manifold-codec 1.6.0

Lossless RGB8 shared-patch atlas image codecs (MNF5/MNF6/MNF7/MNF8)
Documentation
# docs/ — study and specification index

Normative and study documents for the MNF formats. Every measured claim
points at its producing record; `docs/science.md` maps the underlying
principles (information theory, coding theory, MDL) to the mechanisms.

## Specifications (normative)

- [format.md]format.md — MNF5/MNF6/MNF7 bitstream specs + freeze stamp;
  MNF8 extension described in the crate docs (`src/mnf8.rs`) and
  [ADR-002]adr-002-entropy-backends.md.
- [adr-001-color-transform.md]adr-001-color-transform.md — MNF7 color-domain
  residuals decision record.
- [adr-002-entropy-backends.md]adr-002-entropy-backends.md — MNF8 backend
  field + profiles decision record.
- [mnf8-adr-003-tokens.md]mnf8-adr-003-tokens.md — MNF8 FLAG_TOKENS
  (LZ77-2D token payload over the MED plane) decision record.

## Measurements (canonical numbers)

- [benchmarks.md]benchmarks.md — lossless comparison tables (PNG/JXL/WebP
  columns), held-out corpus.
- [atlas-eval-v12.md]atlas-eval-v12.md — encoder arm ablation (MED, atlas,
  D8, planar at coder parity).
- [entropy-backends-v13.md]entropy-backends-v13.md — backend matrix at
  frozen-stream parity (zlib/zstd/brotli/xz).
- [subspace-v01.md]subspace-v01.md — PCA/MDL subspace study (FAIL gate).
- [photo-gate-v122.md]photo-gate-v122.md — photographic corpus gate.

## Research records (2026-10-27 probe program)

Six geometry-family denials + one engine retention, all measured with
metadata counted and exact reconstruction asserted:

- [riemannian-traversal-probe.md]riemannian-traversal-probe.md — metric-guided
  scan order (DENIED; also the metric-warp predictor postscript).
- [shear-refs-format-probe.md]shear-refs-format-probe.md — D8+10-shear MNF8
  flag candidate implemented and reverted at the 30/30 gate.
- [ternary-residuals-probe.md]ternary-residuals-probe.md — balanced-ternary
  digit splits on prediction residuals (first-cost analysis).
- [research-paper-validation.md]research-paper-validation.md — published
  compression claims vs manifold measurements (per-claim verdicts).
- [mnf8-riemann-conformal-probe.md]mnf8-riemann-conformal-probe.md — conformal
  square→disk guidance (analytic no-op) + anisotropic orientation tiebreak
  (single-class candidate).
- [riemann-array-v05-probe.md]riemann-array-v05-probe.md — shear-wrap torus
  prediction (1/W lever; 0/30 corpus wins).
- [periodic-prediction-v06-probe.md]periodic-prediction-v06-probe.md — periodic
  structure prediction (25/30 corpus wins, −8.92%; mechanism split T=1 vs true T;
  coefficient hybrid denied).
- [webp-hybrid-probe.md]webp-hybrid-probe.md — WebP-style predictors on the
  MNF8 coder (DENIED) + the fair corpora comparison table.
- [mnf9-engine-ladder-probe.md]mnf9-engine-ladder-probe.md — the ladder:
  LZ77-2D token engine RETAINED rate-aware; matrix-matching arms DENIED.
- [mnf9-token-arm.md]mnf9-token-arm.md — the retained arm ported to Rust
  (`crates/mnf-mans`): real decoder, 30-file corpus gate, 5/30 token wins
  reproducing the ladder numbers.

Earlier research notes: [v07-charts-replication.md](v07-charts-replication.md),
[cy01-torus.md](cy01-torus.md), [dimensional-fold-probe.md](dimensional-fold-probe.md),
[cryoem-plan.md](cryoem-plan.md), [eer-probe-10061-10943.md](eer-probe-10061-10943.md),
[riemannian-review.md](riemannian-review.md).

## Communication

- [science.md]science.md — the principles document: information theory,
  coding theory, MDL, and the measured research principles (§11).
- [announcement-draft.md]announcement-draft.md — approved announcement
  numbers draft (in-repo, soaking).

## Audits

- [audit-crate-131.md]audit-crate-131.md — published-crate audit (v1.3.1).
- [audit-2026-10-25.md]audit-2026-10-25.md — full-repo technical audit.