packed-seq 5.1.1

Constructing and iterating packed DNA sequences using SIMD
Documentation 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103

# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
name = "packed-seq"
version = "5.1.1"
authors = [
    "Ragnar Groot Koerkamp",
    "Igor Martayan",
]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Constructing and iterating packed DNA sequences using SIMD"
readme = "README.md"
keywords = [
    "packed",
    "simd",
    "dna",
    "bioinformatics",
]
categories = [
    "compression",
    "data-structures",
    "science::bioinformatics",
]
license = "MIT"
repository = "https://github.com/rust-seq/packed-seq"

[package.metadata.docs.rs]
features = [
    "rand",
    "file_io",
    "ef_seq",
]
rustdoc-args = [
    "--cfg",
    "docsrs",
]

[features]
default = ["rand"]
ef_seq = ["sux"]
epserde = [
    "dep:epserde",
    "sux?/epserde",
]
file_io = ["helicase"]
scalar = ["ensure_simd/scalar"]

[lib]
name = "packed_seq"
path = "src/lib.rs"

[[test]]
name = "from_fastx"
path = "tests/from_fastx.rs"

[dependencies.cfg-if]
version = "1.0"

[dependencies.ensure_simd]
version = "0.1.0"

[dependencies.epserde]
version = "0.13"
optional = true

[dependencies.helicase]
version = "1.0.0"
features = ["bz2"]
optional = true

[dependencies.mem_dbg]
version = "0.4"

[dependencies.pyo3]
version = "0.30"
features = ["extension-module"]
optional = true

[dependencies.rand]
version = "0.10"
optional = true

[dependencies.sux]
version = "0.15"
optional = true

[dependencies.wide]
version = "1.7"