[
{
"id": "test_locus",
"contig": "test_genome",
"start": 100000,
"end": 100018,
"motif": "CAGATA",
"left_flank": "TCGACGGGCAAACTCTTAAGGGGATAAATGCCCCTAGGGGTATGGTAATAAAAAGCCTATATTCCATGTTCCTTTAATTATTTTTAGTATACAATCTGTGGGTAACCTCGTTGGAGACTCTCACTTCAATTCGGGTCTCGTGGACCCTTACTACTTAACGCCCAATCTAAACCGACTCTAAAAATCCTAAGGATTTTTGGACGGCTCCCTTTCCTTCAGTAAATGACGTCTTTTGGTGTACCGTCGCTGCCCTTATGGACCGTATTCTTATGTCCAGTAGACTGCCACCAAACTGCATGCGCCCAAGAACGCATGCGTGATGCGTCTTCAGCGATGTTGAACGTCCCCTTTCATCACCGGATAAGCATGCTAGATAAGAGTCCATCAACAACGAGCCTAGGTTGCTCATCGATGCCAAGCTCGAACCGTGTGCTGCAGCAGAGGAGTACCAGTGGGACACTCACGGCAACAGATAAGTATGACAGACCCAGCTTAAGTGCGATCAAGTGTGCCCGGGGGAACGGGGCCTCTACCGCGGAAATTAAGTTCTGTCTCATTCGGAGCTGTTTAATGATTTCCCGTCTAGAGCAATTTAACATATTAATGGGGATCCACAGCAGAAATGCCTACACCTGATCAGTCTGTGCGCGTTAGGAAGACGCGCCGAGGTCTATGGAGTGTCATGAGTTCACCTTGATATTAACATCTACAGCAACCTACTTGTATACCAAGCAGGTGTACCGGCCCCTGGAGACGTTGAGAGCTATGCACCTGCGACGAACACAAGAGTCGGGGGGCAAGGAGCGGGGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATCCTACCGCATTATGTATGCTTACGCCACCAAATAGAATTGGCTTCATGAAGAAATGGATTCCGAGATACCAGCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTGACACTCTTTCTGGCCATGTAGAGTTCTGGACACAAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGTCAAACCAACATACTGACCTGACCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGT",
"right_flank": "CCGAGGACGTCAAGGATGTTTGTGTATCGAGGCAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTGTCCTACAATACGATTGAGTATAAGGGGATGCGTTACTCGATCTTCCTTAATTACAATGAAGCCCTATCCTTTAAAAATCTAAGCGCCGAACCAGTCGAAACCAGGTCCTATATAGGCCCCTACAGAATAAAGGGAGTACTCAGACGGTATGACCTGGCAGGACTTACTTAGGACGACATCCTCCTCAGGTAGGTCTACTTACGCAGCTTAGTGTACTGAGACTACTACCAATTGAACATTCACACCTTGCGACGCTTCAGACACCGTATGTTTATACGTTTAGGTCCGAGACCTGTGTAAGTAACCGATTTGCCGACGTTTTAGCTTCATAGTGCTTCGGGCTAAGACAAAGGATCGAGGGACCGCCTGCCATGATAGATGAGATCCGGCTGCCAGCATAACAGCAATGCACAGGTACGGGTAGGCGATTGAAGGTATTGTCGCCGCCCGAAAAGTCTTAGGTTCCATTTAGAGATCTCCCGGCCAGAATTTCACAGCTCGTCTGTGTTCGACAACGAGATCGCCTAGCCAAGTTACTACCAGGATTGTGTACCATCCCCACCGGCAAATTGATGAGTCGCGGATTCACGAGCGTCCGTGCCTTGAGGCAGATTGTTAAAAGCAGTGGACATAGCTAACGTGCGTCATTATTGAGCAGTAGCTATGGAACAATGGTTGTAGTTAGTACCCAGCATGCCCATTTGCACGTACTGAATGTCTGCATTCGATTGCCCACCCGTCATGGTATCATATCCAACCCGCCTCACCCCAGGACGGTGGTTCCCTTACGAGGGCCGCCCCTTAACTAGCTAGAGTCGATGGTCAGTCGTATGTCCAACTGGCAAGTAAGCCACCTATCGGCCCCCGCTATAAGCCAAGGTCACCGACAAAGTTATCGCATTCGCCACTTACCGATATTTTGGTTAGCCAGTCCCTCACTTCTATCTCAATAGGGGGGGCCTTGTCATACGATGTGCGGGACCAACCTACAATAGCGGTTATTAGGTGCGGTACTACAGCACCGTAGTGCGATGTGTGCTTACCAGAGTACGCGAAAGCTCGATGTTTTGACAACTTAACGGACCGAGGACAAGGCGCAATAAGACTATCAAATCACCTCATCGGCTCACGAAACTTGATCAGAGGCCAGGAGGTACAAAACATACTCTACTATCCCGCTTCCTGAACAGCGGGTGTATCTACTCGATGTCCGTTCGCAGCTTTGTAAAGTTC",
"reads": [
{
"qname": "test_genome-hap13547",
"source_contig": "test_genome",
"source_pos": 100350,
"mapq": 60,
"seq": "TACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 332): 0)"
]
},
{
"qname": "test_genome-hap13547",
"source_contig": "test_genome",
"source_pos": 100080,
"mapq": 60,
"seq": "GATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTGGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 62): 1)"
]
},
{
"qname": "test_genome-hap17893",
"source_contig": "test_genome",
"source_pos": 99307,
"mapq": 60,
"seq": "GGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATCCTACCGCATTATGTATGCTTACGCCACC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -693): 0)"
]
},
{
"qname": "test_genome-hap17893",
"source_contig": "test_genome",
"source_pos": 99614,
"mapq": 60,
"seq": "AACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCATTGTGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCGGGAATACTCGCTAGTGGCCCCATGCCAACGATTGATGCTT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -386): 1)"
]
},
{
"qname": "test_genome-hap217699",
"source_contig": "test_genome",
"source_pos": 100342,
"mapq": 60,
"seq": "GCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 324): 0)"
]
},
{
"qname": "test_genome-hap217699",
"source_contig": "test_genome",
"source_pos": 100118,
"mapq": 60,
"seq": "TGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 100): 0)"
]
},
{
"qname": "test_genome-hap111089",
"source_contig": "test_genome",
"source_pos": 99688,
"mapq": 60,
"seq": "ATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATGGGAGGTTGTTACATGACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCTAGAAAGAGTGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -312): 1)"
]
},
{
"qname": "test_genome-hap111089",
"source_contig": "test_genome",
"source_pos": 99414,
"mapq": 60,
"seq": "TACGTTCGTGATATCCTACCGCATTATGTATGCTTACGCCACCAAATAGAATTGGCTTCATGAAGAAATGGATTCCGAGATACCAGCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -586): 0)"
]
},
{
"qname": "test_genome-hap111353",
"source_contig": "test_genome",
"source_pos": 99968,
"mapq": 60,
"seq": "TTTTGCTGTTTTTTGGTCCTCAAGGTCTTCGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTTGACGTCCTCGGTATCTGTATCTGTATCTGACGCTATCTTCACGACCCGACTTGTGGGCTTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -50): 21)"
]
},
{
"qname": "test_genome-hap111353",
"source_contig": "test_genome",
"source_pos": 99716,
"mapq": 60,
"seq": "GACACAAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -284): 0)"
]
},
{
"qname": "test_genome-hap28081",
"source_contig": "test_genome",
"source_pos": 100465,
"mapq": 60,
"seq": "ATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTCAGCTGCGTAAGTAGACCTACCTGAGGAG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 447): 1)"
]
},
{
"qname": "test_genome-hap28081",
"source_contig": "test_genome",
"source_pos": 100129,
"mapq": 60,
"seq": "ACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACAGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 111): 1)"
]
},
{
"qname": "test_genome-hap27643",
"source_contig": "test_genome",
"source_pos": 99932,
"mapq": 60,
"seq": "CTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -68): 0)"
]
},
{
"qname": "test_genome-hap27643",
"source_contig": "test_genome",
"source_pos": 99932,
"mapq": 0,
"seq": "CTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Reverse, 3): 0)"
]
},
{
"qname": "test_genome-hap24579",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 5): 0)"
]
},
{
"qname": "test_genome-hap24579",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "AGGTACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACATAAACAGATAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -149): 3)",
"(WithinRepeat(Forward, 1): 3)"
]
},
{
"qname": "test_genome-hap12021",
"source_contig": "test_genome",
"source_pos": 99918,
"mapq": 60,
"seq": "ACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACCGAGGACGTCAAGGAGGTTTGTGTATCGAGGCAAGCGCAAATACCTAGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -82): 33)"
]
},
{
"qname": "test_genome-hap12021",
"source_contig": "test_genome",
"source_pos": 100241,
"mapq": 60,
"seq": "ACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTCATTGTAATTAAGGAAGATCGAGTAACGCATCGCCTTATACTCAATCGTATTGTAGGACACGGCCCGCCGCGGTTTGAAGGCACGCGCAACAACAGGTGACT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 223): 3)"
]
},
{
"qname": "test_genome-hap211581",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 60,
"seq": "ACCACATTTTGCTGTTTTTTGGTCCTCAAGGTCTTCGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTTGACGTCCTCGGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -44): 0)"
]
},
{
"qname": "test_genome-hap211581",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "AGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACTGATACAGATACAGATACAGATACAGATACAGATAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -149): 1)",
"(WithinRepeat(Forward, 1): 1)"
]
},
{
"qname": "test_genome-hap213871",
"source_contig": "test_genome",
"source_pos": 99709,
"mapq": 60,
"seq": "CGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATGGGAGGTTGTTACATGCCGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -291): 1)"
]
},
{
"qname": "test_genome-hap213871",
"source_contig": "test_genome",
"source_pos": 99371,
"mapq": 60,
"seq": "TTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATCCTACCGCATTATGTATGCTTACGCCACCAAACAGAATTGGCTTCATGAAGAAATGGATTCCGAGATACCAGCTACACTTCACTGAATGGATC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -629): 2)"
]
},
{
"qname": "test_genome-hap25199",
"source_contig": "test_genome",
"source_pos": 100181,
"mapq": 60,
"seq": "GGAAGATCGAGTAACGCATCCCCTTATACTCAATCGTATTGTAGGACACAGCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 163): 0)"
]
},
{
"qname": "test_genome-hap25199",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "AGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATTC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -149): 1)",
"(WithinRepeat(Forward, 1): 1)"
]
},
{
"qname": "test_genome-hap25107",
"source_contig": "test_genome",
"source_pos": 99905,
"mapq": 0,
"seq": "TATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 0): 0)"
]
},
{
"qname": "test_genome-hap25107",
