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extern crate rand;
extern crate special;
use self::rand::Rng;
use self::special::Gamma as SGamma;
use data::Partition;
use misc::pflip;
use std::io;
use traits::*;
#[derive(Serialize, Deserialize, Debug, Clone)]
pub struct Crp {
pub alpha: f64,
pub n: usize,
}
impl Crp {
pub fn new(alpha: f64, n: usize) -> io::Result<Self> {
let alpha_ok = alpha > 0.0 && alpha.is_finite();
let n_ok = n > 0;
if !alpha_ok {
let err_kind = io::ErrorKind::InvalidInput;
let msg = "α must be greater than zero and finite";
let err = io::Error::new(err_kind, msg);
Err(err)
} else if !n_ok {
let err_kind = io::ErrorKind::InvalidInput;
let msg = "n must be greater than zero";
let err = io::Error::new(err_kind, msg);
Err(err)
} else {
Ok(Crp { alpha, n })
}
}
}
impl Rv<Partition> for Crp {
fn ln_f(&self, x: &Partition) -> f64 {
let gsum = x
.counts
.iter()
.fold(0.0, |acc, ct| acc + (*ct as f64).ln_gamma().0);
gsum + (x.k() as f64) * self.alpha.ln() + self.alpha.ln_gamma().0
- (x.len() as f64 + self.alpha).ln_gamma().0
}
#[inline]
fn ln_normalizer(&self) -> f64 {
0.0
}
fn draw<R: Rng>(&self, rng: &mut R) -> Partition {
let mut k = 1;
let mut weights: Vec<f64> = vec![1.0];
let mut z: Vec<usize> = Vec::with_capacity(self.n);
z.push(0);
for _ in 1..self.n {
weights.push(self.alpha);
let zi = pflip(&weights, 1, rng)[0];
z.push(zi);
if zi == k {
weights[zi] = 1.0;
k += 1;
} else {
weights.truncate(k);
weights[zi] += 1.0;
}
}
let counts: Vec<usize> =
weights.iter().map(|w| (w + 0.5) as usize).collect();
Partition { z, counts }
}
}
impl Support<Partition> for Crp {
#[inline]
fn contains(&self, _x: &Partition) -> bool {
true
}
}
#[cfg(test)]
mod tests {
extern crate assert;
use super::*;
const TOL: f64 = 1E-12;
#[test]
fn new() {
let crp = Crp::new(1.2, 808).unwrap();
assert::close(crp.alpha, 1.2, TOL);
assert_eq!(crp.n, 808);
}
}