[package]
edition = "2024"
rust-version = "1.91"
name = "rsomics-seq-grep"
version = "0.1.1"
authors = ["Zane Leong <efd@live.com>"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Filter FASTA/FASTQ records by ID/name/sequence — seqkit grep port"
readme = "README.md"
keywords = [
"fasta",
"fastq",
"grep",
"bioinformatics",
"seqkit",
]
categories = [
"science",
"command-line-utilities",
]
license = "MIT OR Apache-2.0"
repository = "https://github.com/omics-rust/rsomics-seq-grep"
[lib]
name = "rsomics_seq_grep"
path = "src/lib.rs"
doctest = false
[[bin]]
name = "rsomics-seq-grep"
path = "src/main.rs"
[[test]]
name = "compat"
path = "tests/compat.rs"
[[bench]]
name = "bench"
path = "benches/bench.rs"
harness = false
[dependencies.clap]
version = "4"
features = ["derive"]
[dependencies.memchr]
version = "2"
[dependencies.needletail]
version = "0.6"
[dependencies.rayon]
version = "1"
[dependencies.regex]
version = "1"
[dependencies.rsomics-common]
version = "0.6"
[dependencies.rsomics-help]
version = "0.3"
[dependencies.serde]
version = "1"
features = ["derive"]
[dev-dependencies.criterion]
version = "0.7"
features = ["cargo_bench_support"]
default-features = false
[dev-dependencies.tempfile]
version = "3"