"source_contig": "test_genome",
"source_pos": 99905,
"mapq": 60,
"seq": "CCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGTTACAGATACAGATACAGATACAGATACAGATACTGATACAGATACAGATAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -95): 2)"
]
},
{
"qname": "test_genome-hap25319",
"source_contig": "test_genome",
"source_pos": 99506,
"mapq": 60,
"seq": "TTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -494): 0)"
]
},
{
"qname": "test_genome-hap25319",
"source_contig": "test_genome",
"source_pos": 99809,
"mapq": 60,
"seq": "GTTTACTGGATTTGCCCGAATAATCAGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -191): 0)"
]
},
{
"qname": "test_genome-hap14757",
"source_contig": "test_genome",
"source_pos": 100002,
"mapq": 60,
"seq": "GATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGGCAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, -16): 0)"
]
},
{
"qname": "test_genome-hap14757",
"source_contig": "test_genome",
"source_pos": 100330,
"mapq": 60,
"seq": "GACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTCATTGTAATTTAG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 312): 1)"
]
},
{
"qname": "test_genome-hap18399",
"source_contig": "test_genome",
"source_pos": 99721,
"mapq": 60,
"seq": "AGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATGGGAGGTTGTTACATGACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -279): 0)"
]
},
{
"qname": "test_genome-hap18399",
"source_contig": "test_genome",
"source_pos": 99534,
"mapq": 60,
"seq": "TCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCAACAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -466): 1)"
]
},
{
"qname": "test_genome-hap22661",
"source_contig": "test_genome",
"source_pos": 100465,
"mapq": 60,
"seq": "ATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 447): 0)"
]
},
{
"qname": "test_genome-hap22661",
"source_contig": "test_genome",
"source_pos": 100162,
"mapq": 60,
"seq": "CATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTGTCCTACAATACGATTGAGTATAAGGGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 144): 0)"
]
},
{
"qname": "test_genome-hap26035",
"source_contig": "test_genome",
"source_pos": 99598,
"mapq": 60,
"seq": "TTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTGACACTCTTTCTGGCCATGTAGAGTTCTGGACACAAAGATTGTGCCCAAGGATTGGTGTTT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -402): 0)"
]
},
{
"qname": "test_genome-hap26035",
"source_contig": "test_genome",
"source_pos": 99968,
"mapq": 60,
"seq": "TCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGACGCTATCTTCACGACCCGACTTGTGGGCTTA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -32): 0)"
]
},
{
"qname": "test_genome-hap18165",
"source_contig": "test_genome",
"source_pos": 99823,
"mapq": 60,
"seq": "GCTTATGCTGGCGTGTTTACTGGATTTGCCCGAATAATCAGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -177): 0)"
]
},
{
"qname": "test_genome-hap18165",
"source_contig": "test_genome",
"source_pos": 99600,
"mapq": 60,
"seq": "TGCTGCGGAAAATATAGCATCAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTGACACTCTTTCTGGCCATGTAGAGTTCTGGACACAAAGATTGTGCCCAAGGATTGGTGTTTCA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -400): 1)"
]
},
{
"qname": "test_genome-hap15187",
"source_contig": "test_genome",
"source_pos": 99644,
"mapq": 60,
"seq": "CGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTGACACTCTTTCTGGCCATGTAGAGTTCTGGACACAAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -356): 0)"
]
},
{
"qname": "test_genome-hap15187",
"source_contig": "test_genome",
"source_pos": 99981,
"mapq": 60,
"seq": "GTAACCGACCACATTTTGCTGTTTTTTGGTCCTCAAGGTCTTCGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTTGACGTCCTCGGTATCTGTATCTGTATCTGACGCCATCTTCACGACCCG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -37): 15)"
]
},
{
"qname": "test_genome-hap11243",
"source_contig": "test_genome",
"source_pos": 100367,
"mapq": 60,
"seq": "ATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 349): 0)"
]
},
{
"qname": "test_genome-hap11243",
"source_contig": "test_genome",
"source_pos": 99972,
"mapq": 60,
"seq": "CCCACGAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGGCAAGTGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -46): 21)"
]
},
{
"qname": "test_genome-hap218633",
"source_contig": "test_genome",
"source_pos": 100083,
"mapq": 60,
"seq": "GGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATGGACATAGAAGCAATTAGAAAAGTAACCGACCACATTTTGCTGTTTTTTGGTCCTCAAGGTCTTCGATCC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 65): 0)"
]
},
{
"qname": "test_genome-hap218633",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "TACAGATACAGATACAGATACTGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 4): 1)"
]
},
{
"qname": "test_genome-hap25797",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "TACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Forward, 4): 0)"
]
},
{
"qname": "test_genome-hap25797",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 60,
"seq": "TTTTGGTCCTCAAGGTCTTCGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTTGACGTCCTCGGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTTTCTGTATCTGTATCTGTATCTG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -60): 1)"
]
},
{
"qname": "test_genome-hap210841",
"source_contig": "test_genome",
"source_pos": 99768,
"mapq": 60,
"seq": "GGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATGGGAGGTTGTTACATGACG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -232): 0)"
]
},
{
"qname": "test_genome-hap210841",
"source_contig": "test_genome",
"source_pos": 99483,
"mapq": 60,
"seq": "GGATTCCGAGATACCAGCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -517): 0)"
]
},
{
"qname": "test_genome-hap16335",
"source_contig": "test_genome",
"source_pos": 100136,
"mapq": 60,
"seq": "TAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 118): 0)"
]
},
{
"qname": "test_genome-hap16335",
"source_contig": "test_genome",
"source_pos": 100499,
"mapq": 60,
"seq": "GGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACTATTAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTTGTCTCAGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 481): 2)"
]
},
{
"qname": "test_genome-hap114035",
"source_contig": "test_genome",
"source_pos": 100607,
"mapq": 60,
"seq": "CTAAATGGAACCTAAGACTTTTCGGGCGGCGACAATACCTTCAATCGCCTACCCGTACCTGTGCATTTCTGTTATGCTGGCAGCCGGATCTCATCTATCATGGCAGGCGGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACTATGAAGCT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 589): 1)"
]
},
{
"qname": "test_genome-hap114035",
"source_contig": "test_genome",
"source_pos": 100231,
"mapq": 60,
"seq": "CCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTGTCCTACAATACGATTGAGTATAAGGGGATGCGTTACTCGATCTTCCTTAATTACAATGTAGCCCTATCCTTTAAAAATCTAAGCGCCGAACCAGTC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 213): 1)"
]
},
{
"qname": "test_genome-hap212887",
"source_contig": "test_genome",
"source_pos": 100164,
"mapq": 60,
"seq": "TCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTGTCCTACAATACGATTGAGTATAAGGGGAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 146): 0)"
]
},
{
"qname": "test_genome-hap212887",
"source_contig": "test_genome",
"source_pos": 100489,
"mapq": 60,
"seq": "TCCTTTGTCTTAGCCCGAACCACTATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGGCTCAGTACACTAAGCT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 471): 2)"
]
},
{
"qname": "test_genome-hap214937",
"source_contig": "test_genome",
"source_pos": 100005,
"mapq": 0,
"seq": "CAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Forward, 0): 0)"
]
},
{
"qname": "test_genome-hap214937",
"source_contig": "test_genome",
"source_pos": 100005,
"mapq": 60,
"seq": "ATGGACATAGAAGCAATTAGAAAAGTAACCGACCACATTTTGATGTTTTTTGGTCCTCAAGGTCTTCGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTAGACGTCCTCGGTATCTGTATATGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -13): 3)"
]
},
{
"qname": "test_genome-hap2433",
"source_contig": "test_genome",
"source_pos": 99742,
"mapq": 60,
"seq": "GTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTATGCTACACGCGCCCAGTCAAACCAA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -258): 1)"
]
},
{
"qname": "test_genome-hap2433",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "TGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTCTCTGTATCTGTATCTGTATCTGTACCTGTATCTGTATCTGTATCTGTATC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Reverse, 2): 2)"
]
},
{
"qname": "test_genome-hap218411",
"source_contig": "test_genome",
"source_pos": 99911,
"mapq": 0,
"seq": "CTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTTTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 3): 1)"
]
},
{
"qname": "test_genome-hap218411",
"source_contig": "test_genome",
"source_pos": 99911,
"mapq": 60,
"seq": "AAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGAGACAGATACAGATACAGATACAGGTACAGATACAGATACAAATAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -89): 3)"
