predictosaurus 0.3.0

Uncertainty aware haplotype based genomic variant effect prediction
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[[bin]]
name = "predictosaurus"
path = "src/main.rs"

[dependencies.anyhow]
version = "1.0.98"

[dependencies.bio]
version = "2.2.0"

[dependencies.clap]
features = ["derive"]
version = "4.5.37"

[dependencies.clap_derive]
version = "4.5.3"

[dependencies.colored]
version = "3"

[dependencies.csv]
version = "1.3.1"

[dependencies.duckdb]
features = ["bundled"]
version = "1.2.2"

[dependencies.env_logger]
version = "0.11.6"

[dependencies.itertools]
version = "0.14.0"

[dependencies.json5]
version = "0.4.1"

[dependencies.log]
version = "0.4.27"

[dependencies.petgraph]
features = ["serde-1"]
version = "0.8.1"

[dependencies.rayon]
version = "1.10.0"

[dependencies.rust-htslib]
version = "0.49.0"

[dependencies.serde]
features = ["derive"]
version = "1.0.219"

[dependencies.serde_json]
version = "1.0.140"

[dependencies.tera]
version = "1.20.0"

[dependencies.varlociraptor]
version = "8.7.1"

[dev-dependencies.tempfile]
version = "3.19.1"

[lints.rust]
unused = "allow"

[package]
authors = ["Felix Wiegand <felix.wiegand@tu-dortmund.de>", "Johannes Köster <johannes.koester@tu-dortmund.de>"]
autobenches = false
autobins = false
autoexamples = false
autolib = false
autotests = false
build = false
description = "Uncertainty aware haplotype based genomic variant effect prediction"
edition = "2021"
license = "MIT"
name = "predictosaurus"
readme = "README.md"
version = "0.3.0"

[profile.release]
lto = "fat"