nanalogue 0.1.11

BAM/Mod BAM parsing and analysis tool with a single-molecule focus
Documentation 
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[
{
	"read_id": "5d10eb9a-aae1-4db8-8ec6-7ebb34d32575",
	"sequence_length": 8,
	"mapq": 255,
	"contig": "dummyI",
	"reference_start": 9,
	"reference_end": 17,
	"alignment_length": 8,
	"alignment_type": "primary_forward",
	"mod_count": "T+T:0;(probabilities >= 0.5020, PHRED base qual >= 0)"
},
{
	"read_id": "a4f36092-b4d5-47a9-813e-c22c3b477a0c",
	"sequence_length": 48,
	"mapq": 255,
	"contig": "dummyIII",
	"reference_start": 23,
	"reference_end": 71,
	"alignment_length": 48,
	"alignment_type": "primary_forward",
	"mod_count": "T+T:3;(probabilities >= 0.5020, PHRED base qual >= 0)"
},
{
	"read_id": "fffffff1-10d2-49cb-8ca3-e8d48979001b",
	"sequence_length": 33,
	"mapq": 255,
	"contig": "dummyII",
	"reference_start": 3,
	"reference_end": 36,
	"alignment_length": 33,
	"alignment_type": "primary_reverse",
	"mod_count": "T+T:1;(probabilities >= 0.5020, PHRED base qual >= 0)"
},
{
	"read_id": "a4f36092-b4d5-47a9-813e-c22c3b477a0c",
	"sequence_length": 48,
	"mapq": 0,
	"alignment_type": "unmapped",
	"mod_count": "G-7200:0;T+T:3;(probabilities >= 0.5020, PHRED base qual >= 0)"
}
]