pathrex-sys 0.1.0

Native FFI bindings for SuiteSparse:GraphBLAS and LAGraph used by the pathrex crate.
Documentation
#include <acutest.h>
#include <stdio.h>

#include "LG_internal.h"
#include <LAGraphX.h>
#include <LAGraph_test.h>
#include <LG_Xtest.h>

char msg[LAGRAPH_MSG_LEN];
LAGraph_Graph G = NULL;
GrB_Vector mateC = NULL;
GrB_Vector mateR = NULL;
GrB_Vector mateC_init = NULL;
GrB_Vector mateR_init = NULL;

#define LEN 512
char filename[LEN + 1];

#define NTESTS 5

const char *filenames[NTESTS] = {"random_weighted_bipartite2.mtx",
                                 "test_FW_2500.mtx", "LFAT5_hypersparse.mtx",
                                 "lp_afiro_structure.mtx", "sources_7.mtx"};
const uint64_t spranks[NTESTS] = {298, 2009, 14, 27, 1};

#if 0
#undef OK
#define OK(method) \
{ \
    GrB_Info info2 = method ; \
    if (info2 != GrB_SUCCESS) \
    { \
        printf ("info: %d, msg: %s\n", info2, msg) ; \
        TEST_CHECK (false) ; \
    } \
}
#endif

void test_MCM(void)
{
#if LAGRAPH_SUITESPARSE
    LAGraph_Init(msg);

//  OK(LG_SET_BURBLE(1));

    for (uint8_t jit = 0; jit < 2; jit++)
    {
        uint8_t JIT_flag = jit * 4; // JIT_OFF = 0 and JIT_ON = 4
        OK (LG_SET_JIT (JIT_flag)) ;
        for (uint64_t test = 0; test < NTESTS; test++)
        {

            printf ("\n%s =======================\n", filenames [test]) ;
            GrB_Matrix A = NULL;
            GrB_Matrix AT = NULL;
            snprintf(filename, LEN, LG_DATA_DIR "%s", filenames[test]);
            FILE *f = fopen(filename, "r");
            TEST_CHECK(f != NULL);
            OK(LAGraph_MMRead(&A, f, msg));
            OK(fclose(f));
            GrB_Index nrows = 0, ncols = 0, nvals = 0;
            OK(GrB_Matrix_nrows(&nrows, A));
            OK(GrB_Matrix_ncols(&ncols, A));
            OK(GrB_Matrix_nvals(&nvals, A));

            // make A a bool matrix and iso-valued
            GrB_Index *I, *J, *X;
            double *dummy;
            bool *iso_value;

            OK(LAGraph_Malloc((void **)&I, nvals, sizeof(GrB_Index), msg));
            OK(LAGraph_Malloc((void **)&J, nvals, sizeof(GrB_Index), msg));
            OK(LAGraph_Malloc((void **)&dummy, nvals, sizeof(double), msg));
            OK(LAGraph_Malloc((void **)&iso_value, nvals, sizeof(bool), msg));

            for (uint64_t i = 0; i < nvals; i++)
            {
                iso_value[i] = 1;
            }
            OK(GrB_Matrix_extractTuples_FP64(I, J, dummy, &nvals, A));
            TEST_CHECK(I != NULL);

            OK(GrB_free(&A));
            OK(GrB_Matrix_new(&A, GrB_BOOL, nrows, ncols));
            OK(GrB_Matrix_build_BOOL(A, I, J, iso_value, nvals,
                                     GrB_FIRST_BOOL));

            OK(LAGraph_Free((void **)&I, msg));
            OK(LAGraph_Free((void **)&J, msg));
            OK(LAGraph_Free((void **)&dummy, msg));
            OK(LAGraph_Free((void **)&iso_value, msg));

            OK(GrB_Vector_new(&mateC, GrB_UINT64, ncols));

            if (!strcmp(filenames[test], "lp_afiro_structure.mtx"))
            {
                OK(GrB_Vector_new(&mateC_init, GrB_UINT64, ncols));
                OK(GrB_Vector_new(&mateR_init, GrB_UINT64, nrows));
                OK(GrB_Vector_setElement_UINT64(
                    mateC_init, 0, 19)); // col 20 matched with row 1 (1-based)
                OK(GrB_Vector_setElement_UINT64(
                    mateR_init, 19, 0)); // col 20 matched with row 1 (1-based)
                OK(GrB_Matrix_new(&AT, GrB_BOOL, ncols,
                                  nrows)); // transpose matrix has the reverse
                                           // dimensions from the original
                OK(GrB_transpose(AT, NULL, NULL, A, NULL));
            }

