version = 4
[[package]]
name = "aho-corasick"
version = "1.1.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ddd31a130427c27518df266943a5308ed92d4b226cc639f5a8f1002816174301"
dependencies = [
"memchr",
]
[[package]]
name = "anstream"
version = "1.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "824a212faf96e9acacdbd09febd34438f8f711fb84e09a8916013cd7815ca28d"
dependencies = [
"anstyle",
"anstyle-parse",
"anstyle-query",
"anstyle-wincon",
"colorchoice",
"is_terminal_polyfill",
"utf8parse",
]
[[package]]
name = "anstyle"
version = "1.0.14"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "940b3a0ca603d1eade50a4846a2afffd5ef57a9feac2c0e2ec2e14f9ead76000"
[[package]]
name = "anstyle-parse"
version = "1.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "52ce7f38b242319f7cabaa6813055467063ecdc9d355bbb4ce0c68908cd8130e"
dependencies = [
"utf8parse",
]
[[package]]
name = "anstyle-query"
version = "1.1.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "40c48f72fd53cd289104fc64099abca73db4166ad86ea0b4341abe65af83dadc"
dependencies = [
"windows-sys",
]
[[package]]
name = "anstyle-wincon"
version = "3.0.11"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "291e6a250ff86cd4a820112fb8898808a366d8f9f58ce16d1f538353ad55747d"
dependencies = [
"anstyle",
"once_cell_polyfill",
"windows-sys",
]
[[package]]
name = "anyhow"
version = "1.0.104"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "330a5ed07fa54e4702c9d6c4174f74427fc0ef6e214bbd677ae50a5099946470"
[[package]]
name = "bindgen"
version = "0.72.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "993776b509cfb49c750f11b8f07a46fa23e0a1386ffc01fb1e7d343efc387895"
dependencies = [
"bitflags",
"cexpr",
"clang-sys",
"itertools",
"proc-macro2",
"quote",
"regex",
"rustc-hash",
"shlex 1.3.0",
"syn 2.0.119",
]
[[package]]
name = "bio-types"
version = "1.0.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f4dcf54f8b7f51450207d54780bab09c05f30b8b0caa991545082842e466ad7e"
dependencies = [
"derive-new 0.6.0",
"lazy_static",
"regex",
"strum_macros",
"thiserror 1.0.69",
]
[[package]]
name = "bitflags"
version = "2.13.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b588b76d00fde79687d7646a9b5bdf3cc0f655e0bbd080335a95d7e96f3587da"
[[package]]
name = "bumpalo"
version = "3.20.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "72f5acc6cb2ba439de613abc23857ec3d78374d8ed5ac84e9d11336e87da8649"
[[package]]
name = "byteorder"
version = "1.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1fd0f2584146f6f2ef48085050886acf353beff7305ebd1ae69500e27c67f64b"
[[package]]
name = "bzip2-sys"
version = "0.1.13+1.0.8"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "225bff33b2141874fe80d71e07d6eec4f85c5c216453dd96388240f96e1acc14"
dependencies = [
"cc",
"pkg-config",
]
[[package]]
name = "cc"
version = "1.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5add81bb678e6cb321aff7fa0dc7689ad82b112dbc032cea19f91d6b8e3582b9"
dependencies = [
"find-msvc-tools",
"jobserver",
"libc",
"shlex 2.0.1",
]
[[package]]
name = "cexpr"
version = "0.6.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6fac387a98bb7c37292057cffc56d62ecb629900026402633ae9160df93a8766"
dependencies = [
"nom",
]
[[package]]
name = "cfg-if"
version = "1.0.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9330f8b2ff13f34540b44e946ef35111825727b38d33286ef986142615121801"
[[package]]
name = "clang-sys"
version = "1.8.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0b023947811758c97c59bf9d1c188fd619ad4718dcaa767947df1cadb14f39f4"
dependencies = [
"glob",
"libc",
"libloading",
]
[[package]]
name = "clap"
