rsomics-seq-stats 0.1.0

Quick stats for any FASTA/FASTQ — count, total bp, N50, GC%, min/max/mean length
Documentation 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69

# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
rust-version = "1.91"
name = "rsomics-seq-stats"
version = "0.1.0"
authors = ["Zane Leong <efd@live.com>"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Quick stats for any FASTA/FASTQ — count, total bp, N50, GC%, min/max/mean length"
readme = false
license = "MIT OR Apache-2.0"
repository = "https://github.com/omics-rust/rsomics-world"

[lib]
name = "rsomics_seq_stats"
path = "src/lib.rs"

[[bin]]
name = "rsomics-seq-stats"
path = "src/main.rs"

[[test]]
name = "compat"
path = "tests/compat.rs"

[[test]]
name = "smoke"
path = "tests/smoke.rs"

[dependencies.clap]
version = "4"
features = ["derive"]

[dependencies.needletail]
version = "0.7"
features = ["compression"]
default-features = false

[dependencies.rsomics-common]
version = "0.6"

[dependencies.rsomics-help]
version = "0.3"

[lints.clippy]
missing_errors_doc = "allow"
missing_panics_doc = "allow"

[lints.clippy.pedantic]
level = "warn"
priority = -1

[lints.rust]
unsafe_code = "forbid"