molframe 0.5.2

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# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
rust-version = "1.98.1"
name = "molframe"
version = "0.5.2"
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "A batteries-included structural bioinformatics engine"
readme = "README.md"
license = "MIT"
repository = "https://github.com/miguelcsx/molframe"

[features]
adapters = [
    "dep:molframe-adapters",
    "molframe-engine/adapters",
]
analysis = [
    "spatial",
    "geometry",
    "chemistry",
    "dep:molframe-analysis",
    "dep:molframe-surface",
    "molframe-engine/analysis",
]
audit = [
    "analysis",
    "dep:molframe-audit",
    "molframe-engine/audit",
]
bcif = [
    "mmcif",
    "dep:molframe-bcif",
    "molframe-engine/bcif",
]
chemistry = [
    "dep:molframe-chem",
    "molframe-engine/chemistry",
]
compare = [
    "geometry",
    "chemistry",
    "sequence",
    "dep:molframe-compare",
    "molframe-engine/compare",
]
crystal = [
    "dep:molframe-xtal",
    "spatial",
    "molframe-engine/crystal",
]
default = [
    "mmcif",
    "pdb",
    "chemistry",
    "spatial",
]
full = [
    "mmcif",
    "bcif",
    "modelcif",
    "pdb",
    "geometry",
    "ic",
    "query",
    "spatial",
    "chemistry",
    "crystal",
    "surface",
    "analysis",
    "validation",
    "sequence",
    "compare",
    "trajectory",
    "audit",
    "motif",
    "adapters",
    "interop",
    "gzip",
    "zstd",
    "mmap",
]
geometry = [
    "dep:molframe-geom",
    "molframe-engine/geometry",
]
gzip = [
    "molframe-core/gzip",
    "molframe-engine/gzip",
]
ic = [
    "geometry",
    "dep:molframe-ic",
    "molframe-engine/ic",
]
interop = [
    "dep:molframe-interop",
    "molframe-engine/interop",
]
mmap = [
    "molframe-core/mmap",
    "molframe-engine/mmap",
]
mmcif = [
    "dep:molframe-cif",
    "molframe-engine/mmcif",
]
modelcif = [
    "mmcif",
    "dep:molframe-modelcif",
    "molframe-engine/modelcif",
]
motif = [
    "geometry",
    "chemistry",
    "dep:molframe-fx",
    "molframe-engine/motif",
]
pdb = [
    "dep:molframe-pdb",
    "molframe-engine/pdb",
]
query = [
    "dep:molframe-query",
    "molframe-engine/query",
]
sequence = [
    "dep:molframe-seq",
    "molframe-engine/sequence",
]
spatial = [
    "query",
    "dep:molframe-spatial",
    "molframe-engine/spatial",
]
surface = [
    "spatial",
    "dep:molframe-surface",
    "molframe-engine/surface",
]
trajectory = [
    "dep:molframe-traj",
    "molframe-engine/trajectory",
]
validation = [
    "spatial",
    "geometry",
    "chemistry",
    "dep:molframe-validate",
    "molframe-engine/validation",
]
zstd = [
    "molframe-core/zstd",
    "molframe-engine/zstd",
]

[lib]
name = "molframe"
path = "src/lib.rs"

[[test]]
name = "assembly_query"
path = "tests/assembly_query.rs"
required-features = ["full"]

[[test]]
name = "golden_tests"
path = "tests/golden_tests.rs"
required-features = ["full"]

[[test]]
name = "golden_workflows"
path = "tests/golden_workflows.rs"
required-features = ["full"]

[[test]]
name = "parity_ledger"
path = "tests/parity_ledger.rs"

[[bench]]
name = "facade"
path = "benches/facade.rs"
harness = false
required-features = ["full"]

[[bench]]
name = "golden"
path = "benches/golden.rs"
harness = false
required-features = ["full"]

[dependencies.molframe-adapters]
version = "0.5.2"
optional = true

[dependencies.molframe-analysis]
version = "0.5.2"
optional = true

[dependencies.molframe-audit]
version = "0.5.2"
optional = true

[dependencies.molframe-bcif]
version = "0.5.2"
optional = true

[dependencies.molframe-chem]
version = "0.5.2"
optional = true

[dependencies.molframe-cif]
version = "0.5.2"
optional = true

[dependencies.molframe-compare]
version = "0.5.2"
optional = true

[dependencies.molframe-core]
version = "0.5.2"

[dependencies.molframe-engine]
version = "0.5.2"

[dependencies.molframe-fx]
version = "0.5.2"
optional = true

[dependencies.molframe-geom]
version = "0.5.2"
optional = true

[dependencies.molframe-ic]
version = "0.5.2"
optional = true

[dependencies.molframe-interop]
version = "0.5.2"
optional = true

[dependencies.molframe-modelcif]
version = "0.5.2"
optional = true

[dependencies.molframe-pdb]
version = "0.5.2"
optional = true

[dependencies.molframe-query]
version = "0.5.2"
optional = true

[dependencies.molframe-seq]
version = "0.5.2"
optional = true

[dependencies.molframe-spatial]
version = "0.5.2"
optional = true

[dependencies.molframe-surface]
version = "0.5.2"
optional = true

[dependencies.molframe-traj]
version = "0.5.2"
optional = true

[dependencies.molframe-validate]
version = "0.5.2"
optional = true

[dependencies.molframe-xtal]
version = "0.5.2"
optional = true

[dependencies.serde]
version = "1"
features = ["derive"]

[dependencies.serde_json]
version = "1"

[dependencies.thiserror]
version = "2"

[dependencies.toml]
version = "0.9"

[dev-dependencies.criterion]
version = "0.5"
features = ["cargo_bench_support"]
default-features = false

[dev-dependencies.flate2]
version = "1"

[dev-dependencies.sha2]
version = "0.10"

[dev-dependencies.tempfile]
version = "3"

[lints.clippy]
cognitive_complexity = "warn"
manual_unwrap_or = "allow"
manual_unwrap_or_default = "allow"

[lints.clippy.pedantic]
level = "warn"
priority = -1

[lints.rust]
missing_debug_implementations = "warn"
missing_docs = "warn"