            OK(GrB_free(&mateC));
            OK(LAGr_MaximumMatching(&mateC, NULL, A, AT, mateC_init, true,
                                    msg));
//          printf("\nmsg: %s\n", msg);

            GrB_Index nmatched = 0;

            OK(GrB_Vector_new(&mateR, GrB_UINT64, nrows));

            // invert to check for dups
            GrB_Index Ibytes = 0, Jbytes = 0, Xbytes = 0;
            bool jumbled = 1;
            OK(GxB_Vector_unpack_CSC(mateC, (GrB_Index **)&J, (void **)&X,
                                     &Jbytes, &Xbytes, NULL, &nmatched,
                                     &jumbled, NULL));
            OK(GrB_Vector_build_UINT64(mateR, X, J, nmatched,
                                       GrB_FIRST_UINT64));
            GrB_Index nmateR = 0;
            OK(GrB_Vector_nvals(&nmateR, mateR));
            // if nvals of mateC and mateR don't match, then there's at least
            // one row that is used in at least one matching
            TEST_CHECK(nmatched == nmateR);
            printf ("# of matches: %" PRIu64 "\n", nmatched) ;

            // pack matched values in a matrix
            GrB_Matrix M = NULL;
            bool *val;
            OK(LAGraph_Malloc((void **)&val, nmatched, sizeof(bool), msg));
            for (uint64_t i = 0; i < nmatched; i++)
            {
                val[i] = 1;
            }
            OK(GrB_Matrix_new(&M, GrB_BOOL, nrows, ncols));
            OK(GrB_Matrix_build_BOOL(M, X, J, val, nmatched, NULL));
            OK(LAGraph_Free((void **)&val, msg));
            OK(LAGraph_Free((void **)&J, msg));
            OK(LAGraph_Free((void **)&X, msg));
            // mask with matrix A to check if all edges are present in A
            OK(GrB_Matrix_assign(M, M, NULL, A, GrB_ALL, nrows, GrB_ALL, ncols,
                                 GrB_DESC_S));
            GrB_Index nvalsM = 0;
            OK(GrB_Matrix_nvals(&nvalsM, M));
            // if values have been eliminated then edges do not exist in A
            TEST_CHECK(nvalsM == nmatched);

            // sprank must be equal to nvals of mateC (nmatched)
            TEST_CHECK(nmatched == spranks[test]);

            OK(GrB_free(&mateC));
            OK(GrB_free(&mateR));
            OK(GrB_free(&M));

            // return both mateR and mateC
            OK(LAGr_MaximumMatching(&mateC, &mateR, A, AT, mateC_init, true,
                                    msg));
            GrB_Index nmateC = 0 ;
            nmateR = 0 ;
            OK(GrB_Vector_nvals(&nmateC, mateC));
            OK(GrB_Vector_nvals(&nmateR, mateR));
            TEST_CHECK(nmateC == nmateR);
            TEST_CHECK(nmateC == nmatched);
            OK(GrB_free(&mateC));
            OK(GrB_free(&mateR));

            // ensure AT exists, and pass in AT only, and use mateR_init
            if (AT == NULL)
            {
                OK(GrB_Matrix_new(&AT, GrB_BOOL, ncols, nrows));
                OK(GrB_transpose(AT, NULL, NULL, A, NULL));
            }
            OK(LAGr_MaximumMatching(&mateC, &mateR, NULL, AT, mateR_init, false,
                                    msg));
            nmateC = 0 ;
            nmateR = 0 ;
            OK(GrB_Vector_nvals(&nmateC, mateC));
            OK(GrB_Vector_nvals(&nmateR, mateR));
            TEST_CHECK(nmateC == nmateR);
            TEST_CHECK(nmateC == nmatched);
            OK(GrB_free(&mateC));
            OK(GrB_free(&mateR));

            OK(GrB_free(&mateC_init));
            OK(GrB_free(&mateR_init));
            OK(GrB_free(&A));
            OK(GrB_free(&AT));

        }
    }
    LAGraph_Finalize(msg);
#endif
}

TEST_LIST = {{"MaximumMatching", test_MCM}, // just one test in this example
             {NULL, NULL}};