version = "4.6.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d91e0c145792ef73a6ad36d27c75ac09f1832222a3c209689d90f534685ee5b7"
dependencies = [
"clap_builder",
"clap_derive",
]
[[package]]
name = "clap_builder"
version = "4.6.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f09628afdcc538b57f3c6341e9c8e9970f18e4a481690a64974d7023bd33548b"
dependencies = [
"anstream",
"anstyle",
"clap_lex",
"strsim",
]
[[package]]
name = "clap_derive"
version = "4.6.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d012d2b9d65aca7f18f4d9878a045bc17899bba951561ba5ec3c2ba1eed9a061"
dependencies = [
"heck",
"proc-macro2",
"quote",
"syn 3.0.3",
]
[[package]]
name = "clap_lex"
version = "1.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c8d4a3bb8b1e0c1050499d1815f5ab16d04f0959b233085fb31653fbfc9d98f9"
[[package]]
name = "cmake"
version = "0.1.58"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c0f78a02292a74a88ac736019ab962ece0bc380e3f977bf72e376c5d78ff0678"
dependencies = [
"cc",
]
[[package]]
name = "colorchoice"
version = "1.0.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1d07550c9036bf2ae0c684c4297d503f838287c83c53686d05370d0e139ae570"
[[package]]
name = "console"
version = "0.16.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4fe5f465a4f6fee88fad41b85d990f84c835335e85b5d9e6e63e0d06d28cba7c"
dependencies = [
"encode_unicode",
"libc",
"unicode-width",
"windows-sys",
]
[[package]]
name = "crossbeam"
version = "0.8.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1137cd7e7fc0fb5d3c5a8678be38ec56e819125d8d7907411fe24ccb943faca8"
dependencies = [
"crossbeam-channel",
"crossbeam-deque",
"crossbeam-epoch",
"crossbeam-queue",
"crossbeam-utils",
]
[[package]]
name = "crossbeam-channel"
version = "0.5.16"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d85363c37faeca707aef026efa9f3b34d077bce547e48f770770625c6013679e"
dependencies = [
"crossbeam-utils",
]
[[package]]
name = "crossbeam-deque"
version = "0.8.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5181e0de7b61eb03a81e347d6dd8797bae9da5146707b51077e2d71a54ec0ceb"
dependencies = [
"crossbeam-epoch",
"crossbeam-utils",
]
[[package]]
name = "crossbeam-epoch"
version = "0.9.20"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2d6914041f254d6e9176c01941b21115dcfb7089e55135a35411081bd106ef3f"
dependencies = [
"crossbeam-utils",
]
[[package]]
name = "crossbeam-queue"
version = "0.3.13"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "803d13fb3b09d88be9f4dbc29062c66b19bf7170867ceb746d2a8689bf6c7a26"
dependencies = [
"crossbeam-utils",
]
[[package]]
name = "crossbeam-utils"
version = "0.8.22"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "61803da095bee82a81bb1a452ecc25d3b2f1416d1897eb86430c6159ef717c17"
[[package]]
name = "curl-sys"
version = "0.4.90+curl-8.21.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "97799a0d220bfb3361e0fe4936966ff8c4b24d65c3f06dfc70d7b680b44e7897"
dependencies = [
"cc",
"libc",
"libz-sys",
"openssl-sys",
"pkg-config",
"vcpkg",
"windows-sys",
]
[[package]]
name = "custom_derive"
version = "0.1.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ef8ae57c4978a2acd8b869ce6b9ca1dfe817bff704c220209fdef2c0b75a01b9"
[[package]]
name = "derive-new"
version = "0.6.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d150dea618e920167e5973d70ae6ece4385b7164e0d799fe7c122dd0a5d912ad"
dependencies = [
"proc-macro2",
"quote",
"syn 2.0.119",
]
[[package]]
name = "derive-new"
version = "0.7.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2cdc8d50f426189eef89dac62fabfa0abb27d5cc008f25bf4156a0203325becc"
dependencies = [
"proc-macro2",
