sbol-db-server 0.1.7

//! SynBioHub v1 wire-compatibility adapter.
//!
//! This module is the quarantine layer for classic SynBioHub's HTTP quirks:
//! the `X-authorization` token header, the Accept-negotiated login response,
//! the form-encoded request bodies. Every route here talks only to the
//! [`AppServices`](sbol_db_app::AppServices) facade through `state.app`; none
//! reach into a concrete backend. Containing the quirks here lets the idiomatic
//! V2 surface evolve without inheriting them.

mod admin;
mod attachments;
mod auth;
mod download;
mod edit;
mod jobs;
mod mutate;
mod permission;
mod plugins;
mod queries;
mod render;
mod routes;
mod search;
mod sequence;
mod setup;
mod share;
mod submit;
mod support;

use axum::extract::{Request, State};
use axum::middleware::Next;
use axum::response::Response;
use axum::routing::{get, post};
use axum::Router;
use sbol_db_core::User;

use crate::{metrics, AppState};

/// The account a request authenticates as, resolved from the `X-authorization`
/// token by [`attach_current_user`] and read by the V1 routes through an
/// `Extension<CurrentUser>`. Anonymous (`None`) when no valid token is present.
#[derive(Clone, Debug, Default)]
pub struct CurrentUser(pub Option<User>);

