# ---------- Dockerfile ----------
FROM condaforge/miniforge3:latest
# Add Bioconda channel (conda-forge is already the highest-priority channel)
RUN conda config --add channels bioconda && \
conda install -y pbccs && \
# remove package caches & unused index data (saves ~250 MB)
conda clean -afy
# If you prefer micromamba over conda, comment out the three lines above
# and substitute: `mamba install -y pbccs=${PBCCS_VER}`
# Default command when the container is run
ENTRYPOINT ["ccs"]