lightmotif 0.10.1

A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
Documentation
use std::ops::AddAssign;

use generic_array::ArrayLength;

use crate::abc::Alphabet;
use crate::dense::MatrixElement;
use crate::num::StrictlyPositive;
use crate::num::U1;
use crate::pli::Encode;
use crate::pli::Maximum;
use crate::pli::Score;
use crate::pli::Stripe;
use crate::pli::Threshold;

use super::Backend;

/// A marker type for the generic implementation of the pipeline.
#[derive(Clone, Debug, Default)]
pub struct Generic;

impl Backend for Generic {
    type Lanes = U1;
}

impl<A: Alphabet> Encode<A> for Generic {}

impl<T: MatrixElement + AddAssign, A: Alphabet, C: StrictlyPositive + ArrayLength> Score<T, A, C>
    for Generic
{
}

impl<T: MatrixElement + PartialOrd, C: StrictlyPositive + ArrayLength> Maximum<T, C> for Generic {}

impl<A: Alphabet, C: StrictlyPositive + ArrayLength> Stripe<A, C> for Generic {}

impl<T: MatrixElement + PartialOrd, C: StrictlyPositive + ArrayLength> Threshold<T, C> for Generic {}