/// The V1 SynBioHub-compatible auth routes, with the `X-authorization`
/// middleware applied so every route observes a resolved [`CurrentUser`]. The
/// Basic-auth `/sparql-auth*` path is unrelated and stays in [`crate::auth`]
/// for Virtuoso-protocol clients.
pub fn router(state: AppState) -> Router<AppState> {
    let public = Router::new()
        .route("/login", post(auth::login))
        .route("/logout", post(auth::logout))
        .route("/register", post(auth::register))
        .route(
            "/profile",
            get(auth::get_profile).post(auth::update_profile),
        )
        .route("/resetPassword", post(auth::reset_password))
        .route("/setNewPassword", post(auth::set_new_password))
        // First-launch setup: provision the first administrator + branding. The
        // UI shows its setup wizard when /admin/theme reports firstLaunch.
        .route("/setup", get(setup::get_setup).post(setup::post_setup))
        // The public Web of Registries update callback. Not admin-gated; it is
        // authenticated by the shared update secret, matching classic.
        .route(
            "/updateWebOfRegistries",
            post(admin::update_web_of_registries),
        )
        // Plugin proxying and the temp-file / async-stream handoffs. Public
        // (authenticated, not admin-gated), matching classic's
        // `requirePublicLogin` mount.
        .route("/callPlugin", post(plugins::call_plugin))
        .route("/expose/:id", get(plugins::serve_expose))
        .route(
            "/stream/:id",
            get(plugins::serve_stream).delete(plugins::clear_stream),
        )
        // Admin resources classic serves to anonymous callers so the UI can
        // render: theme/plugins/registries GET are public; the theme POST
        // self-authorizes (ConfigService rejects a non-admin with 403).
        .route("/admin/theme", get(admin::get_theme).post(admin::set_theme))
        .route("/admin/plugins", get(admin::plugins))
        .route("/admin/registries", get(admin::registries))
        // Jobs: the cancel/restart actions (the caller's `/jobs` list is served
        // by the native server router).
        .route("/actions/job/cancel", post(jobs::cancel_job))
        .route("/actions/job/restart", post(jobs::restart_job))
        .route("/corruptLog", get(jobs::corrupt_log))
        // UI-support data APIs (autocomplete, DataTables feed, result stream,
        // sequence-search entry point).
        .route("/autocomplete/:query", get(support::autocomplete))
        .route("/api/datatables", get(support::datatables))
        .route(
            "/api/stream/:id",
            get(support::stream).delete(support::stream),
        )
        .route(
            "/sbsearch",
            get(support::sbsearch_get).post(support::sbsearch_post),
        )
        // Share links: mint a share hash for an object, and the hash-scoped
        // read surface that serves the (possibly private) object without login.
        .route(
            "/user/:userId/:collectionId/:displayId/:version/shareLink",
            get(share::share_link),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share",
            get(share::share_bare),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/full",
            get(share::share_full),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/sbol",
            get(share::share_sbol),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/sbolnr",
            get(share::share_sbolnr),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/gb",
            get(share::share_genbank),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/fasta",
            get(share::share_fasta),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/gff",
            get(share::share_gff),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/omex",
            get(share::share_omex),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/summary",
            get(share::share_summary),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/metadata",
            get(share::share_metadata),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/subCollections",
            get(share::share_sub_collections),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/uses",
            get(share::share_uses),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/usesCount",
            get(share::share_uses_count),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/twins",
            get(share::share_twins),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/:hash/share/twinsCount",
            get(share::share_twins_count),
        )
        // Remote federation client. The remoteLogin/Search/Submit routes are
        // classic's deprecated no-HTML aliases for login/search/submit;
        // copyFromRemote imports an object from the registry that owns it.
        .route("/remoteLogin", post(auth::login))
        .route("/remoteSearch", get(routes::search_root))
        .route("/remoteSearch/*query", get(routes::search))
        .route("/remoteSubmit", post(submit::submit))
        .route("/remoteSubmit/", post(submit::submit))
        .route(
            "/public/:collectionId/:displayId/:version/copyFromRemote",
            get(support::public_copy_from_remote).post(support::public_copy_from_remote),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/copyFromRemote",
            get(support::user_copy_from_remote).post(support::user_copy_from_remote),
        )
        // Classic's /browse is the root-collections listing the UI browses; it
        // returns each collection with the route `url` and `public` flag that
        // /rootCollections omits.
        .route("/browse", get(routes::browse))
        .route("/submit", post(submit::submit))
        // Classic registers `/submit/` (trailing slash); Express matches both,
        // so accept both to stay a drop-in for clients built against either.
        .route("/submit/", post(submit::submit))
        // Bare object resolution (classic's `views.topLevel`): a GET on the
        // object URI, its `/full` alias, and the version-less persistent identity
        // all return the object's recursive SBOL closure for a non-HTML client. A
        // version-less URI resolves to the latest version.
        .route(
            "/public/:collectionId/:displayId/:version",
            get(download::public_object),
        )
        .route(
            "/public/:collectionId/:displayId/:version/full",
            get(download::public_object_full),
        )
        .route(
            "/public/:collectionId/:displayId",