]
},
{
"qname": "test_genome-hap22641",
"source_contig": "test_genome",
"source_pos": 99722,
"mapq": 60,
"seq": "AAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -278): 0)"
]
},
{
"qname": "test_genome-hap22641",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "TGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Reverse, 2): 0)"
]
},
{
"qname": "test_genome-hap114965",
"source_contig": "test_genome",
"source_pos": 100477,
"mapq": 60,
"seq": "GCCCGAAGCACTATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGAC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 459): 0)"
]
},
{
"qname": "test_genome-hap114965",
"source_contig": "test_genome",
"source_pos": 100115,
"mapq": 60,
"seq": "AAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 97): 0)"
]
},
{
"qname": "test_genome-hap210927",
"source_contig": "test_genome",
"source_pos": 100150,
"mapq": 60,
"seq": "AATCGTATTGTAGGACACAGCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATGGA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 132): 0)"
]
},
{
"qname": "test_genome-hap210927",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "TACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGACACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 4): 1)"
]
},
{
"qname": "test_genome-hap113751",
"source_contig": "test_genome",
"source_pos": 99930,
"mapq": 60,
"seq": "TACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGGCATGCGCAAATACCTAGTCCTGGGGACGCA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -70): 38)"
]
},
{
"qname": "test_genome-hap113751",
"source_contig": "test_genome",
"source_pos": 100209,
"mapq": 60,
"seq": "TAGAAGGATAGGGCTTCATTGTAATTAAGGAAGATCGAGTAACGCATCCCCTTATACTCAATCGTATTGTAGGACACAGCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 191): 3)"
]
},
{
"qname": "test_genome-hap29011",
"source_contig": "test_genome",
"source_pos": 100003,
"mapq": 60,
"seq": "ATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGGCAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, -15): 0)"
]
},
{
"qname": "test_genome-hap29011",
"source_contig": "test_genome",
"source_pos": 100365,
"mapq": 60,
"seq": "GGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCCCTT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 347): 2)"
]
},
{
"qname": "test_genome-hap29559",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "TGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTATATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 2): 1)"
]
},
{
"qname": "test_genome-hap29559",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "AGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -149): 0)",
"(WithinRepeat(Forward, 1): 0)"
]
},
{
"qname": "test_genome-hap19991",
"source_contig": "test_genome",
"source_pos": 100346,
"mapq": 60,
"seq": "CTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 328): 0)"
]
},
{
"qname": "test_genome-hap19991",
"source_contig": "test_genome",
"source_pos": 100049,
"mapq": 60,
"seq": "GCAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTGCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 31): 1)"
]
},
{
"qname": "test_genome-hap114229",
"source_contig": "test_genome",
"source_pos": 100204,
"mapq": 60,
"seq": "AGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTGTCCTACAATACGATTGAGTATAAGGGGATGCGTTACTCGATCTTCCTTAATTACAATGAAGCCCTATCC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 186): 0)"
]
},
{
"qname": "test_genome-hap114229",
"source_contig": "test_genome",
"source_pos": 100529,
"mapq": 60,
"seq": "GGCAGCCGGATCTCATCTATCATGGCAGGCGGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACTATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACTGTGTCTGAAGCGTCGCAAGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 511): 1)"
]
},
{
"qname": "test_genome-hap15567",
"source_contig": "test_genome",
"source_pos": 99536,
"mapq": 60,
"seq": "TCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -464): 0)"
]
},
{
"qname": "test_genome-hap15567",
"source_contig": "test_genome",
"source_pos": 99769,
"mapq": 60,
"seq": "TGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATGGGAGGTTGTTACATGAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -231): 0)"
]
},
{
"qname": "test_genome-hap219305",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "TACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Forward, 4): 0)"
]
},
{
"qname": "test_genome-hap219305",
"source_contig": "test_genome",
"source_pos": 100099,
"mapq": 60,
"seq": "AGGTGACTCAGGCTCCGGCCCACCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATGGACATAGAAGCAATTAGAAAAGTGACCGACCACATTTTGCTGTTTTTTGGTCC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 81): 2)"
]
},
{
"qname": "test_genome-hap217163",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "CAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Forward, 0): 0)"
]
},
{
"qname": "test_genome-hap217163",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "TATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCGGTATCTGTATCTG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Reverse, 0): 1)"
]
},
{
"qname": "test_genome-hap116781",
"source_contig": "test_genome",
"source_pos": 99621,
"mapq": 60,
"seq": "ACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCGGGAATACTCGCTAGTGGCCCCATGCCAACGATT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -379): 0)"
]
},
{
"qname": "test_genome-hap116781",
"source_contig": "test_genome",
"source_pos": 99302,
"mapq": 60,
"seq": "AGAGGGGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCCTATCGAGTACCCGATTACGTTCGTGATATCCTACCGCATTATGTATGCTTACG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -698): 3)"
]
},
{
"qname": "test_genome-hap21691",
"source_contig": "test_genome",
"source_pos": 99510,
"mapq": 60,
"seq": "CTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGAC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -490): 0)"
]
},
{
"qname": "test_genome-hap21691",
"source_contig": "test_genome",
"source_pos": 99751,
"mapq": 60,
"seq": "GTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATGGGAGGTTGTTACATGACGTCACAACAGAACGGACC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -249): 0)"
]
},
{
"qname": "test_genome-hap12231",
"source_contig": "test_genome",
"source_pos": 99594,
"mapq": 60,
"seq": "ACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTGCAGTCTCGGGAATACTCGCTAGTGGCCCCATGCCAACGATTGATGCTTTATTTTCCGCAGCAAATTTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -406): 1)"
]
},
{
"qname": "test_genome-hap12231",
"source_contig": "test_genome",
"source_pos": 99294,
"mapq": 60,
"seq": "GAGCAAGGAGCGGGGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATCCTACCGCATTATGTA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -706): 1)"
]
},
{
"qname": "test_genome-hap2149",
"source_contig": "test_genome",
"source_pos": 100064,
"mapq": 60,
"seq": "TAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTTTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 46): 1)"
]
},
{
"qname": "test_genome-hap2149",
"source_contig": "test_genome",
"source_pos": 100333,
"mapq": 60,
"seq": "GTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTCGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTCATTGTAATT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 315): 1)"
]
},
{
"qname": "test_genome-hap29163",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -149): 0)",
"(WithinRepeat(Reverse, 1): 0)"
]
},
{
"qname": "test_genome-hap29163",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "GAAACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 2): 1)"
]
},
{
"qname": "test_genome-hap210127",
"source_contig": "test_genome",
"source_pos": 99654,
"mapq": 60,
"seq": "ATATCAAAAGCGTCCATGGGAGGTTGTTACATGACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -346): 0)"
]
},
{
"qname": "test_genome-hap210127",
"source_contig": "test_genome",
"source_pos": 99233,
"mapq": 60,
"seq": "AGGTGTACCGGCCCCTGGAGACGTTGAGAGCTATGCACCTGCGACGAACACAAGAGTCGGGGGGCAAGGAGCGGGGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -767): 0)"
]
},
{
"qname": "test_genome-hap216251",
"source_contig": "test_genome",
"source_pos": 99734,
"mapq": 60,
"seq": "AAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCCTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -266): 1)"
]
},
{
"qname": "test_genome-hap216251",
"source_contig": "test_genome",
"source_pos": 99956,
"mapq": 60,
"seq": "TCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGACGCTATCTTCACGACCCGACTTGTGGGCTTATGCTGGCGTGTT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -44): 0)"
]
},
{
"qname": "test_genome-hap1159",
"source_contig": "test_genome",
"source_pos": 99935,
"mapq": 60,
