ndarray_einsum_beta 0.7.0

Implementation of the einsum function for the Rust ndarray crate. As popularized in numpy, einsum (Einstein summation) implements general multidimensional tensor contraction. Many linear algebra operations and generalizations of those operations can be expressed as special cases of tensor contraction.
Documentation
// Copyright 2019 Jared Samet
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
//     http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.

//! The `ndarray_einsum` crate implements the `einsum` function, originally
//! implemented for numpy by Mark Wiebe and subsequently reimplemented for
//! other tensor libraries such as Tensorflow and PyTorch. `einsum` (short for Einstein summation)
//! implements general multidimensional tensor contraction. Many linear algebra operations
//! and generalizations of those operations can be expressed as special cases of tensor
//! contraction. Examples include matrix multiplication, matrix trace, vector dot product,
//! tensor Hadamard [element-wise] product, axis permutation, outer product, batch
//! matrix multiplication, bilinear transformations, and many more.
//!
//! Examples (deliberately similar to [numpy's documentation](https://docs.scipy.org/doc/numpy/reference/generated/numpy.einsum.html)):
//!
//! ```
//! # use ndarray_einsum_beta::*;
//! # use ndarray::prelude::*;
//! let a: Array2<f64> = Array::range(0., 25., 1.)
//!     .into_shape((5,5,)).unwrap();
//! let b: Array1<f64> = Array::range(0., 5., 1.);
//! let c: Array2<f64> = Array::range(0., 6., 1.)
//!     .into_shape((2,3,)).unwrap();
//! let d: Array2<f64> = Array::range(0., 12., 1.)
//!     .into_shape((3,4,)).unwrap();
//! ```
//!
//! Trace of a matrix
//! ```
//! # use ndarray_einsum_beta::*;
//! # use ndarray::prelude::*;
//! # let a: Array2<f64> = Array::range(0., 25., 1.)
//! #     .into_shape((5,5,)).unwrap();
//! # let b: Array1<f64> = Array::range(0., 5., 1.);
//! # let c: Array2<f64> = Array::range(0., 6., 1.)
//! #     .into_shape((2,3,)).unwrap();
//! # let d: Array2<f64> = Array::range(0., 12., 1.)
//! #     .into_shape((3,4,)).unwrap();
//! assert_eq!(
//!     einsum("ii", &[&a]).unwrap(),
//!     arr0(60.).into_dyn()
//! );
//! assert_eq!(
//!     einsum("ii", &[&a]).unwrap(),
//!     arr0(a.diag().sum()).into_dyn()
//! );
//! ```
//!
//! Extract the diagonal
//! ```
//! # use ndarray_einsum_beta::*;
//! # use ndarray::prelude::*;
//! # let a: Array2<f64> = Array::range(0., 25., 1.)
//! #     .into_shape((5,5,)).unwrap();
//! # let b: Array1<f64> = Array::range(0., 5., 1.);
//! # let c: Array2<f64> = Array::range(0., 6., 1.)
//! #     .into_shape((2,3,)).unwrap();
//! # let d: Array2<f64> = Array::range(0., 12., 1.)
//! #     .into_shape((3,4,)).unwrap();
//! assert_eq!(
//!     einsum("ii->i", &[&a]).unwrap(),