            get(download::public_object_pi),
        )
        .route(
            "/public/:collectionId/:displayId/sbol",
            get(download::public_sbol_pi),
        )
        .route(
            "/public/:collectionId/:displayId/sbolnr",
            get(download::public_sbolnr_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version",
            get(download::user_object),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/full",
            get(download::user_object_full),
        )
        .route(
            "/user/:userId/:collectionId/:displayId",
            get(download::user_object_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/sbol",
            get(download::user_sbol_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/sbolnr",
            get(download::user_sbolnr_pi),
        )
        // Destructive object verbs. Classic triggers these with GET on the
        // object path (a browser-form quirk); the facade holds the real verbs
        // and gates every one on caller ownership.
        .route(
            "/user/:userId/:collectionId/:displayId/:version/makePublic",
            post(mutate::user_make_public),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/remove",
            get(mutate::user_remove).post(mutate::user_remove),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/replace",
            get(mutate::user_replace).post(mutate::user_replace),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/removeCollection",
            get(mutate::user_remove_collection).post(mutate::user_remove_collection),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/icon",
            post(mutate::user_icon),
        )
        .route(
            "/public/:collectionId/:displayId/:version/remove",
            get(mutate::public_remove).post(mutate::public_remove),
        )
        .route(
            "/public/:collectionId/:displayId/:version/replace",
            get(mutate::public_replace).post(mutate::public_replace),
        )
        .route(
            "/public/:collectionId/:displayId/:version/removeCollection",
            get(mutate::public_remove_collection).post(mutate::public_remove_collection),
        )
        .route(
            "/public/:collectionId/:displayId/:version/icon",
            post(mutate::public_icon),
        )
        // Field-edit surface. The mutable text fields and citations take the
        // target uri in the body; the generic edit/add/remove of a field and the
        // membership verbs take it in the path. Every one is owner-gated and
        // refreshes dcterms:modified.
        .route(
            "/updateMutableDescription",
            post(edit::update_mutable_description),
        )
        .route("/updateMutableNotes", post(edit::update_mutable_notes))
        .route("/updateMutableSource", post(edit::update_mutable_source))
        .route("/updateCitations", post(edit::update_citations))
        .route(
            "/user/:userId/:collectionId/:displayId/:version/edit/:field",
            post(edit::user_edit_field),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/add/:field",
            post(edit::user_add_field),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/remove/:field",
            post(edit::user_remove_field),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/addToCollection",
            post(edit::user_add_to_collection),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/removeMembership",
            post(edit::user_remove_membership),
        )
        .route(
            "/public/:collectionId/:displayId/:version/edit/:field",
            post(edit::public_edit_field),
        )
        .route(
            "/public/:collectionId/:displayId/:version/add/:field",
            post(edit::public_add_field),
        )
        .route(
            "/public/:collectionId/:displayId/:version/remove/:field",
            post(edit::public_remove_field),
        )
        .route(
            "/public/:collectionId/:displayId/:version/addToCollection",
            post(edit::public_add_to_collection),
        )
        .route(
            "/public/:collectionId/:displayId/:version/removeMembership",
            post(edit::public_remove_membership),
        )
        // Object-sharing (permission) surface: grant and revoke another user's
        // view access. Owner-gated through the facade.
        .route(
            "/user/:userId/:collectionId/:displayId/:version/addOwner",
            post(permission::user_add_owner),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/removeOwner/:username",
            get(permission::user_remove_owner).post(permission::user_remove_owner),
        )
        .route(
            "/public/:collectionId/:displayId/:version/addOwner",
            post(permission::public_add_owner),
        )
        .route(
            "/public/:collectionId/:displayId/:version/removeOwner/:username",
            get(permission::public_remove_owner).post(permission::public_remove_owner),
        )
        // Read/query surface. Free-text relevance runs over the ranked index;
        // facets, counts, members, uses, twins, and metadata are SPARQL over
        // the shared engine, all under the caller's authorized graph scope.
        .route("/search", get(routes::search_root))
        // The UI issues the term-less search as `/search/?offset=&limit=`; the
        // trailing slash matches neither `/search` nor the catch-all, so route
        // it to the same term-less handler classic serves.
        .route("/search/", get(routes::search_root))
        .route("/search/*query", get(routes::search))
        .route("/searchCount", get(routes::search_count_root))
        .route("/searchCount/", get(routes::search_count_root))
        .route("/searchCount/*query", get(routes::search_count))
        .route("/:type/count", get(routes::type_count))
        .route("/rootCollections", get(routes::root_collections))
        .route("/manage", get(routes::manage))
        .route("/shared", get(routes::shared))
        .route(
            "/public/:collectionId/:displayId/:version/uses",
            get(routes::public_uses),
        )
        .route(
            "/public/:collectionId/:displayId/:version/usesCount",
            get(routes::public_uses_count),
        )
        .route(
            "/public/:collectionId/:displayId/:version/similar",
            get(sequence::public_similar),
        )
        .route(
            "/public/:collectionId/:displayId/:version/similarCount",
            get(sequence::public_similar_count),
        )
        .route(
            "/public/:collectionId/:displayId/:version/twins",
