peacoqc-cli 0.3.0

Command-line tool for PeacoQC flow cytometry quality control
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "peacoqc-cli"
version = "0.3.0"
authors = ["James Moynihan"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Command-line tool for PeacoQC flow cytometry quality control"
readme = "README.md"
keywords = [
    "flow-cytometry",
    "quality-control",
    "bioinformatics",
    "command-line",
]
categories = [
    "science",
    "command-line-utilities",
]
license = "MIT"
repository = "https://github.com/jrmoynihan/flow/peacoqc-cli"

[package.metadata.scripts]
test = "cargo nextest run"
dry-release = "cargo smart-release peacoqc-cli --update-crates-index"
publish = "cargo smart-release peacoqc-cli --update-crates-index --execute"
changelog = "cargo changelog peacoqc-cli --write"

[[bin]]
name = "peacoqc"
path = "src/main.rs"

[dependencies.anyhow]
version = "1.0.102"

[dependencies.clap]
version = "4.5.60"
features = [
    "derive",
    "cargo",
]

[dependencies.dialoguer]
version = "0.12"

[dependencies.flow-fcs]
version = "^0.5.2"

[dependencies.indicatif]
version = "0.18.3"

[dependencies.peacoqc-rs]
version = "^0.3.3"
features = [
    "flow-fcs",
    "gpu",
]

[dependencies.rayon]
version = "1.11"

[dependencies.serde_json]
version = "1.0.149"

[dependencies.tempfile]
version = "3.26"

[dependencies.tracing]
version = "0.1"

[dependencies.tracing-subscriber]
version = "0.3"
features = [
    "env-filter",
    "fmt",
]

[dependencies.walkdir]
version = "2.5"