oxirag 0.1.1

A four-layer RAG engine with SMT-based logic verification and knowledge graph support
Documentation
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
//! Layer 1: Echo - Semantic search with vector embeddings.
//!
//! The Echo layer provides semantic search capabilities using:
//! - Embedding providers to convert text to vectors
//! - Vector stores to index and search documents
//! - Similarity metrics for comparing vectors
//! - Approximate nearest neighbor (ANN) search using HNSW

pub mod ann;
pub mod embedding;
pub mod filter;
pub mod multi_vector;
pub mod similarity;
pub mod similarity_simd;
pub mod storage;
pub mod traits;

pub use ann::{AnnConfig, AnnStats, AnnVectorStore, HnswIndex, HnswNode};
pub use embedding::{
    CacheStats, CachedEmbeddingProvider, CandleDevice, CandleEmbeddingConfig, EmbeddingCacheConfig,
    MockEmbeddingProvider,
};
pub use filter::MetadataFilter;
pub use multi_vector::{
    InMemoryMultiVectorStore, MaxSimScore, MockTokenEmbeddingProvider, MultiVectorDocument,
    MultiVectorSearchResult, MultiVectorStore, TokenEmbedding, TokenEmbeddingProvider, TokenMatch,
};
pub use similarity::{
    batch_similarities, compute_similarity, cosine_similarity, dot_product,
    euclidean_to_similarity, normalize, top_k_similar,
};
pub use storage::InMemoryVectorStore;
pub use traits::{Echo, EmbeddingProvider, IndexedDocument, SimilarityMetric, VectorStore};

#[cfg(feature = "speculator")]
pub use embedding::CandleEmbeddingProvider;

use async_trait::async_trait;

use crate::error::EmbeddingError;
use crate::types::{Document, DocumentId, SearchResult};

/// The default Echo implementation combining an embedding provider and vector store.
pub struct EchoLayer<E: EmbeddingProvider, V: VectorStore> {
    embedding_provider: E,
    vector_store: V,
}

impl<E: EmbeddingProvider, V: VectorStore> EchoLayer<E, V> {
    /// Create a new Echo layer with the given embedding provider and vector store.
    #[must_use]
    pub fn new(embedding_provider: E, vector_store: V) -> Self {
        Self {
            embedding_provider,
            vector_store,
        }
    }

    /// Get a reference to the embedding provider.
    #[must_use]
    pub fn embedding_provider(&self) -> &E {
        &self.embedding_provider
    }

    /// Get a reference to the vector store.
    #[must_use]
    pub fn vector_store(&self) -> &V {
        &self.vector_store
    }

    /// Update an existing document (re-embeds the content).
    /// Returns `Ok(true)` if the document was updated, or an error if not found.
    ///
    /// # Errors
    ///
    /// Returns an error if:
    /// - Embedding generation fails
    /// - The document does not exist in the store
    pub async fn update_document(&mut self, doc: &Document) -> Result<bool, EmbeddingError> {
        let embedding = self.embedding_provider.embed(&doc.content).await?;

        self.vector_store
            .update(&doc.id, embedding)
            .await
            .map_err(|e| EmbeddingError::Backend(e.to_string()))
    }

    /// Insert or update a document (upsert).
    /// Returns `Ok(true)` if inserted, `Ok(false)` if updated.
    ///
    /// # Errors
    ///
    /// Returns an error if:
    /// - Embedding generation fails
    /// - The vector store operation fails (e.g., capacity exceeded for inserts)
    pub async fn upsert_document(&mut self, doc: Document) -> Result<bool, EmbeddingError> {
        let embedding = self.embedding_provider.embed(&doc.content).await?;
        let indexed = IndexedDocument::new(doc, embedding);

        self.vector_store
            .upsert(indexed)
            .await
            .map_err(|e| EmbeddingError::Backend(e.to_string()))
    }

    /// Search for documents similar to the query with metadata filtering.
    ///
    /// This method combines semantic search with metadata filtering, returning
    /// only documents that match both the query similarity and the provided filter.
    ///
    /// # Arguments
    ///
    /// * `query` - The query text to search for.
    /// * `top_k` - Maximum number of results to return.
    /// * `min_score` - Optional minimum similarity score threshold.
    /// * `filter` - Optional metadata filter to apply.
    ///
    /// # Returns
    ///
    /// A vector of search results matching both similarity and filter criteria.
    ///
    /// # Errors
    ///
    /// Returns an error if embedding generation or vector search fails.
    pub async fn search_with_filter(
        &self,
        query: &str,
        top_k: usize,
        min_score: Option<f32>,
        filter: Option<&MetadataFilter>,
    ) -> Result<Vec<SearchResult>, EmbeddingError> {
        let query_embedding = self.embedding_provider.embed(query).await?;

        self.vector_store
            .search_with_filter(&query_embedding, top_k, min_score, filter)
            .await
            .map_err(|e| EmbeddingError::Backend(e.to_string()))
    }
}