"quote",
"syn 2.0.119",
]
[[package]]
name = "displaydoc"
version = "0.2.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c6232dd377dcc64799954cbd3a9bb882e9cdc1308ccd87b1c098f1fb2eaf82a8"
dependencies = [
"proc-macro2",
"quote",
"syn 3.0.3",
]
[[package]]
name = "either"
version = "1.17.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9e5e8f6c15a24b9a3ee5efec809ccd006d3b30e8b3bb63c39af737c7f87daa1d"
[[package]]
name = "encode_unicode"
version = "1.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "34aa73646ffb006b8f5147f3dc182bd4bcb190227ce861fc4a4844bf8e3cb2c0"
[[package]]
name = "find-msvc-tools"
version = "0.1.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5baebc0774151f905a1a2cc41989300b1e6fbb29aff0ceffa1064fdd3088d582"
[[package]]
name = "form_urlencoded"
version = "1.2.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "cb4cb245038516f5f85277875cdaa4f7d2c9a0fa0468de06ed190163b1581fcf"
dependencies = [
"percent-encoding",
]
[[package]]
name = "fs-utils"
version = "1.1.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6fc7a9dc005c944c98a935e7fd626faf5bf7e5a609f94bc13e42fc4a02e52593"
dependencies = [
"quick-error",
]
[[package]]
name = "futures-core"
version = "0.3.33"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2cd50c473c80f6d7c3670a752354b8e569b1a7cbfdc0419ec88e5edad85e0dc7"
[[package]]
name = "futures-task"
version = "0.3.33"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b231ed28831efb4a61a08580c4bc233ec56bc009f4cd8f52da2c3cb97df0c109"
[[package]]
name = "futures-util"
version = "0.3.33"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a77a90a256fce34da66415271e30f94ee91c57b04b8a2c042d9cf3220179deaa"
dependencies = [
"futures-core",
"futures-task",
"pin-project-lite",
"slab",
]
[[package]]
name = "getrandom"
version = "0.4.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "300e883d756b2e4ec94e02791f39b04b522276138852cfc41d9fb7e904106099"
dependencies = [
"cfg-if",
"libc",
"r-efi",
]
[[package]]
name = "glob"
version = "0.3.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e4eba85ea1d0a966a983acd07deee566e67395d2d96b6fb39e62b5a833f1eb0b"
[[package]]
name = "heck"
version = "0.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2304e00983f87ffb38b55b444b5e3b60a884b5d30c0fca7d82fe33449bbe55ea"
[[package]]
name = "hermit-abi"
version = "0.5.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fc0fef456e4baa96da950455cd02c081ca953b141298e41db3fc7e36b1da849c"
[[package]]
name = "hts-sys"
version = "2.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fc7e68eb880b02c80cfb41e8dc7904062a3ea7e27b7c4556e88d648dd2f038da"
dependencies = [
"bindgen",
"bzip2-sys",
"cc",
"curl-sys",
"fs-utils",
"glob",
"libz-sys",
"lzma-sys",
"openssl-sys",
]
[[package]]
name = "icu_collections"
version = "2.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2984d1cd16c883d7935b9e07e44071dca8d917fd52ecc02c04d5fa0b5a3f191c"
dependencies = [
"displaydoc",
"potential_utf",
"utf8_iter",
"yoke",
"zerofrom",
"zerovec",
]
[[package]]
name = "icu_locale_core"
version = "2.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "92219b62b3e2b4d88ac5119f8904c10f8f61bf7e95b640d25ba3075e6cac2c29"
dependencies = [
"displaydoc",
"litemap",
"tinystr",
"writeable",
"zerovec",
]
[[package]]
name = "icu_normalizer"
version = "2.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c56e5ee99d6e3d33bd91c5d85458b6005a22140021cc324cea84dd0e72cff3b4"
dependencies = [
"icu_collections",
"icu_normalizer_data",
"icu_properties",
"icu_provider",
"smallvec",
"zerovec",
]
[[package]]
name = "icu_normalizer_data"
