liblrge 0.3.0

Genome size estimation from long read overlaps
Documentation 
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
rust-version = "1.88.0"
name = "liblrge"
version = "0.3.0"
authors = ["Michael Hall <michael@mbh.sh>"]
build = false
exclude = ["paper/*"]
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Genome size estimation from long read overlaps"
homepage = "https://github.com/mbhall88/lrge"
documentation = "https://docs.rs/liblrge"
readme = "README.md"
keywords = [
    "bioinformatics",
    "long-reads",
    "overlaps",
    "estimation",
    "genome-size",
]
license-file = "LICENSE"
repository = "https://github.com/mbhall88/lrge"

[features]
alignment = [
    "noodles",
    "noodles-util",
]
compression = [
    "gzip",
    "zstd",
    "bzip2",
    "xz",
]
default = [
    "compression",
    "alignment",
]
gzip = ["flate2"]
xz = ["liblzma"]

[lib]
name = "liblrge"
path = "src/lib.rs"

[dependencies.bzip2]
version = "0.6.1"
optional = true

[dependencies.crossbeam-channel]
version = "0.5.15"

[dependencies.csv]
version = "1.3.1"

[dependencies.flate2]
version = "1.0.34"
optional = true
package = "flate2"

[dependencies.libc]
version = "0.2.164"

[dependencies.liblzma]
version = "0.4.5"
optional = true
package = "liblzma"

[dependencies.log]
version = "0.4.25"

[dependencies.minimap2-sys]
version = "0.1.30"

[dependencies.needletail]
version = "0.6.0"
default-features = false

[dependencies.noodles]
version = "0.109.0"
features = [
    "bam",
    "cram",
    "core",
    "sam",
]
optional = true

[dependencies.noodles-util]
version = "0.78.0"
features = ["alignment"]
optional = true

[dependencies.rand]
version = "0.9"

[dependencies.rayon]
version = "1.10.0"

[dependencies.serde]
version = "1.0.215"
features = ["derive"]

[dependencies.zstd]
version = "0.13.2"
optional = true

[dev-dependencies.env_logger]
version = "0.11.5"

[dev-dependencies.tempfile]
version = "3.10.1"