oxicuda-seq 0.3.0

OxiCUDA: Sequence Models & Structured Prediction (HMM/CRF/Kalman/MRF/alignment)
Documentation 
1
2
3
4
5
6
7
8
9

//! RNA secondary-structure folding algorithms.
//!
//! Currently this module provides the Nussinov (1978) maximum-base-pairing
//! dynamic program, which finds a pseudoknot-free secondary structure that
//! maximises the number of complementary base pairs.

pub mod nussinov;

pub use nussinov::{NussinovConfig, NussinovResult, can_pair, nussinov_fold};