version = "2.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "da3be0ae77ea334f4da67c12f149704f19f81d1adf7c51cf482943e84a2bad38"
[[package]]
name = "icu_properties"
version = "2.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bee3b67d0ea5c2cca5003417989af8996f8604e34fb9ddf96208a033901e70de"
dependencies = [
"icu_collections",
"icu_locale_core",
"icu_properties_data",
"icu_provider",
"zerotrie",
"zerovec",
]
[[package]]
name = "icu_properties_data"
version = "2.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8e2bbb201e0c04f7b4b3e14382af113e17ba4f63e2c9d2ee626b720cbce54a14"
[[package]]
name = "icu_provider"
version = "2.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "139c4cf31c8b5f33d7e199446eff9c1e02decfc2f0eec2c8d71f65befa45b421"
dependencies = [
"displaydoc",
"icu_locale_core",
"writeable",
"yoke",
"zerofrom",
"zerotrie",
"zerovec",
]
[[package]]
name = "idna"
version = "1.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3b0875f23caa03898994f6ddc501886a45c7d3d62d04d2d90788d47be1b1e4de"
dependencies = [
"idna_adapter",
"smallvec",
"utf8_iter",
]
[[package]]
name = "idna_adapter"
version = "1.2.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "cb68373c0d6620ef8105e855e7745e18b0d00d3bdb07fb532e434244cdb9a714"
dependencies = [
"icu_normalizer",
"icu_properties",
]
[[package]]
name = "ieee754"
version = "0.2.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9007da9cacbd3e6343da136e98b0d2df013f553d35bdec8b518f07bea768e19c"
[[package]]
name = "indicatif"
version = "0.18.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9433806cd6b4ec1aba79c021c7e4c58fb4c3b9977c085062e611ac929998fb0c"
dependencies = [
"console",
"portable-atomic",
"unicode-width",
"unit-prefix",
"web-time",
]
[[package]]
name = "is_terminal_polyfill"
version = "1.70.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a6cb138bb79a146c1bd460005623e142ef0181e3d0219cb493e02f7d08a35695"
[[package]]
name = "itertools"
version = "0.13.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "413ee7dfc52ee1a4949ceeb7dbc8a33f2d6c088194d9f922fb8318faf1f01186"
dependencies = [
"either",
]
[[package]]
name = "jobserver"
version = "0.1.35"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1c00acbd29eabad4a2392fa0e921c874934dbbf4194312ad20f04a0ed67a3cb3"
dependencies = [
"getrandom",
"libc",
]
[[package]]
name = "js-sys"
version = "0.3.103"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "53b44bfcdb3f8d5837a46dae1ca9660a837176eee74a28b229bc626816589102"
dependencies = [
"cfg-if",
"futures-util",
"wasm-bindgen",
]
[[package]]
name = "lazy_static"
version = "1.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bbd2bcb4c963f2ddae06a2efc7e9f3591312473c50c6685e1f298068316e66fe"
[[package]]
name = "libc"
version = "0.2.189"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3eaf3ede3fee6db1a4c2ee091bf8a8b4dccdc6d17f656fb07896ee72867612f2"
[[package]]
name = "libloading"
version = "0.8.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d7c4b02199fee7c5d21a5ae7d8cfa79a6ef5bb2fc834d6e9058e89c825efdc55"
dependencies = [
"cfg-if",
"windows-link",
]
[[package]]
name = "libz-sys"
version = "1.1.29"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "85bc9657773828b90eeb625adff10eeac83cc21bbfd8e23a03eaa8a33c9e28d9"
dependencies = [
"cc",
"cmake",
"libc",
"pkg-config",
"vcpkg",
]
[[package]]
name = "linear-map"
version = "1.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bfae20f6b19ad527b550c223fddc3077a547fc70cda94b9b566575423fd303ee"
[[package]]
name = "litemap"
version = "0.8.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "92daf443525c4cce67b150400bc2316076100ce0b3686209eb8cf3c31612e6f0"