            get(routes::public_twins),
        )
        .route(
            "/public/:collectionId/:displayId/:version/twinsCount",
            get(routes::public_twins_count),
        )
        .route(
            "/public/:collectionId/:displayId/:version/subCollections",
            get(routes::public_sub_collections),
        )
        .route(
            "/public/:collectionId/:displayId/:version/metadata",
            get(routes::public_metadata),
        )
        // Version-less relations: the UI fetches these off the persistent
        // identity (no version), which resolves to the latest version.
        .route(
            "/public/:collectionId/:displayId/uses",
            get(routes::public_uses_pi),
        )
        .route(
            "/public/:collectionId/:displayId/usesCount",
            get(routes::public_uses_count_pi),
        )
        .route(
            "/public/:collectionId/:displayId/similar",
            get(sequence::public_similar_pi),
        )
        .route(
            "/public/:collectionId/:displayId/similarCount",
            get(sequence::public_similar_count_pi),
        )
        .route(
            "/public/:collectionId/:displayId/twins",
            get(routes::public_twins_pi),
        )
        .route(
            "/public/:collectionId/:displayId/twinsCount",
            get(routes::public_twins_count_pi),
        )
        .route(
            "/public/:collectionId/:displayId/subCollections",
            get(routes::public_sub_collections_pi),
        )
        .route(
            "/public/:collectionId/:displayId/metadata",
            get(routes::public_metadata_pi),
        )
        // Download surface: the object's closure rendered in each exchange
        // format, ACL-scoped through the shared downloader and P3 serializers.
        .route(
            "/public/:collectionId/:displayId/:version/sbol",
            get(download::public_sbol),
        )
        .route(
            "/public/:collectionId/:displayId/:version/sbolnr",
            get(download::public_sbolnr),
        )
        .route(
            "/public/:collectionId/:displayId/:version/gb",
            get(download::public_genbank),
        )
        .route(
            "/public/:collectionId/:displayId/:version/fasta",
            get(download::public_fasta),
        )
        .route(
            "/public/:collectionId/:displayId/:version/gff",
            get(download::public_gff),
        )
        .route(
            "/public/:collectionId/:displayId/:version/omex",
            get(download::public_omex),
        )
        .route(
            "/public/:collectionId/:displayId/:version/summary",
            get(download::public_summary),
        )
        // Attachment surface: store an uploaded file or an external URL as a
        // first-class attachment, and stream a stored blob back. The attach
        // verbs are owner-gated; the download read is ACL-scoped.
        .route(
            "/public/:collectionId/:displayId/:version/attach",
            post(attachments::public_attach),
        )
        .route(
            "/public/:collectionId/:displayId/:version/attachUrl",
            post(attachments::public_attach_url),
        )
        .route(
            "/public/:collectionId/:displayId/:version/download",
            get(attachments::public_download),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/uses",
            get(routes::user_uses),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/usesCount",
            get(routes::user_uses_count),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/similar",
            get(sequence::user_similar),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/similarCount",
            get(sequence::user_similar_count),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/twins",
            get(routes::user_twins),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/twinsCount",
            get(routes::user_twins_count),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/subCollections",
            get(routes::user_sub_collections),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/metadata",
            get(routes::user_metadata),
        )
        // Version-less relations (resolve to the latest version).
        .route(
            "/user/:userId/:collectionId/:displayId/uses",
            get(routes::user_uses_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/usesCount",
            get(routes::user_uses_count_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/similar",
            get(sequence::user_similar_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/similarCount",
            get(sequence::user_similar_count_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/twins",
            get(routes::user_twins_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/twinsCount",
            get(routes::user_twins_count_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/subCollections",
            get(routes::user_sub_collections_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/metadata",
            get(routes::user_metadata_pi),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/sbol",
            get(download::user_sbol),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/sbolnr",
            get(download::user_sbolnr),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/gb",
            get(download::user_genbank),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/fasta",
            get(download::user_fasta),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/gff",
            get(download::user_gff),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/omex",
            get(download::user_omex),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/summary",
            get(download::user_summary),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/attach",
            post(attachments::user_attach),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/attachUrl",
            post(attachments::user_attach_url),
        )
        .route(
            "/user/:userId/:collectionId/:displayId/:version/download",
            get(attachments::user_download),
        )
        .route_layer(axum::middleware::from_fn_with_state(
            state.clone(),
            attach_current_user,
        ));
    // The admin surface carries its own identity + admin gate, so it is merged
    // in after the public routes rather than sharing their route layer.
    public
        .merge(admin::router(state))
        .route_layer(axum::middleware::from_fn(metrics::track_synbiohub_v1_usage))
}

