oxo-flow-cli 0.14.0

CLI for the oxo-flow bioinformatics pipeline engine
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
name = "oxo-flow-cli"
version = "0.14.0"
authors = ["Traitome <https://github.com/Traitome>"]
build = false
include = [
    "src/**/*",
    "schema/**/*",
    "templates/**/*",
    "README.md",
    "LICENSE",
]
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "CLI for the oxo-flow bioinformatics pipeline engine"
homepage = "https://github.com/Traitome/oxo-flow"
readme = false
license = "Apache-2.0"
repository = "https://github.com/Traitome/oxo-flow"
resolver = "2"

[package.metadata.bundle]
name = "oxo-flow"
identifier = "org.oxoflow.oxoflow"
category = "DeveloperTool"
short_description = "Bioinformatics workflow engine with web interface"
resources = ["static/"]
long_description = """
oxo-flow: Rust-native bioinformatics pipeline engine — DAG workflows,
graphical editor, AI-assisted pipeline generation, and cluster execution.
This desktop build starts the local web interface and opens it in your
browser (`oxo-flow serve --open`).
"""

[features]
gcs-storage = ["oxo-flow-core/gcs-storage"]
s3-storage = ["oxo-flow-core/s3-storage"]

[[bin]]
name = "oxo-flow"
path = "src/main.rs"

[dependencies.anyhow]
version = "1.0"

[dependencies.chrono]
version = "0.4"
features = ["serde"]

[dependencies.clap]
version = "4.5"
features = [
    "derive",
    "env",
    "string",
]

[dependencies.clap_complete]
version = "4.5"

[dependencies.colored]
version = "3.0"

[dependencies.csv]
version = "1.4.0"

[dependencies.filetime]
version = "0.2.29"

[dependencies.flate2]
version = "1.0"

[dependencies.glob]
version = "0.3"

[dependencies.indicatif]
version = "0.18"

[dependencies.oxo-flow-ai]
version = "0.14.0"

[dependencies.oxo-flow-core]
version = "0.14.0"

[dependencies.oxo-flow-web]
version = "0.14.0"

[dependencies.oxo-license]
version = "0.1.1"

[dependencies.reqwest]
version = "0.12"
features = [
    "json",
    "rustls-tls",
    "stream",
    "multipart",
]
default-features = false

[dependencies.serde]
version = "1.0"
features = ["derive"]

[dependencies.serde_json]
version = "1.0"

[dependencies.sha2]
version = "0.10"

[dependencies.tar]
version = "0.4"

[dependencies.tempfile]
version = "3"

[dependencies.tokio]
version = "1"
features = ["full"]

[dependencies.toml]
version = "1.1"

[dependencies.tracing]
version = "0.1"

[dependencies.tracing-subscriber]
version = "0.3"
features = [
    "env-filter",
    "json",
]

[dependencies.walkdir]
version = "2"

[dependencies.zstd]
version = "0.13"
default-features = false

[dev-dependencies.assert_cmd]
version = "2.2.0"

[dev-dependencies.oxo-flow-core]
version = "0.14.0"

[dev-dependencies.serde_json]
version = "1.0"

[dev-dependencies.tempfile]
version = "3"

[dev-dependencies.tokio]
version = "1"
features = ["full"]