[[package]]
name = "lzma-sys"
version = "0.1.20"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5fda04ab3764e6cde78b9974eec4f779acaba7c4e84b36eca3cf77c581b85d27"
dependencies = [
"cc",
"libc",
"pkg-config",
]
[[package]]
name = "md_analysis"
version = "0.2.1"
dependencies = [
"anyhow",
"clap",
"crossbeam",
"indicatif",
"num_cpus",
"rust-htslib",
"tracing",
]
[[package]]
name = "memchr"
version = "2.8.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "cf8baf1c55e62ffcace7a9f06f4bd9cd3f0c4beb022d3b367256b91b87513d98"
[[package]]
name = "minimal-lexical"
version = "0.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "68354c5c6bd36d73ff3feceb05efa59b6acb7626617f4962be322a825e61f79a"
[[package]]
name = "newtype_derive"
version = "0.1.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ac8cd24d9f185bb7223958d8c1ff7a961b74b1953fd05dba7cc568a63b3861ec"
dependencies = [
"rustc_version",
]
[[package]]
name = "nom"
version = "7.1.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d273983c5a657a70a3e8f2a01329822f3b8c8172b73826411a55751e404a0a4a"
dependencies = [
"memchr",
"minimal-lexical",
]
[[package]]
name = "num_cpus"
version = "1.17.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "91df4bbde75afed763b708b7eee1e8e7651e02d97f6d5dd763e89367e957b23b"
dependencies = [
"hermit-abi",
"libc",
]
[[package]]
name = "once_cell"
version = "1.21.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9f7c3e4beb33f85d45ae3e3a1792185706c8e16d043238c593331cc7cd313b50"
[[package]]
name = "once_cell_polyfill"
version = "1.70.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "384b8ab6d37215f3c5301a95a4accb5d64aa607f1fcb26a11b5303878451b4fe"
[[package]]
name = "openssl-src"
version = "300.6.1+3.6.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "46eb8fb9fb3b61ce1c0f8a026c4c1a0714d3a9e138e7fbde78753ce2babc3846"
dependencies = [
"cc",
]
[[package]]
name = "openssl-sys"
version = "0.9.117"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b47e7e6bb2c38cd930d25a23b40fa52e068c10e85f3e03a7f5ba5aaca5713695"
dependencies = [
"cc",
"libc",
"openssl-src",
"pkg-config",
"vcpkg",
]
[[package]]
name = "percent-encoding"
version = "2.3.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9b4f627cb1b25917193a259e49bdad08f671f8d9708acfd5fe0a8c1455d87220"
[[package]]
name = "pin-project-lite"
version = "0.2.17"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a89322df9ebe1c1578d689c92318e070967d1042b512afbe49518723f4e6d5cd"
[[package]]
name = "pkg-config"
version = "0.3.33"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "19f132c84eca552bf34cab8ec81f1c1dcc229b811638f9d283dceabe58c5569e"
[[package]]
name = "portable-atomic"
version = "1.14.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3d20d5497ef88037a52ff98267d066e7f11fcc5e99bbfbd58a42336193aacec3"
[[package]]
name = "potential_utf"
version = "0.1.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0103b1cef7ec0cf76490e969665504990193874ea05c85ff9bab8b911d0a0564"
dependencies = [
"zerovec",
]
[[package]]
name = "proc-macro2"
version = "1.0.107"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "985e7ec9bb745e6ce6535b544d84d6cd6f7ad8bd711c398938ae983b91a766d9"
dependencies = [
"unicode-ident",
]
[[package]]
name = "quick-error"
version = "1.2.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a1d01941d82fa2ab50be1e79e6714289dd7cde78eba4c074bc5a4374f650dfe0"
[[package]]
name = "quote"
version = "1.0.47"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1fbf4db142a473a8d80c26bbf18454ed458bf8d26c8219c331daecfdbd079001"
dependencies = [
"proc-macro2",