"seq": "CCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTTGACGTCCTCGGTATCTGTATCTGTATCTGACGCTATCTTCACGACCCGACTTGTGGGCTTATGCTGGCGTGTTTACTGGATTTGCCCGAATAAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -65): 41)"
]
},
{
"qname": "test_genome-hap1159",
"source_contig": "test_genome",
"source_pos": 99636,
"mapq": 60,
"seq": "GCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTGACACTCTTTCTGGCCATGTAGAGTTCTGGACACAAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -364): 0)"
]
},
{
"qname": "test_genome-hap112447",
"source_contig": "test_genome",
"source_pos": 99786,
"mapq": 60,
"seq": "TCAGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -214): 0)"
]
},
{
"qname": "test_genome-hap112447",
"source_contig": "test_genome",
"source_pos": 99535,
"mapq": 60,
"seq": "CTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -465): 0)"
]
},
{
"qname": "test_genome-hap13787",
"source_contig": "test_genome",
"source_pos": 100055,
"mapq": 60,
"seq": "GCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 37): 0)"
]
},
{
"qname": "test_genome-hap13787",
"source_contig": "test_genome",
"source_pos": 100364,
"mapq": 60,
"seq": "GCTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTCTATAGGACCTGGTTTCGACTGGTTCGGCGCTTA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 346): 2)"
]
},
{
"qname": "test_genome-hap211959",
"source_contig": "test_genome",
"source_pos": 99713,
"mapq": 60,
"seq": "CTGGACACAAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -287): 0)"
]
},
{
"qname": "test_genome-hap211959",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "TGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Reverse, 2): 0)"
]
},
{
"qname": "test_genome-hap216659",
"source_contig": "test_genome",
"source_pos": 99570,
"mapq": 60,
"seq": "TGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCGGGAATACTCGCTAGTGGCCCCATGCCAACGATTGATGCTTTATTGTCCGCAGCAAATTTAGCTGGTCAATGGGCCACGGAACGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -430): 1)"
]
},
{
"qname": "test_genome-hap216659",
"source_contig": "test_genome",
"source_pos": 99338,
"mapq": 60,
"seq": "CAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATCCTACCGCATTATGTATGCTTACGCCACCAAATAGAATTGGCTTCATGAAGAAATGGATT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -662): 0)"
]
},
{
"qname": "test_genome-hap211917",
"source_contig": "test_genome",
"source_pos": 100437,
"mapq": 60,
"seq": "ACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 419): 0)"
]
},
{
"qname": "test_genome-hap211917",
"source_contig": "test_genome",
"source_pos": 100055,
"mapq": 60,
"seq": "GCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAATCGACTGAGATCA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 37): 1)"
]
},
{
"qname": "test_genome-hap115661",
"source_contig": "test_genome",
"source_pos": 99317,
"mapq": 60,
"seq": "TTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATCCTACCGCATTATGTATGCTTACGCCACCAAATAGAATT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -683): 0)"
]
},
{
"qname": "test_genome-hap115661",
"source_contig": "test_genome",
"source_pos": 99625,
"mapq": 60,
"seq": "CAGGACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCTGGAATACTCGCTAGTGGCCCCATGCCAAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -375): 2)"
]
},
{
"qname": "test_genome-hap114497",
"source_contig": "test_genome",
"source_pos": 100108,
"mapq": 60,
"seq": "CGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATGGACATAGAAGCAATTAGAAAAGTAACCGACCACATTTTGCTGTT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 90): 0)"
]
},
{
"qname": "test_genome-hap114497",
"source_contig": "test_genome",
"source_pos": 99761,
"mapq": 60,
"seq": "GTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGTCAAACCAACATACTGACCTGACCACGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -239): 0)"
]
},
{
"qname": "test_genome-hap13791",
"source_contig": "test_genome",
"source_pos": 99677,
"mapq": 60,
"seq": "GTGGTTTGGTGACACTCTTTCTGGCCATGTAGAGTTCTGGACACAAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -323): 0)"
]
},
{
"qname": "test_genome-hap13791",
"source_contig": "test_genome",
"source_pos": 99987,
"mapq": 60,
"seq": "ACAAAAGTAACCGACCACATTTTGCTGTTTTTTGGTCCTCAAGGTCTTTGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTGGCCTCGATACACAAACATCCTTGACGTCCTCGGTATCTGTATCTGTATCTGGCGCTATCTTCAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -31): 12)"
]
},
{
"qname": "test_genome-hap217905",
"source_contig": "test_genome",
"source_pos": 99549,
"mapq": 60,
"seq": "CACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGTGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTGACACTCTTTCT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -451): 1)"
]
},
{
"qname": "test_genome-hap217905",
"source_contig": "test_genome",
"source_pos": 99955,
"mapq": 60,
"seq": "CTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGACGCTATCTTCACGACCCGACTTGTGGGCTTATGCTGGCGTGTTT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -45): 0)"
]
},
{
"qname": "test_genome-hap24793",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "AGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATAC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, -149): 0)",
"(WithinRepeat(Forward, 1): 0)"
]
},
{
"qname": "test_genome-hap24793",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 60,
"seq": "GCAATTAGAAAAGTAACCGACCACATTTTGCTGTTTTTTGGTCCTCAAGGTCTTCGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACTTCCTTGACGTCCGCGCTATCTGTATCTGTATCTGTATCTGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -25): 3)"
]
},
{
"qname": "test_genome-hap218649",
"source_contig": "test_genome",
"source_pos": 100458,
"mapq": 60,
"seq": "TAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 440): 0)"
]
},
{
"qname": "test_genome-hap218649",
"source_contig": "test_genome",
"source_pos": 100135,
"mapq": 60,
"seq": "CCAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 117): 1)"
]
},
{
"qname": "test_genome-hap218771",
"source_contig": "test_genome",
"source_pos": 100158,
"mapq": 60,
"seq": "TGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTGTCCTACAATACGATTGAGTATAA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 140): 0)"
]
},
{
"qname": "test_genome-hap218771",
"source_contig": "test_genome",
"source_pos": 100513,
"mapq": 60,
"seq": "CTATCATGGCAGGCGGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACTATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 495): 0)"
]
},
{
"qname": "test_genome-hap214121",
"source_contig": "test_genome",
"source_pos": 100281,
"mapq": 60,
"seq": "CGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTCATTGTAATTAAGGAAGATCGAGTAACGCATCCCCTTATACTCAATCGTATTGTAGGACACA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 263): 0)"
]
},
{
"qname": "test_genome-hap214121",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 60,
"seq": "AGATACAGATACAGATACAGATACCGAGGACGTCAAGGATGTTTGAGTATCGAGGCAAGCGCAAATACCTAGTGCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -23): 2)"
]
},
{
"qname": "test_genome-hap115913",
"source_contig": "test_genome",
"source_pos": 100206,
"mapq": 60,
"seq": "AAGGATAGGGCTTCATTGTAATTAAGGAAGATCGAGTAACGCATCCCCTTATACTCAATCGTATTGCAGGACACAGCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 188): 1)"
]
},
{
"qname": "test_genome-hap115913",
"source_contig": "test_genome",
"source_pos": 99803,
"mapq": 60,
"seq": "TATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGTCAAACCAACATACTGACCTGACCACGTAAACTCCACTTGCGCGTGGTACTGATTATTCGGGCAAATCCA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -197): 1)"
]
},
{
"qname": "test_genome-hap23313",
"source_contig": "test_genome",
"source_pos": 100106,
"mapq": 60,
"seq": "GAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATGGACATAGAAGCAATTAGAAAAGTAACCCACCACATTTTGCTGTTTT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 88): 1)"
]
},
{
"qname": "test_genome-hap23313",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "AGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -149): 0)",
"(WithinRepeat(Forward, 1): 0)"
]
},
{
"qname": "test_genome-hap25125",
"source_contig": "test_genome",
"source_pos": 100031,
"mapq": 60,
"seq": "CGGTCGTAAACACAGGATGCCCAAGAATGGACATAGAAGCAATTAGAAAAGTAACCGACCACATTTTGCTGTTTTTTGGTCCTCAAGGTCTTCGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 13): 0)"
]
},
{
"qname": "test_genome-hap25125",
"source_contig": "test_genome",
"source_pos": 100031,
"mapq": 0,
"seq": "ACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATAAAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 5): 1)"
]
},
{
"qname": "test_genome-hap2387",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "CTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 3): 0)"
]
},
{
"qname": "test_genome-hap2387",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "GATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 2): 0)"
]
},
{
"qname": "test_genome-hap29847",
"source_contig": "test_genome",
"source_pos": 99621,
"mapq": 60,