//!     arr1(&[0., 6., 12., 18., 24.]).into_dyn()
//! );
//! assert_eq!(
//!     einsum("ii->i", &[&a]).unwrap(),
//!     a.diag().into_dyn()
//! );
//!
//! ```
//!
//! Sum over an axis
//! ```
//! # use ndarray_einsum_beta::*;
//! # use ndarray::prelude::*;
//! # let a: Array2<f64> = Array::range(0., 25., 1.)
//! #     .into_shape((5,5,)).unwrap();
//! # let b: Array1<f64> = Array::range(0., 5., 1.);
//! # let c: Array2<f64> = Array::range(0., 6., 1.)
//! #     .into_shape((2,3,)).unwrap();
//! # let d: Array2<f64> = Array::range(0., 12., 1.)
//! #     .into_shape((3,4,)).unwrap();
//! assert_eq!(
//!     einsum("ij->i", &[&a]).unwrap(),
//!     arr1(&[10., 35., 60., 85., 110.]).into_dyn()
//! );
//! assert_eq!(
//!     einsum("ij->i", &[&a]).unwrap(),
//!     a.sum_axis(Axis(1)).into_dyn()
//! );
//!
//! ```
//!
//! Compute matrix transpose
//! ```
//! # use ndarray_einsum_beta::*;
//! # use ndarray::prelude::*;
//! # let a: Array2<f64> = Array::range(0., 25., 1.)
//! #     .into_shape((5,5,)).unwrap();
//! # let b: Array1<f64> = Array::range(0., 5., 1.);
//! # let c: Array2<f64> = Array::range(0., 6., 1.)
//! #     .into_shape((2,3,)).unwrap();
//! # let d: Array2<f64> = Array::range(0., 12., 1.)
//! #     .into_shape((3,4,)).unwrap();
//! assert_eq!(
//!     einsum("ji", &[&c]).unwrap(),
//!     c.t().into_dyn()
//! );
//! assert_eq!(
//!     einsum("ji", &[&c]).unwrap(),
//!     arr2(&[[0., 3.], [1., 4.], [2., 5.]]).into_dyn()
//! );
//! assert_eq!(
//!     einsum("ji", &[&c]).unwrap(),
//!     einsum("ij->ji", &[&c]).unwrap()
//! );
//!
//! ```
//!
//! Multiply two matrices
//! ```
//! # use ndarray_einsum_beta::*;
//! # use ndarray::prelude::*;
//! # let a: Array2<f64> = Array::range(0., 25., 1.)
//! #     .into_shape((5,5,)).unwrap();
//! # let b: Array1<f64> = Array::range(0., 5., 1.);
//! # let c: Array2<f64> = Array::range(0., 6., 1.)
//! #     .into_shape((2,3,)).unwrap();
//! # let d: Array2<f64> = Array::range(0., 12., 1.)
//! #     .into_shape((3,4,)).unwrap();
//! assert_eq!(
//!     einsum("ij,jk->ik", &[&c, &d]).unwrap(),
//!     c.dot(&d).into_dyn()
//! );
//! ```
//!
//! Compute the path separately from the result
//! ```
//! # use ndarray_einsum_beta::*;
//! # use ndarray::prelude::*;
//! # let a: Array2<f64> = Array::range(0., 25., 1.)
//! #     .into_shape((5,5,)).unwrap();
//! # let b: Array1<f64> = Array::range(0., 5., 1.);
//! # let c: Array2<f64> = Array::range(0., 6., 1.)
//! #     .into_shape((2,3,)).unwrap();
//! # let d: Array2<f64> = Array::range(0., 12., 1.)
//! #     .into_shape((3,4,)).unwrap();
//! let path = einsum_path(
//!     "ij,jk->ik",
//!     &[&c, &d],
//!     OptimizationMethod::Naive
//! ).unwrap();
//! assert_eq!(
//!     path.contract_operands(&[&c, &d]),
//!     c.dot(&d).into_dyn()
//! );
//! ```
use ndarray::prelude::*;
use ndarray::{Data, IxDyn, LinalgScalar};

