Struct frust5_api::MultiFast5File

pub struct MultiFast5File { /* private fields */ }

Struct representing a “Multi” Fast5 file.

Implementations

impl MultiFast5File

pub fn new(filename: String, mode: OpenMode) -> MultiFast5File

Create a new MultiFast5 file - for either reading or writing.

Panics

• Currently if opening for writing and the file already exists, as tries to write attributes that already exist
• If opening for reading and the file doesn’t already exist.

Examples

use frust5_api::{MultiFast5File. OpenMode}
 
let mut multi = frust5_api::MultiFast5File::new("test.fast5".to_string(), frust5_api::OpenMode::Append);

pub fn create_empty_read(
    &mut self,
    read_id: String,
    run_id: String,
    tracking_id: &HashMap<&str, &str>,
    context_tags: &HashMap<&str, &str>,
    channel_info: ChannelInfo,
    raw_attrs: &HashMap<&str, RawAttrsOpts<'_>>
) -> Result<Group, Error>

Diverged from ONT come back and straight up rework Create and empty read group, and populate all the fields for it. MISNOMER - doesn’t return an empty read, returns a populated read.