]
[[package]]
name = "r-efi"
version = "6.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f8dcc9c7d52a811697d2151c701e0d08956f92b0e24136cf4cf27b57a6a0d9bf"
[[package]]
name = "regex"
version = "1.13.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f020237b6c8eed93db2e2cb53c00c60a8e1bc73da7d073199a1180401450218d"
dependencies = [
"aho-corasick",
"memchr",
"regex-automata",
"regex-syntax",
]
[[package]]
name = "regex-automata"
version = "0.4.16"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8fcfdb36bda0c880c5931cdc7a2bcdc8ba4556847b9d912bca70bc94708711ad"
dependencies = [
"aho-corasick",
"memchr",
"regex-syntax",
]
[[package]]
name = "regex-syntax"
version = "0.8.11"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d6f6ff9a378485b298a5286656da665ba74413d36db0979633275d2e708145d4"
[[package]]
name = "rust-htslib"
version = "1.0.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2386a28563a1c0713d7901e5c6e07732ca46a844ec8ee08cd17c631e581988ad"
dependencies = [
"bio-types",
"byteorder",
"custom_derive",
"derive-new 0.7.0",
"hts-sys",
"ieee754",
"lazy_static",
"libc",
"libz-sys",
"linear-map",
"newtype_derive",
"regex",
"thiserror 2.0.19",
"url",
]
[[package]]
name = "rustc-hash"
version = "2.1.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6b1e7f9a428571be2dc5bc0505c13fb6bf936822b894ec87abf8a08a4e51742d"
[[package]]
name = "rustc_version"
version = "0.1.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c5f5376ea5e30ce23c03eb77cbe4962b988deead10910c372b226388b594c084"
dependencies = [
"semver",
]
[[package]]
name = "rustversion"
version = "1.0.23"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "cf54715a573b99ac80df0bc206da022bcd442c974952c7b9720069370852e21f"
[[package]]
name = "semver"
version = "0.1.20"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d4f410fedcf71af0345d7607d246e7ad15faaadd49d240ee3b24e5dc21a820ac"
[[package]]
name = "serde"
version = "1.0.229"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4148590afebada386688f18773da617792bf2ef03ffc1e4cbd2b1d45b023e0ba"
dependencies = [
"serde_core",
]
[[package]]
name = "serde_core"
version = "1.0.229"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "67dca2c9c51e58a4791a4b1ed58308b39c64224d349a935ab5039aa360942a48"
dependencies = [
"serde_derive",
]
[[package]]
name = "serde_derive"
version = "1.0.229"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e7a5d71263a5a7d47b41f6b3f06ba276f10cc18b0931f1799f710578e2309348"
dependencies = [
"proc-macro2",
"quote",
"syn 3.0.3",
]
[[package]]
name = "shlex"
version = "1.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0fda2ff0d084019ba4d7c6f371c95d8fd75ce3524c3cb8fb653a3023f6323e64"
[[package]]
name = "shlex"
version = "2.0.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f8fadd59c855ef2080decdef8ff161eb6661b86933c9d82e5ba29dc602a55aba"
[[package]]
name = "slab"
version = "0.4.12"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0c790de23124f9ab44544d7ac05d60440adc586479ce501c1d6d7da3cd8c9cf5"
[[package]]
name = "smallvec"
version = "1.15.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8ed6a63f02c8539c91a8685a86f4099661ba3da017932f6ebbea6de3f0fa7c90"
[[package]]
name = "stable_deref_trait"
version = "1.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6ce2be8dc25455e1f91df71bfa12ad37d7af1092ae736f3a6cd0e37bc7810596"
[[package]]
name = "strsim"
version = "0.11.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7da8b5736845d9f2fcb837ea5d9e2628564b3b043a70948a3f0b778838c5fb4f"
[[package]]
name = "strum_macros"
