[package]
edition = "2024"
rust-version = "1.93"
name = "quadrank"
version = "0.2.0"
authors = ["Ragnar Groot Koerkamp"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Fast rank over binary and size-4 DNA alphabets."
readme = "README.md"
keywords = [
"rank",
"prefetch",
"data-structure",
"succinct",
"bioinformatics",
]
categories = ["science"]
license = "MIT"
repository = "https://github.com/RagnarGrootKoerkamp/quadrank"
[[package.metadata.release.pre-release-replacements]]
file = "CHANGELOG.md"
search = "## git"
replace = "## {{version}}"
exactly = 1
[[package.metadata.release.pre-release-replacements]]
file = "CHANGELOG.md"
search = "<!-- next-header -->"
replace = """
<!-- next-header -->
## git"""
exactly = 1
[features]
ext = [
"dep:qwt",
"dep:sux",
"dep:genedex",
"dep:bitm",
"dep:bio",
"dep:bv",
"dep:rsdict",
"dep:succinct",
"dep:sucds",
"dep:vers-vecs",
]
[lib]
name = "quadrank"
path = "src/lib.rs"
[[example]]
name = "bench"
path = "examples/bench.rs"
required-features = ["ext"]
[dependencies.bio]
version = "3.0.0"
optional = true
[dependencies.bitm]
version = "0.5.2"
optional = true
[dependencies.bv]
version = "0.11.1"
optional = true
[dependencies.dyn_size_of]
version = "0.4.5"
[dependencies.genedex]
version = "0.2.2"
optional = true
[dependencies.mem_dbg]
version = "0.3.2"
[dependencies.packed-seq]
version = "4.2.0"
[dependencies.prefetch-index]
version = "0.2.0"
[dependencies.qwt]
version = "0.3.4"
optional = true
[dependencies.rayon]
version = "1.11.0"
[dependencies.rsdict]
version = "0.0.8"
optional = true
[dependencies.succinct]
version = "0.5.2"
optional = true
[dependencies.sucds]
version = "0.8.3"
optional = true
[dependencies.sux]
version = "0.10.3"
optional = true
[dependencies.vers-vecs]
version = "1.8.2"
optional = true
[dependencies.wide]
version = "1.1.1"
[dev-dependencies.clap]
version = "4.5.51"
features = ["derive"]
[dev-dependencies.rand]
version = "0.9.2"
[dev-dependencies.regex]
version = "1.12.2"