#[async_trait]
impl<E: EmbeddingProvider, V: VectorStore> Echo for EchoLayer<E, V> {
    async fn index(&mut self, document: Document) -> Result<DocumentId, EmbeddingError> {
        let embedding = self.embedding_provider.embed(&document.content).await?;
        let id = document.id.clone();
        let indexed = IndexedDocument::new(document, embedding);

        self.vector_store
            .insert(indexed)
            .await
            .map_err(|e| EmbeddingError::Backend(e.to_string()))?;

        Ok(id)
    }

    async fn index_batch(
        &mut self,
        documents: Vec<Document>,
    ) -> Result<Vec<DocumentId>, EmbeddingError> {
        if documents.is_empty() {
            return Ok(Vec::new());
        }

        let contents: Vec<&str> = documents.iter().map(|d| d.content.as_str()).collect();
        let embeddings = self.embedding_provider.embed_batch(&contents).await?;

        let ids: Vec<DocumentId> = documents.iter().map(|d| d.id.clone()).collect();

        let indexed: Vec<IndexedDocument> = documents
            .into_iter()
            .zip(embeddings)
            .map(|(doc, emb)| IndexedDocument::new(doc, emb))
            .collect();

        self.vector_store
            .insert_batch(indexed)
            .await
            .map_err(|e| EmbeddingError::Backend(e.to_string()))?;

        Ok(ids)
    }

    async fn search(
        &self,
        query: &str,
        top_k: usize,
        min_score: Option<f32>,
    ) -> Result<Vec<SearchResult>, EmbeddingError> {
        let query_embedding = self.embedding_provider.embed(query).await?;

        self.vector_store
            .search(&query_embedding, top_k, min_score)
            .await
            .map_err(|e| EmbeddingError::Backend(e.to_string()))
    }

    async fn get(&self, id: &DocumentId) -> Result<Option<Document>, EmbeddingError> {
        let indexed = self
            .vector_store
            .get(id)
            .await
            .map_err(|e| EmbeddingError::Backend(e.to_string()))?;

        Ok(indexed.map(|i| i.document))
    }

    async fn delete(&mut self, id: &DocumentId) -> Result<bool, EmbeddingError> {
        self.vector_store
            .delete(id)
            .await
            .map_err(|e| EmbeddingError::Backend(e.to_string()))
    }

    async fn count(&self) -> usize {
        self.vector_store.count().await
    }

    async fn clear(&mut self) -> Result<(), EmbeddingError> {
        self.vector_store
            .clear()
            .await
            .map_err(|e| EmbeddingError::Backend(e.to_string()))
    }
}

#[cfg(test)]
mod tests {
    use super::*;

    #[tokio::test]
    async fn test_echo_layer_index_and_search() {
        let provider = MockEmbeddingProvider::new(64);
        let store = InMemoryVectorStore::new(64);
        let mut echo = EchoLayer::new(provider, store);

        // Index some documents
        let doc1 = Document::new("The quick brown fox");
        let doc2 = Document::new("A lazy dog sleeps");
        let doc3 = Document::new("The quick brown dog");

        echo.index(doc1).await.unwrap();
        echo.index(doc2).await.unwrap();
        echo.index(doc3).await.unwrap();

        assert_eq!(echo.count().await, 3);

        // Search
        let results = echo.search("quick fox", 2, None).await.unwrap();
        assert_eq!(results.len(), 2);
    }

    #[tokio::test]
    async fn test_echo_layer_batch_index() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        let docs = vec![
            Document::new("Document one"),
            Document::new("Document two"),
            Document::new("Document three"),
        ];

        let ids = echo.index_batch(docs).await.unwrap();
        assert_eq!(ids.len(), 3);
        assert_eq!(echo.count().await, 3);
    }

    #[tokio::test]
    async fn test_echo_layer_get_and_delete() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        let doc = Document::new("Test document");
        let id = doc.id.clone();

        echo.index(doc).await.unwrap();

        // Get
        let retrieved = echo.get(&id).await.unwrap();
        assert!(retrieved.is_some());
        assert_eq!(retrieved.unwrap().content, "Test document");

        // Delete
        let deleted = echo.delete(&id).await.unwrap();
        assert!(deleted);

        // Verify deleted
        let retrieved = echo.get(&id).await.unwrap();
        assert!(retrieved.is_none());
    }