"seq": "AATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTGACACTCTTTCTGGCCATGTAGAGTTCTGGACACAAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -379): 0)"
]
},
{
"qname": "test_genome-hap29847",
"source_contig": "test_genome",
"source_pos": 99809,
"mapq": 60,
"seq": "GTTTACTGGATTTGCCCGAATAATCAGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -191): 0)"
]
},
{
"qname": "test_genome-hap29817",
"source_contig": "test_genome",
"source_pos": 99721,
"mapq": 60,
"seq": "AAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -279): 0)"
]
},
{
"qname": "test_genome-hap29817",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAACTGTATCTGTATCTGTACCTGTATCTGTATCTGTATCTGTATCT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -149): 2)",
"(WithinRepeat(Reverse, 1): 2)"
]
},
{
"qname": "test_genome-hap2379",
"source_contig": "test_genome",
"source_pos": 99784,
"mapq": 60,
"seq": "AGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATGGG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -216): 0)"
]
},
{
"qname": "test_genome-hap2379",
"source_contig": "test_genome",
"source_pos": 99451,
"mapq": 60,
"seq": "GCCACCAAATAGAATTGGCTTCATGAAGAAATGGATTCCGAGATACCAGCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGATGTTCCGTGGCCCATTGACCAGCTAAATTT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -549): 1)"
]
},
{
"qname": "test_genome-hap27499",
"source_contig": "test_genome",
"source_pos": 99874,
"mapq": 0,
"seq": "CTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCAGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 3): 1)"
]
},
{
"qname": "test_genome-hap27499",
"source_contig": "test_genome",
"source_pos": 99874,
"mapq": 60,
"seq": "CGCGCCCAGTCAAACCAACATACTGACCTGACCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCTACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACAGATA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -126): 1)"
]
},
{
"qname": "test_genome-hap2573",
"source_contig": "test_genome",
"source_pos": 100031,
"mapq": 60,
"seq": "GGATGTTTGTGTATCGAGGCAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 13): 1)"
]
},
{
"qname": "test_genome-hap2573",
"source_contig": "test_genome",
"source_pos": 100323,
"mapq": 60,
"seq": "CCGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGCACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTCATTGTAATTAAGGAAGATC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 305): 2)"
]
},
{
"qname": "test_genome-hap112677",
"source_contig": "test_genome",
"source_pos": 100056,
"mapq": 60,
"seq": "CAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTTGACTGAGATCAG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 38): 1)"
]
},
{
"qname": "test_genome-hap112677",
"source_contig": "test_genome",
"source_pos": 100347,
"mapq": 60,
"seq": "ACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 329): 1)"
]
},
{
"qname": "test_genome-hap212441",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "TATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 0): 0)"
]
},
{
"qname": "test_genome-hap212441",
"source_contig": "test_genome",
"source_pos": 99798,
"mapq": 60,
"seq": "TGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGTCACACCAACATACTGACCTGACCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -202): 1)"
]
},
{
"qname": "test_genome-hap15343",
"source_contig": "test_genome",
"source_pos": 100131,
"mapq": 60,
"seq": "GCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATGGACATAGAAGCAATTAGAAAA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 113): 0)"
]
},
{
"qname": "test_genome-hap15343",
"source_contig": "test_genome",
"source_pos": 99798,
"mapq": 60,
"seq": "TGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGGCTACGTAAGCTACACGCGCCCAGTCAAACCAACATACTGACCTGACCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -202): 1)"
]
},
{
"qname": "test_genome-hap27603",
"source_contig": "test_genome",
"source_pos": 99463,
"mapq": 60,
"seq": "AATTGGCTTCATGAAGAAATGGATTCCGAGATACCAGCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -537): 0)"
]
},
{
"qname": "test_genome-hap27603",
"source_contig": "test_genome",
"source_pos": 99833,
"mapq": 60,
"seq": "CGACTTGTGGGCTTATGCTGGCGTGTTTACTGGATTTGCCCGAATAATCAGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTTACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -167): 1)"
]
},
{
"qname": "test_genome-hap1233",
"source_contig": "test_genome",
"source_pos": 100152,
"mapq": 60,
"seq": "TCAATCGTATTGTAGGACACAGCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 134): 0)"
]
},
{
"qname": "test_genome-hap1233",
"source_contig": "test_genome",
"source_pos": 99985,
"mapq": 60,
"seq": "TCGTGAAGATAGCGTCAGATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGGCAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTAAGTTT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -33): 13)"
]
},
{
"qname": "test_genome-hap216519",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 5): 0)"
]
},
{
"qname": "test_genome-hap216519",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "CAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 0): 0)"
]
},
{
"qname": "test_genome-hap28969",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "CTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 3): 0)"
]
},
{
"qname": "test_genome-hap28969",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "ATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 3): 0)"
]
},
{
"qname": "test_genome-hap213681",
"source_contig": "test_genome",
"source_pos": 99481,
"mapq": 60,
"seq": "ATGGATTCCGAGATACCAGCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGATGCGGAAAATAAAGCATCAATCGTTGGC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -519): 1)"
]
},
{
"qname": "test_genome-hap213681",
"source_contig": "test_genome",
"source_pos": 99840,
"mapq": 60,
"seq": "CACGACCCGACTTGTGGGCTTATGCTGGCGTGTTTACTGGATTTGCCCGAATAATCAGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -160): 0)"
]
},
{
"qname": "test_genome-hap15927",
"source_contig": "test_genome",
"source_pos": 99739,
"mapq": 60,
"seq": "TTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCTTGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGTCAAAC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -261): 1)"
]
},
{
"qname": "test_genome-hap15927",
"source_contig": "test_genome",
"source_pos": 99959,
"mapq": 60,
"seq": "TTTTTGGTCCTCAAGGTCTTCGATCCATCTGCGCCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTTGACGTCCTCGGTATCTGTATCTGTATCTGACGCTATCTTCGCGACCCGACTTGTGGGCTTATGCTGGCGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -59): 28)"
]
},
{
"qname": "test_genome-hap17441",
"source_contig": "test_genome",
"source_pos": 100282,
"mapq": 60,
"seq": "GTGTCCTACAATACGATTGAGTATAAGGGGATGCGTTACTCGATCTTCCTTAATTACAATGAAGCCCTATCCTTTAAAAATCTAAGCGCCGAACCAGTCGAAACCAGGTCCTATATAGGCCCCTACAGAATAAAGGGAGTACTCAGACGG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 264): 0)"
]
},
{
"qname": "test_genome-hap17441",
"source_contig": "test_genome",
"source_pos": 100615,
"mapq": 60,
"seq": "GGAGATCTCTAAATGGAACCTAAGACTTTTCGGGCGGCAACAATACCTTCCATCGCCTACCCGTACCTGTGCATTGCTGATATGCTGGCAGCCGGATCTCATCTATCATGGCAGGCAGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 597): 5)"
]
},
{
"qname": "test_genome-hap1409",
"source_contig": "test_genome",
"source_pos": 100446,
"mapq": 60,
"seq": "AAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 428): 0)"
]
},
{
"qname": "test_genome-hap1409",
"source_contig": "test_genome",
"source_pos": 100153,
"mapq": 60,
"seq": "ATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTAGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTGTCCTACAATACGATTGAG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 135): 1)"
]
},
{
"qname": "test_genome-hap217269",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "CTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 3): 0)"
]
},
{
"qname": "test_genome-hap217269",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "TACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 4): 0)"
]
},
{
"qname": "test_genome-hap16795",
"source_contig": "test_genome",
"source_pos": 100536,
"mapq": 60,
"seq": "TTATGCTGGCAGCCGGATCTCATCTATCATGGCAGGCGGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACTATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 518): 0)"
]
},
{
"qname": "test_genome-hap16795",
"source_contig": "test_genome",
"source_pos": 100274,
"mapq": 60,
"seq": "GGCGGGCTGTGTCCTACAATACGATTGAGTATAAGGGGATGCGTTACTCGATCTTCCTTAATTACAATGAAGCCCTATCCTTTAAAAATCTAAGCGCCGAACCAGTCGAAACCAGGTCCTATATAGGCCCCTACAGAATAAAGGGAATAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 256): 1)"
]
},
{
"qname": "test_genome-hap219703",
"source_contig": "test_genome",
"source_pos": 99644,
"mapq": 60,
"seq": "CGTCCATGGGAGGTTGTTACATGACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCGGGAATACTCG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -356): 0)"