mod validation;
pub use validation::{
    validate, validate_and_optimize_order, validate_and_size, Contraction, SizedContraction,
};

mod optimizers;
pub use optimizers::{generate_optimized_order, ContractionOrder, OptimizationMethod};

mod contractors;
pub use contractors::{EinsumPath, EinsumPathSteps};
use contractors::{PairContractor, TensordotGeneral};

/// This trait is implemented for all `ArrayBase` variants and is parameterized by the data type.
///
/// It's here so `einsum` and the other functions accepting a list of operands
/// can take a slice `&[&dyn ArrayLike<A>]` where the elements of the slice can have
/// different numbers of dimensions and can be a mixture of `Array` and `ArrayView`.
pub trait ArrayLike<A> {
    fn into_dyn_view(&self) -> ArrayView<A, IxDyn>;
}

impl<A, S, D> ArrayLike<A> for ArrayBase<S, D>
where
    S: Data<Elem = A>,
    D: Dimension,
{
    fn into_dyn_view(&self) -> ArrayView<A, IxDyn> {
        self.view().into_dyn()
    }
}

/// Wrapper around [SizedContraction::contract_operands](struct.SizedContraction.html#method.contract_operands).
pub fn einsum_sc<A: LinalgScalar>(
    sized_contraction: &SizedContraction,
    operands: &[&dyn ArrayLike<A>],
) -> ArrayD<A> {
    sized_contraction.contract_operands(operands)
}

/// Create a [SizedContraction](struct.SizedContraction.html), optimize the contraction order, and compile the result into an [EinsumPath](struct.EinsumPath.html).
pub fn einsum_path<A>(
    input_string: &str,
    operands: &[&dyn ArrayLike<A>],
    optimization_strategy: OptimizationMethod,
) -> Result<EinsumPath<A>, &'static str> {
    let contraction_order =
        validate_and_optimize_order(input_string, operands, optimization_strategy)?;
    Ok(EinsumPath::from_path(&contraction_order))
}

/// Performs all steps of the process in one function: parse the string, compile the execution plan, and execute the contraction.
pub fn einsum<A: LinalgScalar>(
    input_string: &str,
    operands: &[&dyn ArrayLike<A>],
) -> Result<ArrayD<A>, &'static str> {
    let sized_contraction = validate_and_size(input_string, operands)?;
    Ok(einsum_sc(&sized_contraction, operands))
}

/// Compute tensor dot product between two tensors.
///
/// Similar to [the numpy function of the same name](https://docs.scipy.org/doc/numpy/reference/generated/numpy.tensordot.html).
/// Easiest to explain by showing the `einsum` equivalents:
///
/// ```
/// # use ndarray::prelude::*;
/// # use ndarray_einsum_beta::*;
/// let m1 = Array::range(0., (3*4*5*6) as f64, 1.)
///             .into_shape((3,4,5,6,))
///             .unwrap();
/// let m2 = Array::range(0., (4*5*6*7) as f64, 1.)
///             .into_shape((4,5,6,7))
///             .unwrap();
/// assert_eq!(
///     einsum(
///         "ijkl,jklm->im",
///         &[&m1, &m2]
///     ).unwrap(),
///     tensordot(
///         &m1,
///         &m2,
///         &[Axis(1), Axis(2), Axis(3)],
///         &[Axis(0), Axis(1), Axis(2)]
///     )
/// );
///
/// assert_eq!(
///     einsum(
///         "abic,dief->abcdef",
///         &[&m1, &m2]
///     ).unwrap(),
///     tensordot(
///         &m1,
///         &m2,
///         &[Axis(2)],
///         &[Axis(1)]
///     )
/// );
/// ```
pub fn tensordot<A, S, S2, D, E>(
    lhs: &ArrayBase<S, D>,
    rhs: &ArrayBase<S2, E>,
    lhs_axes: &[Axis],
    rhs_axes: &[Axis],
) -> ArrayD<A>
where
    A: ndarray::LinalgScalar,
    S: Data<Elem = A>,
    S2: Data<Elem = A>,
    D: Dimension,
    E: Dimension,
{
    assert_eq!(lhs_axes.len(), rhs_axes.len());
    let lhs_axes_copy: Vec<_> = lhs_axes.iter().map(|x| x.index()).collect();
    let rhs_axes_copy: Vec<_> = rhs_axes.iter().map(|x| x.index()).collect();
    let output_order: Vec<usize> = (0..(lhs.ndim() + rhs.ndim() - 2 * (lhs_axes.len()))).collect();
    let tensordotter = TensordotGeneral::from_shapes_and_axis_numbers(
        &lhs.shape(),
        &rhs.shape(),
        &lhs_axes_copy,
        &rhs_axes_copy,
        &output_order,
    );
    tensordotter.contract_pair(&lhs.view().into_dyn(), &rhs.view().into_dyn())
}