    #[tokio::test]
    async fn test_echo_layer_clear() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        echo.index(Document::new("doc1")).await.unwrap();
        echo.index(Document::new("doc2")).await.unwrap();

        assert_eq!(echo.count().await, 2);

        echo.clear().await.unwrap();
        assert_eq!(echo.count().await, 0);
    }

    #[tokio::test]
    async fn test_echo_layer_update_document() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        let doc = Document::new("original content");
        let id = doc.id.clone();

        echo.index(doc).await.unwrap();

        // Create updated document with same ID
        let mut updated_doc = Document::new("updated content");
        updated_doc.id = id.clone();

        let updated = echo.update_document(&updated_doc).await.unwrap();
        assert!(updated);

        // The document content in the store is not changed by update
        // (only the embedding is updated), so we verify the count is still 1
        assert_eq!(echo.count().await, 1);
    }

    #[tokio::test]
    async fn test_echo_layer_update_nonexistent_document() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        let doc = Document::new("content");
        // Document not indexed, so update should fail
        let result = echo.update_document(&doc).await;
        assert!(result.is_err());
    }

    #[tokio::test]
    async fn test_echo_layer_upsert_new_document() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        let doc = Document::new("new document");
        let id = doc.id.clone();

        let inserted = echo.upsert_document(doc).await.unwrap();
        assert!(inserted); // Should return true for insert

        assert_eq!(echo.count().await, 1);

        let retrieved = echo.get(&id).await.unwrap();
        assert!(retrieved.is_some());
        assert_eq!(retrieved.unwrap().content, "new document");
    }

    #[tokio::test]
    async fn test_echo_layer_upsert_existing_document() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        let doc = Document::new("original document");
        let id = doc.id.clone();

        echo.index(doc).await.unwrap();

        // Create updated document with same ID
        let mut updated_doc = Document::new("updated document");
        updated_doc.id = id.clone();

        let inserted = echo.upsert_document(updated_doc).await.unwrap();
        assert!(!inserted); // Should return false for update

        assert_eq!(echo.count().await, 1);

        let retrieved = echo.get(&id).await.unwrap();
        assert!(retrieved.is_some());
        assert_eq!(retrieved.unwrap().content, "updated document");
    }

    #[tokio::test]
    async fn test_echo_layer_search_with_filter() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        // Index documents with different categories
        echo.index(
            Document::new("Science article about physics").with_metadata("category", "science"),
        )
        .await
        .unwrap();
        echo.index(
            Document::new("Technology news about AI").with_metadata("category", "technology"),
        )
        .await
        .unwrap();
        echo.index(Document::new("Art exhibition review").with_metadata("category", "art"))
            .await
            .unwrap();

        // Search with filter for science category
        let filter = MetadataFilter::eq("category", "science");
        let results = echo
            .search_with_filter("physics", 10, None, Some(&filter))
            .await
            .unwrap();

        assert_eq!(results.len(), 1);
        assert_eq!(
            results[0].document.metadata.get("category"),
            Some(&"science".to_string())
        );
    }

    #[tokio::test]
    async fn test_echo_layer_search_with_filter_complex() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        // Index documents with multiple metadata fields
        echo.index(
            Document::new("Published science paper")
                .with_metadata("category", "science")
                .with_metadata("status", "published"),
        )
        .await
        .unwrap();
        echo.index(
            Document::new("Draft science paper")
                .with_metadata("category", "science")
                .with_metadata("status", "draft"),
        )
        .await
        .unwrap();
        echo.index(
            Document::new("Published tech blog")
                .with_metadata("category", "technology")
                .with_metadata("status", "published"),
        )
        .await
        .unwrap();

        // Search for published science documents
        let filter = MetadataFilter::and(vec![
            MetadataFilter::eq("category", "science"),
            MetadataFilter::eq("status", "published"),
        ]);
        let results = echo
            .search_with_filter("paper", 10, None, Some(&filter))
            .await
            .unwrap();

        assert_eq!(results.len(), 1);
        assert!(results[0].document.content.contains("Published science"));
    }

    #[tokio::test]
    async fn test_echo_layer_search_with_filter_none() {
        let provider = MockEmbeddingProvider::new(32);
        let store = InMemoryVectorStore::new(32);
        let mut echo = EchoLayer::new(provider, store);

        echo.index(Document::new("doc1").with_metadata("cat", "a"))
            .await
            .unwrap();
        echo.index(Document::new("doc2").with_metadata("cat", "b"))
            .await
            .unwrap();

        // Search without filter should return all
        let results = echo
            .search_with_filter("doc", 10, None, None)
            .await
            .unwrap();
        assert_eq!(results.len(), 2);
    }
}