]
},
{
"qname": "test_genome-hap219703",
"source_contig": "test_genome",
"source_pos": 99291,
"mapq": 60,
"seq": "ATGGGGGGGCAAGGAGCGGGGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATCCTACCGCAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -712): 2)"
]
},
{
"qname": "test_genome-hap12415",
"source_contig": "test_genome",
"source_pos": 100590,
"mapq": 60,
"seq": "CTTTTCGGGCGGCGACAATACCTTCAATCGCCTACCCGTACCTGTGCATTGCTGTTATGCTGGCAGCCGGATCTCATCTATCATGGCAGGCGGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACTATGAAGCTAAAACGTCGGCAAATCG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 572): 0)"
]
},
{
"qname": "test_genome-hap12415",
"source_contig": "test_genome",
"source_pos": 100308,
"mapq": 60,
"seq": "GGGGATGCGTTACTCGATCTTCCTTAATTACAATGAAGCCCTATCCTTTAAAAATCTAAGCGCCGAACCAGTCGAAACCAGGTCCTATATAGGCCCCTACAGAATAAAGGGAGTACTCAGACGGTATGACCTGGCAGGACTTACTTAGGA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 290): 0)"
]
},
{
"qname": "test_genome-hap115623",
"source_contig": "test_genome",
"source_pos": 100138,
"mapq": 60,
"seq": "GGACACAGCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATGGACATAGAAGCAAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 120): 0)"
]
},
{
"qname": "test_genome-hap115623",
"source_contig": "test_genome",
"source_pos": 99829,
"mapq": 60,
"seq": "CTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGTCAAACCAACATACTGACCTGACCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -171): 0)"
]
},
{
"qname": "test_genome-hap12439",
"source_contig": "test_genome",
"source_pos": 100026,
"mapq": 60,
"seq": "ATCAAGGATGTTTGTGTATCGAGGCAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATTCTGTGTTTAC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 8): 2)"
]
},
{
"qname": "test_genome-hap12439",
"source_contig": "test_genome",
"source_pos": 100355,
"mapq": 60,
"seq": "CTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGAACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 337): 1)"
]
},
{
"qname": "test_genome-hap216007",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "TATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 0): 0)"
]
},
{
"qname": "test_genome-hap216007",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "TCAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -1): 0)"
]
},
{
"qname": "test_genome-hap214297",
"source_contig": "test_genome",
"source_pos": 100254,
"mapq": 60,
"seq": "CGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTCATTGTAATTAAGGAAGATCGAGTAACGCATCCCCTTATACTCAATCGTATTGTAGGACACTGCCCGCCGCGGTTTGAAGGCACGCGGA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 236): 2)"
]
},
{
"qname": "test_genome-hap214297",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 18,
"seq": "TACAGATACAGATACACATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACCGACGACGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -140): 2)"
]
},
{
"qname": "test_genome-hap219737",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "CTCGGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTACCTGTATCTGTATCTGTATCTGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -145): 1)"
]
},
{
"qname": "test_genome-hap219737",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "CAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATAGAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATATAGATACAGATACAGATACAGATACAGATACAGATA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 0): 2)"
]
},
{
"qname": "test_genome-hap116631",
"source_contig": "test_genome",
"source_pos": 99694,
"mapq": 60,
"seq": "TTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATGGGAGGTTGTTACATGACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -306): 0)"
]
},
{
"qname": "test_genome-hap116631",
"source_contig": "test_genome",
"source_pos": 99405,
"mapq": 60,
"seq": "GTACCCGATTACGTTCGTGATATCCTACCGCATTATGTATGCTTACGCCAACAAATACAATTGGCTTCATGAAGAAATGGATTCCGAGATACCAGCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -595): 2)"
]
},
{
"qname": "test_genome-hap17853",
"source_contig": "test_genome",
"source_pos": 100292,
"mapq": 60,
"seq": "CCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTCATTGTAATTAAGGAAGATCGAGTAACGCATCCCCTTATACTCAATCGTAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 274): 0)"
]
},
{
"qname": "test_genome-hap17853",
"source_contig": "test_genome",
"source_pos": 99924,
"mapq": 60,
"seq": "TCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGGCAAGCGCAAATACCTAGTCCTGGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -76): 37)"
]
},
{
"qname": "test_genome-hap217071",
"source_contig": "test_genome",
"source_pos": 99653,
"mapq": 60,
"seq": "TATCAAAAGCGTCCATGGGAGGTTGTTACATGACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCGG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -347): 0)"
]
},
{
"qname": "test_genome-hap217071",
"source_contig": "test_genome",
"source_pos": 99279,
"mapq": 60,
"seq": "AACACAAGAGTCGGGGGGCAAGGAGCGGGGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -721): 0)"
]
},
{
"qname": "test_genome-hap210721",
"source_contig": "test_genome",
"source_pos": 99810,
"mapq": 60,
"seq": "ATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGTCAAACCAACATACTGACCTGACCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -190): 0)"
]
},
{
"qname": "test_genome-hap210721",
"source_contig": "test_genome",
"source_pos": 99810,
"mapq": 0,
"seq": "ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATTTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTTTCTGTATCCGTATCTGTATCTGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Reverse, 5): 3)"
]
},
{
"qname": "test_genome-hap14627",
"source_contig": "test_genome",
"source_pos": 99776,
"mapq": 60,
"seq": "GAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTAAAGGATCAAGATATATCAAAAGCGTCCATGGGAGGTTGTT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -224): 0)"
]
},
{
"qname": "test_genome-hap14627",
"source_contig": "test_genome",
"source_pos": 99429,
"mapq": 60,
"seq": "CTACCGCATTATGTATGCTTACGCCACCAAATAGAATTGGCTTCATGAAGAAATGGATTCCGAGATACCAGCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -571): 0)"
]
},
{
"qname": "test_genome-hap28725",
"source_contig": "test_genome",
"source_pos": 99874,
"mapq": 60,
"seq": "CGCGCCCAGTCAAACCAACATACTGACCTGACCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACAGATA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -126): 0)"
]
},
{
"qname": "test_genome-hap28725",
"source_contig": "test_genome",
"source_pos": 99874,
"mapq": 0,
"seq": "ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCCGTATCTGTATCTGTATCTGTATCTGTATCTGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Reverse, 5): 1)"
]
},
{
"qname": "test_genome-hap17165",
"source_contig": "test_genome",
"source_pos": 99761,
"mapq": 60,
"seq": "GTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGTTCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGTCAAACCAACATACTGACCTGACCACGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -239): 1)"
]
},
{
"qname": "test_genome-hap17165",
"source_contig": "test_genome",
"source_pos": 100161,
"mapq": 60,
"seq": "CCCTTATACTCAATCGTATTGTAGGACACAGCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 143): 0)"
]
},
{
"qname": "test_genome-hap26727",
"source_contig": "test_genome",
"source_pos": 99913,
"mapq": 60,
"seq": "ACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -87): 0)"
]
},
{
"qname": "test_genome-hap26727",
"source_contig": "test_genome",
"source_pos": 99913,
"mapq": 0,
"seq": "GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTGTCTGTATCT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -149): 1)",
"(WithinRepeat(Reverse, 1): 1)"
]
},
{
"qname": "test_genome-hap215609",
"source_contig": "test_genome",
"source_pos": 100395,
"mapq": 60,
"seq": "CTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 377): 0)"
]
},
{
"qname": "test_genome-hap215609",
"source_contig": "test_genome",
"source_pos": 100108,
"mapq": 60,
"seq": "AACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 90): 0)"
]
},
{
"qname": "test_genome-hap218225",
"source_contig": "test_genome",
"source_pos": 99930,
"mapq": 60,
"seq": "TGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGACGCTATCTTCAAGACCCGACTTGTGGGCTTATGCTGGCGTGTTTACTGGAATTGCCCGAATAATCAGTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -70): 2)"
]
},
{
"qname": "test_genome-hap218225",
"source_contig": "test_genome",
"source_pos": 99746,
"mapq": 60,
"seq": "TTTAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATGCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCTAGTCAAACCAACCTA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -254): 4)"
]
},
{
"qname": "test_genome-hap119363",
"source_contig": "test_genome",
"source_pos": 99703,
"mapq": 60,