version = "0.26.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4c6bee85a5a24955dc440386795aa378cd9cf82acd5f764469152d2270e581be"
dependencies = [
"heck",
"proc-macro2",
"quote",
"rustversion",
"syn 2.0.119",
]
[[package]]
name = "syn"
version = "2.0.119"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "872831b642d1a07999a962a351ed35b955ea2cfc8f3862091e2a240a84f17297"
dependencies = [
"proc-macro2",
"quote",
"unicode-ident",
]
[[package]]
name = "syn"
version = "3.0.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "53e9bae58849f64dfa4f5d5ae372c8341f7305f82a3868709269343628b659a3"
dependencies = [
"proc-macro2",
"quote",
"unicode-ident",
]
[[package]]
name = "synstructure"
version = "0.13.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "728a70f3dbaf5bab7f0c4b1ac8d7ae5ea60a4b5549c8a5914361c99147a709d2"
dependencies = [
"proc-macro2",
"quote",
"syn 2.0.119",
]
[[package]]
name = "thiserror"
version = "1.0.69"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b6aaf5339b578ea85b50e080feb250a3e8ae8cfcdff9a461c9ec2904bc923f52"
dependencies = [
"thiserror-impl 1.0.69",
]
[[package]]
name = "thiserror"
version = "2.0.19"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "09a43598840e33d5b0331f38c5e30d13bb11c11210a4b58f0d9b18a5a5eefcd9"
dependencies = [
"thiserror-impl 2.0.19",
]
[[package]]
name = "thiserror-impl"
version = "1.0.69"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4fee6c4efc90059e10f81e6d42c60a18f76588c3d74cb83a0b242a2b6c7504c1"
dependencies = [
"proc-macro2",
"quote",
"syn 2.0.119",
]
[[package]]
name = "thiserror-impl"
version = "2.0.19"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "43cbfe0cf76104d42a574802844187e84a305e531ed54455f11fbde0f10541cd"
dependencies = [
"proc-macro2",
"quote",
"syn 3.0.3",
]
[[package]]
name = "tinystr"
version = "0.8.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c8323304221c2a851516f22236c5722a72eaa19749016521d6dff0824447d96d"
dependencies = [
"displaydoc",
"zerovec",
]
[[package]]
name = "tracing"
version = "0.1.44"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "63e71662fa4b2a2c3a26f570f037eb95bb1f85397f3cd8076caed2f026a6d100"
dependencies = [
"pin-project-lite",
"tracing-attributes",
"tracing-core",
]
[[package]]
name = "tracing-attributes"
version = "0.1.31"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7490cfa5ec963746568740651ac6781f701c9c5ea257c58e057f3ba8cf69e8da"
dependencies = [
"proc-macro2",
"quote",
"syn 2.0.119",
]
[[package]]
name = "tracing-core"
version = "0.1.36"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "db97caf9d906fbde555dd62fa95ddba9eecfd14cb388e4f491a66d74cd5fb79a"
dependencies = [
"once_cell",
]
[[package]]
name = "unicode-ident"
version = "1.0.24"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e6e4313cd5fcd3dad5cafa179702e2b244f760991f45397d14d4ebf38247da75"
[[package]]
name = "unicode-width"
version = "0.2.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b4ac048d71ede7ee76d585517add45da530660ef4390e49b098733c6e897f254"
[[package]]
name = "unit-prefix"
version = "0.5.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "81e544489bf3d8ef66c953931f56617f423cd4b5494be343d9b9d3dda037b9a3"
[[package]]
name = "url"
version = "2.5.8"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ff67a8a4397373c3ef660812acab3268222035010ab8680ec4215f38ba3d0eed"
dependencies = [
"form_urlencoded",
"idna",
"percent-encoding",
"serde",
]
[[package]]
name = "utf8_iter"
version = "1.0.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b6c140620e7ffbb22c2dee59cafe6084a59b5ffc27a8859a5f0d494b5d52b6be"
[[package]]
name = "utf8parse"
