rsfgsea 0.2.4

High-performance fgsea-compatible preranked Gene Set Enrichment Analysis in Rust
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
#[cfg(feature = "gpu")]
pub use crate::algo::run_gsea_gpu_with_config;
pub use crate::algo::{
    calculate_es_fgsea, fgsea, fgsea_multilevel_with_sample_size, fgsea_simple_with_sample_size,
    fgsea_with_sample_size,
};
pub use crate::bindings::{
    ExecutionPlan, InterfaceMode, parse_interface_mode, resolve_execution_plan,
};
pub use crate::core::{
    EnrichmentResult, EnrichmentResultExport, Pathway, PathwayDb, RankedList, ScoreType,
};
pub use crate::io::{read_gmt, read_ranked_list};

#[cfg(feature = "gpu")]
pub use crate::gpu::GpuEngine;