {
            Err(ClusteringError::InvalidInput(
                "Workflow is not in paused state".to_string(),
            ))
        }
    }

    /// Execute remaining steps after resume
    fn execute_remaining_steps(&mut self) -> Result<()> {
        let start_index = self.current_step;

        let steps_len = self.steps.len();
        for i in start_index..steps_len {
            if !self.steps[i].completed {
                self.current_step = i;
                let step_start = std::time::Instant::now();
                let step_clone = self.steps[i].clone();
                let result = self.execute_step(&step_clone)?;
                let step_duration = step_start.elapsed().as_secs_f64();

                self.steps[i].completed = true;
                self.steps[i].execution_time = Some(step_duration);
                self.steps[i].results = Some(result.clone());

                let step_name = self.steps[i].name.clone();
                self.record_execution(
                    &step_name,
                    "resume_execute",
                    ExecutionResult::Success {
                        duration: step_duration,
                        output: Some(result),
                    },
                );
            }
        }

        let final_metrics = self.collect_final_metrics();
        self.current_state = AlgorithmState::Completed {
            iterations: self.steps.len(),
            execution_time: final_metrics
                .get("total_execution_time")
                .copied()
                .unwrap_or(0.0),
            final_metrics,
        };

        Ok(())
    }

    /// Get workflow progress as percentage
    pub fn get_progress(&self) -> f32 {
        match &self.current_state {
            AlgorithmState::Running { progress, .. } => *progress,
            AlgorithmState::Completed { .. } => 100.0,
            AlgorithmState::Failed { .. } => 0.0,
            AlgorithmState::Paused {
                paused_at_iteration,
                ..
            } => (*paused_at_iteration as f32 / self.steps.len() as f32) * 100.0,
            AlgorithmState::NotStarted => 0.0,
        }
    }

    /// Get detailed workflow status
    pub fn get_status(&self) -> WorkflowStatus {
        WorkflowStatus {
            workflow_id: self.workflow_id.clone(),
            current_step: self.current_step,
            total_steps: self.steps.len(),
            state: self.current_state.clone(),
            progress: self.get_progress(),
            completed_steps: self.steps.iter().filter(|s| s.completed).count(),
        }
    }
}

impl SerializableModel for ClusteringWorkflow {}

/// Workflow status information
#[derive(Serialize, Deserialize, Debug, Clone)]
pub struct WorkflowStatus {
    /// Workflow identifier
    pub workflow_id: String,
    /// Current step index
    pub current_step: usize,
    /// Total number of steps
    pub total_steps: usize,
    /// Current algorithm state
    pub state: AlgorithmState,
    /// Progress percentage
    pub progress: f32,
    /// Number of completed steps
    pub completed_steps: usize,
}

/// Workflow manager for handling multiple workflows
#[derive(Serialize, Deserialize, Debug, Clone)]
pub struct ClusteringWorkflowManager {
    /// Active workflows
    pub workflows: HashMap<String, ClusteringWorkflow>,
    /// Manager configuration
    pub config: ManagerConfig,
}

/// Configuration for workflow manager
#[derive(Serialize, Deserialize, Debug, Clone)]
pub struct ManagerConfig {
    /// Maximum number of concurrent workflows
    pub max_concurrent_workflows: usize,
    /// Default checkpoint directory
    pub default_checkpoint_dir: Option<PathBuf>,
    /// Auto-save interval for all workflows
    pub global_auto_save_interval: Option<u64>,
}

impl Default for ManagerConfig {
    fn default() -> Self {
        Self {
            max_concurrent_workflows: 10,
            default_checkpoint_dir: None,
            global_auto_save_interval: Some(300), // 5 minutes
        }
    }
}

impl ClusteringWorkflowManager {
    /// Create a new workflow manager
    pub fn new(config: ManagerConfig) -> Self {
        Self {
            workflows: HashMap::new(),
            config,
        }
    }

    /// Add a workflow to the manager
    pub fn add_workflow(&mut self, workflow: ClusteringWorkflow) -> Result<()> {
        if self.workflows.len() >= self.config.max_concurrent_workflows {
            return Err(ClusteringError::InvalidInput(
                "Maximum number of concurrent workflows reached".to_string(),
            ));
        }

        self.workflows
            .insert(workflow.workflow_id.clone(), workflow);
        Ok(())
    }

    /// Get workflow by ID
    pub fn get_workflow(&self, workflow_id: &str) -> Option<&ClusteringWorkflow> {
        self.workflows.get(workflow_id)
    }

    /// Get mutable workflow by ID
    pub fn get_workflow_mut(&mut self, workflow_id: &str) -> Option<&mut ClusteringWorkflow> {
        self.workflows.get_mut(workflow_id)
    }