version = "0.2.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "06abde3611657adf66d383f00b093d7faecc7fa57071cce2578660c9f1010821"
[[package]]
name = "vcpkg"
version = "0.2.15"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "accd4ea62f7bb7a82fe23066fb0957d48ef677f6eeb8215f372f52e48bb32426"
[[package]]
name = "wasm-bindgen"
version = "0.2.126"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4b067c0c11094aef6b7a801c1e34a26affafdf3d051dba08456b868789aaf9a4"
dependencies = [
"cfg-if",
"once_cell",
"rustversion",
"wasm-bindgen-macro",
"wasm-bindgen-shared",
]
[[package]]
name = "wasm-bindgen-macro"
version = "0.2.126"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "167ce5e579f6bcf889c4f7175a8a5a585de84e8ff93976ce393efa5f2837aab1"
dependencies = [
"quote",
"wasm-bindgen-macro-support",
]
[[package]]
name = "wasm-bindgen-macro-support"
version = "0.2.126"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f3997c7839262f4ef12cf90b818d6340c18e80f263f1a94bf157d0ec4420380e"
dependencies = [
"bumpalo",
"proc-macro2",
"quote",
"syn 2.0.119",
"wasm-bindgen-shared",
]
[[package]]
name = "wasm-bindgen-shared"
version = "0.2.126"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "dc1b4cb0cc549fcf58d7dfc081778139b3d283a081644e833e84682ad71cea24"
dependencies = [
"unicode-ident",
]
[[package]]
name = "web-time"
version = "1.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5a6580f308b1fad9207618087a65c04e7a10bc77e02c8e84e9b00dd4b12fa0bb"
dependencies = [
"js-sys",
"wasm-bindgen",
]
[[package]]
name = "windows-link"
version = "0.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f0805222e57f7521d6a62e36fa9163bc891acd422f971defe97d64e70d0a4fe5"
[[package]]
name = "windows-sys"
version = "0.61.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ae137229bcbd6cdf0f7b80a31df61766145077ddf49416a728b02cb3921ff3fc"
dependencies = [
"windows-link",
]
[[package]]
name = "writeable"
version = "0.6.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1ffae5123b2d3fc086436f8834ae3ab053a283cfac8fe0a0b8eaae044768a4c4"
[[package]]
name = "yoke"
version = "0.8.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "709fe23a0424b6a435d82152b1bd3fdfb0833487d5fa90d05d42762a9891fef5"
dependencies = [
"stable_deref_trait",
"yoke-derive",
"zerofrom",
]
[[package]]
name = "yoke-derive"
version = "0.8.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "de844c262c8848816172cef550288e7dc6c7b7814b4ee56b3e1553f275f1858e"
dependencies = [
"proc-macro2",
"quote",
"syn 2.0.119",
"synstructure",
]
[[package]]
name = "zerofrom"
version = "0.1.8"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0ec05a11813ea801ff6d75110ad09cd0824ddba17dfe17128ea0d5f68e6c5272"
dependencies = [
"zerofrom-derive",
]
[[package]]
name = "zerofrom-derive"
version = "0.1.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "11532158c46691caf0f2593ea8358fed6bbf68a0315e80aae9bd41fbade684a1"
dependencies = [
"proc-macro2",
"quote",
"syn 2.0.119",
"synstructure",
]
[[package]]
name = "zerotrie"
version = "0.2.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0f9152d31db0792fa83f70fb2f83148effb5c1f5b8c7686c3459e361d9bc20bf"
dependencies = [
"displaydoc",
"yoke",
"zerofrom",
]
[[package]]
name = "zerovec"
version = "0.11.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "90f911cbc359ab6af17377d242225f4d75119aec87ea711a880987b18cd7b239"
dependencies = [
"yoke",
"zerofrom",
"zerovec-derive",
]
[[package]]
name = "zerovec-derive"
version = "0.11.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "625dc425cab0dca6dc3c3319506e6593dcb08a9f387ea3b284dbd52a92c40555"
dependencies = [
"proc-macro2",
"quote",
"syn 2.0.119",
]