"seq": "ATGTAGAGTTCTGGACACAAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCATGTAACAACCTCCCATCGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -297): 1)"
]
},
{
"qname": "test_genome-hap119363",
"source_contig": "test_genome",
"source_pos": 99989,
"mapq": 60,
"seq": "TTAGAAAAGTAACCGACCACATTTTGCTGTTTTTTGGTCCTCAAGGTCTTCGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTTGACGTCCTCGGTATCTGTATCTGTATCTGACGCTATCTTC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -29): 7)"
]
},
{
"qname": "test_genome-hap119577",
"source_contig": "test_genome",
"source_pos": 99915,
"mapq": 60,
"seq": "TCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGGCAAGCGCAAATACCT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -85): 30)"
]
},
{
"qname": "test_genome-hap119577",
"source_contig": "test_genome",
"source_pos": 100186,
"mapq": 60,
"seq": "AATAAGGAAGATCGAGTAACGCATCCCCTTATACTCAATCGTATTGTAGGACACAGCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAAAACATAATCGTCAACTGATCTCAGTCGACTTAGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 168): 2)"
]
},
{
"qname": "test_genome-hap17407",
"source_contig": "test_genome",
"source_pos": 100425,
"mapq": 60,
"seq": "CTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAATAAGTCCTGCCAGGTCATACCGTCTG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 407): 1)"
]
},
{
"qname": "test_genome-hap17407",
"source_contig": "test_genome",
"source_pos": 100111,
"mapq": 60,
"seq": "AGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 93): 0)"
]
},
{
"qname": "test_genome-hap22849",
"source_contig": "test_genome",
"source_pos": 100259,
"mapq": 60,
"seq": "TGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTCATTGTAATTAAGGAAGATCGAGTAACGCATCCCCTTATACTCAATCGTATTGTAGGACACAGCCCGCCGCGGTTTGAAGGCAC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 241): 0)"
]
},
{
"qname": "test_genome-hap22849",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 60,
"seq": "CAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGGAAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAACACCT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, -72): 2)"
]
},
{
"qname": "test_genome-hap28325",
"source_contig": "test_genome",
"source_pos": 99203,
"mapq": 60,
"seq": "CATCTACAGCAACCTACTTGTATACCAAGCAGGTGTACCGGCCCCTGGAGACGTTGAGAGCTATGCACCTGCGACGAACACAAGAGTCGGGGGGCAAGGAGCGGGGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -797): 0)"
]
},
{
"qname": "test_genome-hap28325",
"source_contig": "test_genome",
"source_pos": 99561,
"mapq": 60,
"seq": "CTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCGGGAATACTCGCTAGTGGCCCCATGCCAACGATTGATGCTTTATTTTCCGCAGCAAATTTAGCTGGTCAATGGGCCACGGAACGTCAGTCCTAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -439): 0)"
]
},
{
"qname": "test_genome-hap114323",
"source_contig": "test_genome",
"source_pos": 100090,
"mapq": 60,
"seq": "AGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 72): 0)"
]
},
{
"qname": "test_genome-hap114323",
"source_contig": "test_genome",
"source_pos": 100394,
"mapq": 60,
"seq": "TGAAGCGTCGCATGGTGTGAATGTTCAATTGGTATTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 376): 2)"
]
},
{
"qname": "test_genome-hap24513",
"source_contig": "test_genome",
"source_pos": 99560,
"mapq": 60,
"seq": "CATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTGACACTCTTTCTGGCCATGTAGA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -440): 0)"
]
},
{
"qname": "test_genome-hap24513",
"source_contig": "test_genome",
"source_pos": 99828,
"mapq": 60,
"seq": "TGTGGGCTTATGCTGGCGTGTTTACTGGATTTGCCCGAATAATCAGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGCCTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -172): 1)"
]
},
{
"qname": "test_genome-hap22261",
"source_contig": "test_genome",
"source_pos": 100100,
"mapq": 60,
"seq": "GACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 82): 0)"
]
},
{
"qname": "test_genome-hap22261",
"source_contig": "test_genome",
"source_pos": 100455,
"mapq": 60,
"seq": "AACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACATGAGGAGGATGGCGTCC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 437): 2)"
]
},
{
"qname": "test_genome-hap219763",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "ACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGAT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Forward, 5): 0)"
]
},
{
"qname": "test_genome-hap219763",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "GTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -149): 0)",
"(WithinRepeat(Reverse, 1): 0)"
]
},
{
"qname": "test_genome-hap18469",
"source_contig": "test_genome",
"source_pos": 100287,
"mapq": 60,
"seq": "GCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCTTCATTGTAATTAAGGAAGATCGAGTAACGCATCCCCTTATACTCAATCGTATTGTAG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 269): 1)"
]
},
{
"qname": "test_genome-hap18469",
"source_contig": "test_genome",
"source_pos": 100082,
"mapq": 60,
"seq": "TGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 64): 0)"
]
},
{
"qname": "test_genome-hap14335",
"source_contig": "test_genome",
"source_pos": 99816,
"mapq": 60,
"seq": "CTGGCGTGTTTACTGGATTTGCCCGAATAATCAGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGGGGGTACATAATTTTGGGCATGCTAAAGGATCAGTCTCGTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -184): 0)"
]
},
{
"qname": "test_genome-hap14335",
"source_contig": "test_genome",
"source_pos": 99479,
"mapq": 60,
"seq": "AAATGGATTCCGAGATACCAGCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCAATAGGACTCACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGATG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -521): 3)"
]
},
{
"qname": "test_genome-hap28533",
"source_contig": "test_genome",
"source_pos": 100039,
"mapq": 60,
"seq": "GTGTATCGAGGCAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, 21): 0)"
]
},
{
"qname": "test_genome-hap28533",
"source_contig": "test_genome",
"source_pos": 100344,
"mapq": 60,
"seq": "AAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAGGATAGGGCT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 326): 0)"
]
},
{
"qname": "test_genome-hap27199",
"source_contig": "test_genome",
"source_pos": 99984,
"mapq": 60,
"seq": "GTCGTGAAGATAGCGTCAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGCTACAGATACA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -16): 1)"
]
},
{
"qname": "test_genome-hap27199",
"source_contig": "test_genome",
"source_pos": 99984,
"mapq": 0,
"seq": "ATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Reverse, 5): 0)"
]
},
{
"qname": "test_genome-hap2123",
"source_contig": "test_genome",
"source_pos": 99323,
"mapq": 60,
"seq": "AGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATCCTACCGCATTATGTATGCTTACGCCACCAAATAGAATTGGCTTC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -677): 0)"
]
},
{
"qname": "test_genome-hap2123",
"source_contig": "test_genome",
"source_pos": 99657,
"mapq": 60,
"seq": "GATATATCAAAAGCGTCCATGGGAGGTTGTTACATGACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -343): 0)"
]
},
{
"qname": "test_genome-hap13111",
"source_contig": "test_genome",
"source_pos": 99659,
"mapq": 60,
"seq": "AAGATATATCAAAAGCGTCCATGGGAGGTTGTTACATGACGTCACAACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTCTTCAG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -341): 1)"
]
},
{
"qname": "test_genome-hap13111",
"source_contig": "test_genome",
"source_pos": 99333,
"mapq": 60,
"seq": "GTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCCGATTACGTTCGTGATATCCTACCGCATTATGTATGCTTACGCCACCAAATAGAATTGGCTTCATGAAGAAAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -667): 0)"
]
},
{
"qname": "test_genome-hap119525",
"source_contig": "test_genome",
"source_pos": 99499,
"mapq": 60,
"seq": "GCGACACTTCACTGAATGGATCACCGGGAATCTCATCTCATGGAGTCTCTCACTACTTCGCCATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGGGGCCACTAGCGAGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -501): 0)"
]
},
{
"qname": "test_genome-hap119525",
"source_contig": "test_genome",
"source_pos": 99879,
"mapq": 60,
"seq": "GACGTCCTCGGTATCTGTATCTGTATCTGACGCTATCTTCACGACCCGACTTGTGGGCTTATGCTGGCGTGTTTACTGGATTTGCCCGAATAATCAGTACCACGAGCAAGTGGAGTTTACATGGTCAGGTCAGTATGTTGGTTTGACTGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -121): 8)"
]
},
{
"qname": "test_genome-hap19251",
"source_contig": "test_genome",
"source_pos": 99778,
"mapq": 60,
"seq": "CAACCTCCCATGGACGCTTTTGATATATCTTGATCCTTTACGAGACTGATCCTTTAGCATGCCCAAAATTATGTACCCCCGTCTACGTAAGCTACACGCGCCCAGTCAAACCAACATACTGACCTGACCACGTAAACTCCACTTGCTCGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -222): 0)"
]
},
{
"qname": "test_genome-hap19251",
"source_contig": "test_genome",
"source_pos": 100092,
"mapq": 60,
"seq": "TCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATGGACATAGAAGCAATTAGAAAAGTAACCGACCACATTTTGCTGTTTTTTGGTCCTCAAGGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 74): 0)"
]
},
{
"qname": "test_genome-hap22223",
