nereids-fitting

Optimization engine for fitting resonance models to measured transmission data.

Modules

• [parameters] — Fit parameter types, bounds, constraints
• [lm] — Levenberg-Marquardt least-squares optimizer
• [poisson] — Poisson-likelihood optimizer for low-count data
• [joint_poisson] — Joint-Poisson profile binomial deviance (counts path)
• [nelder_mead] — Bounded Nelder-Mead polish optimizer
• [transmission_model] — Transmission forward model adapter for fitting

SAMMY Reference

• Fitting: fit/ module, fitAPI/, manual Sec 4

TRINIDI Reference

• trinidi/reconstruct.py for Poisson-likelihood and APGM approach