[package]
edition = "2018"
name = "rust-htslib"
version = "1.0.0"
authors = [
"Christopher Schröder <christopher.schroeder@tu-dortmund.de>",
"Johannes Köster <johannes.koester@tu-dortmund.de>",
]
build = false
include = [
"src/**/*",
"LICENSE.md",
"README.md",
"CHANGELOG.md",
]
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files."
documentation = "https://docs.rs/rust-htslib"
readme = "README.md"
keywords = [
"htslib",
"bam",
"bioinformatics",
"pileup",
"sequencing",
]
license = "MIT"
repository = "https://github.com/rust-bio/rust-htslib.git"
[package.metadata.release]
pre-release-commit-message = "release version {{version}}"
tag-message = "Version {{version}} of Rust-HTSlib."
[features]
bindgen = ["hts-sys/bindgen"]
bzip2 = ["hts-sys/bzip2"]
curl = ["hts-sys/curl"]
default = [
"bzip2",
"lzma",
"curl",
]
gcs = ["hts-sys/gcs"]
libdeflate = ["hts-sys/libdeflate"]
lzma = ["hts-sys/lzma"]
s3 = ["hts-sys/s3"]
serde_feature = [
"serde",
"serde_bytes",
"bio-types/serde",
]
static = ["hts-sys/static"]
[lib]
name = "rust_htslib"
path = "src/lib.rs"
[dependencies.bio-types]
version = ">=0.9"
[dependencies.byteorder]
version = "1.3"
[dependencies.custom_derive]
version = "0.1"
[dependencies.derive-new]
version = "0.7"
[dependencies.hts-sys]
version = "2.2.0"
features = ["bindgen"]
default-features = false
[dependencies.ieee754]
version = "0.2"
[dependencies.lazy_static]
version = "1.4"
[dependencies.libc]
version = "0.2"
[dependencies.libz-sys]
version = ">=1.1.15"
[dependencies.linear-map]
version = "1.2"
[dependencies.newtype_derive]
version = "0.1"
[dependencies.regex]
version = "1.3"
[dependencies.serde]
version = "^1"
features = ["derive"]
optional = true
[dependencies.serde_bytes]
version = "0.11"
optional = true
[dependencies.thiserror]
version = "^2"
[dependencies.url]
version = "2.5"
[dev-dependencies.bincode]
version = "1.2"
[dev-dependencies.pretty_assertions]
version = "1.4"
[dev-dependencies.serde_json]
version = "1.0"
[dev-dependencies.tempfile]
version = "3.1.0"