    /// Execute a specific workflow
    pub fn execute_workflow(&mut self, workflow_id: &str) -> Result<()> {
        if let Some(workflow) = self.workflows.get_mut(workflow_id) {
            workflow.execute()
        } else {
            Err(ClusteringError::InvalidInput(format!(
                "Workflow not found: {}",
                workflow_id
            )))
        }
    }

    /// Get status of all workflows
    pub fn get_all_statuses(&self) -> HashMap<String, WorkflowStatus> {
        self.workflows
            .iter()
            .map(|(id, workflow)| (id.clone(), workflow.get_status()))
            .collect()
    }

    /// Remove completed workflows
    pub fn cleanup_completed(&mut self) {
        self.workflows.retain(|_, workflow| {
            !matches!(workflow.current_state, AlgorithmState::Completed { .. })
        });
    }
}

/// Auto-save configuration
#[derive(Serialize, Deserialize, Debug, Clone)]
pub struct AutoSaveConfig {
    /// Enable auto-save
    pub enabled: bool,
    /// Save interval in seconds
    pub interval_seconds: u64,
    /// Directory for auto-save files
    pub save_directory: PathBuf,
}

impl Default for AutoSaveConfig {
    fn default() -> Self {
        Self {
            enabled: true,
            interval_seconds: 300, // 5 minutes
            save_directory: PathBuf::from("./checkpoints"),
        }
    }
}

/// Workflow execution state
#[derive(Serialize, Deserialize, Debug, Clone, PartialEq)]
pub enum WorkflowState {
    /// Workflow created but not started
    Created,
    /// Workflow is running
    Running,
    /// Workflow paused
    Paused,
    /// Workflow completed successfully
    Completed,
    /// Workflow failed with error
    Failed(String),
    /// Workflow was cancelled
    Cancelled,
}

/// Result of a workflow step
#[derive(Serialize, Deserialize, Debug, Clone)]
pub enum StepResult {
    /// Step completed successfully
    Success {
        /// Output data from the step
        output: serde_json::Value,
        /// Execution metrics
        metrics: HashMap<String, f64>,
    },
    /// Step failed
    Failure {
        /// Error message
        error: String,
        /// Error details
        details: Option<serde_json::Value>,
    },
    /// Step was skipped
    Skipped {
        /// Reason for skipping
        reason: String,
    },
}

/// Workflow step definition
#[derive(Serialize, Deserialize, Debug, Clone)]
pub struct WorkflowStep {
    /// Step name/identifier
    pub name: String,
    /// Step type/algorithm
    pub step_type: String,
    /// Step parameters
    pub parameters: HashMap<String, serde_json::Value>,
    /// Dependencies on other steps
    pub dependencies: Vec<String>,
    /// Expected execution time (optional)
    pub expected_duration: Option<f64>,
}

#[cfg(test)]
mod tests {
    use super::*;

    #[test]
    fn test_workflow_creation() {
        let config = WorkflowConfig {
            auto_save_interval: Some(60),
            max_retries: 3,
            step_timeout: Some(300),
            parallel_execution: false,
            checkpoint_dir: None,
        };

        let workflow = ClusteringWorkflow::new("test_workflow".to_string(), config);
        assert_eq!(workflow.workflow_id, "test_workflow");
        assert_eq!(workflow.current_step, 0);
        assert!(workflow.steps.is_empty());
    }

    #[test]
    fn test_workflow_step_addition() {
        let config = WorkflowConfig {
            auto_save_interval: None,
            max_retries: 1,
            step_timeout: None,
            parallel_execution: false,
            checkpoint_dir: None,
        };

        let mut workflow = ClusteringWorkflow::new("test".to_string(), config);

        let step = TrainingStep {
            name: "kmeans_step".to_string(),
            algorithm: "kmeans".to_string(),
            parameters: HashMap::new(),
            dependencies: Vec::new(),
            completed: false,
            execution_time: None,
            results: None,
        };

        workflow.add_step(step);
        assert_eq!(workflow.steps.len(), 1);
        assert_eq!(workflow.steps[0].name, "kmeans_step");
    }

    #[test]
    fn test_workflow_manager() {
        let config = ManagerConfig::default();
        let mut manager = ClusteringWorkflowManager::new(config);

        let workflow_config = WorkflowConfig {
            auto_save_interval: None,
            max_retries: 1,
            step_timeout: None,
            parallel_execution: false,
            checkpoint_dir: None,
        };

        let workflow = ClusteringWorkflow::new("test_workflow".to_string(), workflow_config);
        manager.add_workflow(workflow).expect("Operation failed");

        assert!(manager.get_workflow("test_workflow").is_some());
        assert_eq!(manager.workflows.len(), 1);
    }
}