/// Resolve the `X-authorization` token to the caller's account and attach it to
/// the request as a [`CurrentUser`] extension. A missing or unrecognized token
/// yields an anonymous `CurrentUser(None)` rather than a rejection; each route
/// decides whether it requires authentication.
pub async fn attach_current_user(
    State(state): State<AppState>,
    mut req: Request,
    next: Next,
) -> Response {
    let token = req
        .headers()
        .get("x-authorization")
        .and_then(|v| v.to_str().ok())
        .map(str::to_owned);
    let user = match token {
        Some(token) if !token.is_empty() => resolve_user(&state, &token).await,
        _ => None,
    };
    req.extensions_mut().insert(CurrentUser(user));
    next.run(req).await
}

/// Resolve a plaintext token to the account it authenticates, tolerating a
/// stale or bogus token (which resolves to `None`).
async fn resolve_user(state: &AppState, token: &str) -> Option<User> {
    let user_id = state.app.auth.resolve_token(token).await.ok().flatten()?;
    state.app.users.get_by_id(user_id).await.ok().flatten()
}

#[cfg(test)]
mod tests {
    use std::sync::Arc;

    use axum::body::{to_bytes, Body};
    use axum::extract::Extension;
    use axum::http::{Request, StatusCode};
    use axum::routing::get;
    use axum::Router;
    use sbol_db_app::{AppServices, Registration};
    use sbol_db_backend::Backend;
    use sbol_db_sparql::{SparqlEngine, SparqlUpdateEngine};
    use tempfile::TempDir;
    use tower::ServiceExt;

    use super::*;
    use crate::{Metrics, SchemaCache, ServerConfig};

    /// A probe handler reporting the resolved identity: the authenticated
    /// username, or `anonymous` when the middleware attached no account.
    async fn whoami(Extension(CurrentUser(user)): Extension<CurrentUser>) -> String {
        user.map(|u| u.username)
            .unwrap_or_else(|| "anonymous".to_owned())
    }

    /// Build a real [`AppState`] over a fresh SQLite backend, register one
    /// account, and mint it a token. Returns the state, the account's plaintext
    /// token, its username, and the `TempDir` owning the database file.
    async fn state_with_user() -> (AppState, String, String, TempDir) {
        let dir = tempfile::tempdir().expect("tempdir");
        let path = dir.path().join("mw.db");
        let url = format!("sqlite://{}", path.display());
        let backend = Backend::open(&url).await.expect("open sqlite backend");
        backend
            .migrator
            .as_ref()
            .expect("sqlite backend has a migrator")
            .run_migrations()
            .await
            .expect("run migrations");

        let sparql = Arc::new(SparqlEngine::new(backend.triple_source.clone()));
        let sparql_update = Arc::new(SparqlUpdateEngine::new(
            backend.triple_source.clone(),
            backend.triple_writer.clone(),
        ));
        let app = Arc::new(AppServices::from_backend(&backend));
        let user = app
            .auth
            .register(Registration {
                username: "alice".to_owned(),
                name: "Alice".to_owned(),
                email: "alice@example.org".to_owned(),
                affiliation: None,
                password: "s3cret".to_owned(),
                is_admin: false,
                is_curator: false,
                is_member: true,
            })
            .await
            .expect("register");
        let token = app.auth.issue_token(user.id).await.expect("issue token");

        let state = AppState {
            service: backend.store.clone(),
            sparql,
            sparql_update,
            app,
            metrics: Metrics::install(None, env!("CARGO_PKG_VERSION")),
            jobs: backend.jobs.clone(),
            lab: backend.lab.clone(),
            config: ServerConfig::default(),
            backend_kind: backend.kind,
            sql_console: backend.sql_console.clone(),
            db_stats: backend.db_stats.clone(),
            lsm_stats: backend.lsm_stats.clone(),
            schema_cache: Arc::new(SchemaCache::new()),
        };
        (state, token, user.username, dir)
    }

    /// A router that runs `attach_current_user` ahead of the `whoami` probe.
    fn probe(state: AppState) -> Router {
        Router::new()
            .route("/whoami", get(whoami))
            .route_layer(axum::middleware::from_fn_with_state(
                state.clone(),
                attach_current_user,
            ))
            .with_state(state)
    }

    async fn whoami_with(app: &Router, header: Option<&str>) -> (StatusCode, String) {
        let mut builder = Request::builder().method("GET").uri("/whoami");
        if let Some(token) = header {
            builder = builder.header("x-authorization", token);
        }
        let res = app
            .clone()
            .oneshot(builder.body(Body::empty()).unwrap())
            .await
            .expect("whoami request");
        let status = res.status();
        let bytes = to_bytes(res.into_body(), 64 * 1024).await.expect("body");
        (status, String::from_utf8(bytes.to_vec()).expect("utf8"))
    }

    #[tokio::test]
    async fn valid_token_resolves_current_user() {
        let (state, token, username, _dir) = state_with_user().await;
        let app = probe(state);
        let (status, body) = whoami_with(&app, Some(&token)).await;
        assert_eq!(status, StatusCode::OK);
        assert_eq!(body, username, "the token should resolve to its account");
    }

    #[tokio::test]
    async fn missing_or_bad_token_is_anonymous() {
        let (state, _token, _username, _dir) = state_with_user().await;
        let app = probe(state);

        // No header: anonymous, not an error.
        let (status, body) = whoami_with(&app, None).await;
        assert_eq!(status, StatusCode::OK);
        assert_eq!(body, "anonymous");