"source_contig": "test_genome",
"source_pos": 99567,
"mapq": 60,
"seq": "CCAGAACTCTACATGGCCAGAAAGAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCGGGAATACTCGCTAGTGGCCCCATGCCAACGATTGATGCTTTATTTTCCGCAGCAAATTTAGCTGGTCAATGGGCCACGGAACGTCAG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -433): 0)"
]
},
{
"qname": "test_genome-hap22223",
"source_contig": "test_genome",
"source_pos": 99227,
"mapq": 60,
"seq": "CCAAGCAGGTGTACCGGCCCCTGGAGACGTTGAGAGCTATGCACCTGCGACGAACACAAGAGTCGGGGGGCCAGGAGCGGGGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -773): 1)"
]
},
{
"qname": "test_genome-hap17933",
"source_contig": "test_genome",
"source_pos": 99988,
"mapq": 60,
"seq": "TGAAGATAGCGTCAGATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGGCAAGCGCAAATACCTAGTCCTGGGGACGCAGATGGATCGAAGACCTTGAGGACCAAAAAACAGCAAAATGTGGTCGGTTACTTTTCTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Forward, -30): 8)"
]
},
{
"qname": "test_genome-hap17933",
"source_contig": "test_genome",
"source_pos": 100312,
"mapq": 60,
"seq": "GTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGATTCGGCGCTTAGATTTTTAAACGATAGGGCTTCATTGTAATTAAGGAAGATCGAGTAACGCAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 294): 2)"
]
},
{
"qname": "test_genome-hap1635",
"source_contig": "test_genome",
"source_pos": 100353,
"mapq": 60,
"seq": "CAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTGGTTTCGACTGGTTCGGCGCTTAGATTTTTAAAG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 335): 0)"
]
},
{
"qname": "test_genome-hap1635",
"source_contig": "test_genome",
"source_pos": 100129,
"mapq": 60,
"seq": "ACTTTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 111): 0)"
]
},
{
"qname": "test_genome-hap116647",
"source_contig": "test_genome",
"source_pos": 100176,
"mapq": 60,
"seq": "ATCGAGTAACGCATCCCCTTATACTCAATCGTATTGTAGGACACAGCCCGCCGCGGTTTGAAGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 158): 0)"
]
},
{
"qname": "test_genome-hap116647",
"source_contig": "test_genome",
"source_pos": 99900,
"mapq": 60,
"seq": "CCTGACCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGATACCGAGGACGTCAAGGATGTTTGTGTATCGAGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -100): 21)"
]
},
{
"qname": "test_genome-hap16233",
"source_contig": "test_genome",
"source_pos": 99560,
"mapq": 60,
"seq": "CATAGGACTGACGTTCCGTGGCCCATTGACCAGCTAAATTTGCTGCGGAAAATAAAGCATCAATCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTGACACTCTTTCTGGCCATGTAGA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -440): 0)"
]
},
{
"qname": "test_genome-hap16233",
"source_contig": "test_genome",
"source_pos": 99834,
"mapq": 60,
"seq": "CCGACTTGTGGGCTTATGCTGGCGTGTTTACTGGATTTGCCCGAATAATCAGTACCACGAGCAAGTGGAGTTTACGTGGTCAGGTCAGTATGTTGGTTTGACTGGGCGCGTGTAGCTTACGTAGACGTGGGTACATAATTTTCGGCATGC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -166): 2)"
]
},
{
"qname": "test_genome-hap112557",
"source_contig": "test_genome",
"source_pos": 100538,
"mapq": 60,
"seq": "TGTTATGCTGGCAGCCGGATCTCATCTATCATGGCAGGCGGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACTATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 520): 0)"
]
},
{
"qname": "test_genome-hap112557",
"source_contig": "test_genome",
"source_pos": 100292,
"mapq": 60,
"seq": "ATACGATTGAGTATAAGGGGATGCGTTACTCGATCTTCCTTAATTACAATGAAGCCCTATCCTTTAAAAATCTAAGCGCCGAACCAGTCGAAACCAGGTCCTATATAGGCCCCTACAGAATAAAGGGAGTACTCAGACGGTATGACCTGG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 274): 0)"
]
},
{
"qname": "test_genome-hap218683",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 60,
"seq": "TCGATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTTGACGTCCTCGGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, -78): 0)"
]
},
{
"qname": "test_genome-hap218683",
"source_contig": "test_genome",
"source_pos": 100000,
"mapq": 0,
"seq": "ATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGCTACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 3): 1)"
]
},
{
"qname": "test_genome-hap119721",
"source_contig": "test_genome",
"source_pos": 100516,
"mapq": 60,
"seq": "CATCTATCATGGCAGGCGGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACTATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTAAACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 498): 0)"
]
},
{
"qname": "test_genome-hap119721",
"source_contig": "test_genome",
"source_pos": 100154,
"mapq": 60,
"seq": "TGCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCTGTGTCCTACAATACGATTGAGT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 136): 1)"
]
},
{
"qname": "test_genome-hap29189",
"source_contig": "test_genome",
"source_pos": 99867,
"mapq": 0,
"seq": "TCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 4): 0)"
]
},
{
"qname": "test_genome-hap29189",
"source_contig": "test_genome",
"source_pos": 99867,
"mapq": 60,
"seq": "GGCTACACGCGCCCAGTCAAACCAACATACTGACCTGACCACGTAAACTCCACTTGCTCGTGGTACTGATTATTCGGGCAAATCCAGTAAACACGCCAGCATAAGCCCACAAGTCGGGTCGTGAAGATAGCGTCAGATACAGATACAGAT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -133): 1)"
]
},
{
"qname": "test_genome-hap119689",
"source_contig": "test_genome",
"source_pos": 100511,
"mapq": 60,
"seq": "ATCATGGCAGGCGGTCCCTCGATCCTTTGTCTTAGCCCGAAGCACTATGAAGCTAAAACGTCGGCAAATCGGTTACTTACACAGGTCTCGGACCTATACGTATAAACATACGGTGTCTGAAGCGTCGCAAGGTGTGAATGTTCAATTGGT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 493): 1)"
]
},
{
"qname": "test_genome-hap119689",
"source_contig": "test_genome",
"source_pos": 100189,
"mapq": 60,
"seq": "AAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGCCGGAGCCTGAGTCACCTGTTGTTCCACGTGCCTTCAAACCGCGGCGGGCTGTGTCCTACAATACGATTGAGTATAAGGGGACGCGTTACTCGATCTTCCTTAATTAC",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 171): 2)"
]
},
{
"qname": "test_genome-hap113643",
"source_contig": "test_genome",
"source_pos": 99261,
"mapq": 60,
"seq": "AGCTATGCACCTGCGACGAACACAAGAGTCGGGGGGCAAGGAGCGGGGAATCTGGATTAGAAAGGATGAGCCGTCGACAAACTGCGGGCTGCCTCCTACTGACTGGATCGTTGTAGAAAAACCGTCATGCTTTAACCGTATCGTGTACCC",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Forward, -739): 0)"
]
},
{
"qname": "test_genome-hap113643",
"source_contig": "test_genome",
"source_pos": 99614,
"mapq": 60,
"seq": "AACAGAACGGACCCTGAAACACCAATCCTTGGGCACAATCTTTGTGTCCAGAACTCTACATGGCCAGAAAAAGTGTCACCAAACCACTTGGTACTGCCTGTTCAGTCTCGGGAATACTCGCTAGTGGCCCCATGCCAACGATTGATGCTT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Reverse, -386): 1)"
]
},
{
"qname": "test_genome-hap112429",
"source_contig": "test_genome",
"source_pos": 99937,
"mapq": 60,
"seq": "ATCCATCTGCGTCCCCAGGACTAGGTATTTGCGCTTGCCTCGATACACAAACATCCTTGACGTACTCGGTATCTGTATCTGTATCTGACGCTATCTTCACGACCCGACTTGTGGGCTTATGCTGGCGTGTTTACTGGATTTGCCCGAATA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatStart(Reverse, -63): 42)"
]
},
{
"qname": "test_genome-hap112429",
"source_contig": "test_genome",
"source_pos": 99623,
"mapq": 60,
"seq": "TCGTTGGCATGGGGCCACTAGCGAGTATTCCCGAGACTGAACAGGCAGTACCAAGTGGTTTGGTTACACTCTTTCTGGCCATGTAGAGTTCTGGACACAAAGATTGTGCCCAAGGATTGGTGTTTCAGGGTCCGTTCTGTTGTGACGTCA",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatStart(Forward, -377): 1)"
]
},
{
"qname": "test_genome-hap110881",
"source_contig": "test_genome",
"source_pos": 100386,
"mapq": 60,
"seq": "CGCAAGGTGTGAATGTTCAATTGGTAGTAGTCTCAGTACACTAAGCTGCGTAAGTAGACCTACCTGAGGAGGATGTCGTCCTAAGTAAGTCCTGCCAGGTCATACCGTCTGAGTACTCCCTTTATTCTGTAGGGGCCTATATAGGACCTG",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 368): 0)"
]
},
{
"qname": "test_genome-hap110881",
"source_contig": "test_genome",
"source_pos": 100132,
"mapq": 60,
"seq": "TTTCTAATTGCTTCTATGTCCATTCTTGGGCATCCTGTGTTTACGACCGAAACAACTAAGTCGACTGAGATCAGTTGACGATTATGTTCTACTGATGGGACGGAGCCTGAGTCACCTGTTGTTCCGCGTGCCTTCAAACCGCGGCGGGCT",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(RelativeToRepeatEnd(Forward, 114): 1)"
]
},
{
"qname": "test_genome-hap24569",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "TCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTATCTGTA",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(WithinRepeat(Reverse, 4): 0)"
]
},
{
"qname": "test_genome-hap24569",
"source_contig": "*",
"source_pos": -1,
"mapq": 0,
"seq": "ATACAGATACAGATACAGATACAGATAAAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATCCAGATACAGATACAGATACAGATACAGATACAGATACAGATACAGATACAG",
"seq_len": 150,
"is_first_in_template": false,
"position_set": [
"(WithinRepeat(Forward, 3): 2)"
]
},
{
"qname": "test_genome-hap19111",
"source_contig": "test_genome",
"source_pos": 100115,
"mapq": 60,
"seq": "AGGCACGCGGAACAACAGGTGACTCAGGCTCCGGCCCATCAGTAGAACATAATCGTCAACTGATCTCAGTCGACTTAGTTGTTTCGGTCGTAAACACAGGATGCCCAAGAATGGACATAGAAGCAATTAGAAAAGTAACCGACCACATTT",
"seq_len": 150,
"is_first_in_template": true,
"position_set": [
"(RelativeToRepeatEnd(Reverse, 97): 0)"
]
},
{
"qname": "test_genome-hap19111",
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