        // An unrecognized token also resolves to anonymous.
        let (status, body) = whoami_with(&app, Some("not-a-real-token")).await;
        assert_eq!(status, StatusCode::OK);
        assert_eq!(body, "anonymous");
    }

    /// Build the full V1 router and drive a read route and an auth-gated route,
    /// which also exercises route registration (a conflict would panic here).
    async fn v1_router() -> (Router, TempDir) {
        let (state, _token, _username, dir) = state_with_user().await;
        (router(state.clone()).with_state(state), dir)
    }

    async fn send_get(app: &Router, uri: &str, token: Option<&str>) -> (StatusCode, String) {
        let mut builder = Request::builder().method("GET").uri(uri);
        if let Some(token) = token {
            builder = builder.header("x-authorization", token);
        }
        let res = app
            .clone()
            .oneshot(builder.body(Body::empty()).unwrap())
            .await
            .expect("request");
        let status = res.status();
        let bytes = to_bytes(res.into_body(), 256 * 1024).await.expect("body");
        (status, String::from_utf8(bytes.to_vec()).expect("utf8"))
    }

    #[tokio::test]
    async fn read_routes_register_and_respond() {
        let (app, _dir) = v1_router().await;

        // Classic serves the count as a bare integer in a text/plain body; an
        // empty store counts zero.
        let (status, body) = send_get(&app, "/ComponentDefinition/count", None).await;
        assert_eq!(status, StatusCode::OK);
        assert_eq!(body.trim(), "0", "count response: {body}");

        // The ranked free-text path returns classic's JSON array; empty here.
        let (status, body) = send_get(&app, "/search/plasmid", None).await;
        assert_eq!(status, StatusCode::OK);
        assert_eq!(body.trim(), "[]", "search response: {body}");

        // The UI's term-less search carries a trailing slash and paging in the
        // query string; classic accepts it, so the trailing-slash forms resolve
        // to the same term-less handlers rather than 404.
        let (status, body) = send_get(&app, "/search/?offset=0&limit=50", None).await;
        assert_eq!(status, StatusCode::OK, "GET /search/ must resolve");
        assert_eq!(body.trim(), "[]", "term-less search response: {body}");
        let (status, body) = send_get(&app, "/searchCount/", None).await;
        assert_eq!(status, StatusCode::OK, "GET /searchCount/ must resolve");
        assert_eq!(body.trim(), "0", "term-less count response: {body}");

        // The UI's sequence-search form submits an empty `globalsequence=`
        // before a sequence is entered; classic answers with no matches rather
        // than treating the key as an RDF predicate (which would 400).
        let (status, body) = send_get(&app, "/search/globalsequence=&", None).await;
        assert_eq!(status, StatusCode::OK, "empty sequence search must resolve");
        assert_eq!(body.trim(), "[]", "empty sequence search response: {body}");
        let (status, body) = send_get(&app, "/searchCount/globalsequence=&", None).await;
        assert_eq!(status, StatusCode::OK, "empty sequence count must resolve");
        assert_eq!(body.trim(), "0", "empty sequence count response: {body}");

        // Root collections is SPARQL over the accelerator.
        let (status, _body) = send_get(&app, "/rootCollections", None).await;
        assert_eq!(status, StatusCode::OK);

        // /browse is the root-collections listing in classic's richer shape.
        let (status, body) = send_get(&app, "/browse", None).await;
        assert_eq!(status, StatusCode::OK, "/browse must resolve");
        assert_eq!(body.trim(), "[]", "empty /browse: {body}");

        // A version-less relation on a nonexistent object resolves to 404, not a
        // 500 -- the persistent identity has no visible version.
        let (status, _body) = send_get(&app, "/public/nope/nope/usesCount", None).await;
        assert_eq!(
            status,
            StatusCode::NOT_FOUND,
            "missing version-less object is 404"
        );
    }

    #[tokio::test]
    async fn manage_and_shared_require_identity() {
        let (app, _dir) = v1_router().await;
        let (status, _body) = send_get(&app, "/manage", None).await;
        assert_eq!(status, StatusCode::UNAUTHORIZED);
        let (status, _body) = send_get(&app, "/shared", None).await;
        assert_eq!(status, StatusCode::UNAUTHORIZED);
    }
}