imc-rs 0.1.6

Library for reading imaging mass cytometry (IMC) data. Supports the .mcd format.
Documentation

This library provides a means of accessing imaging mass cytometry (Fluidigm) data stored in the (*.mcd) format.

Example

To run this example, make sure to first download the test file 20200612_FLU_1923.mcd to the test/ folder.

extern crate imc_rs;

use imc_rs::MCD;
use std::io::BufReader;
use std::fs::File;

fn main() {
let filename = "../test/20200612_FLU_1923.mcd";

let mcd = MCD::from_path(filename).unwrap();

// Optionally we can load/create the .dcm file for fast access to images
let mcd = mcd.with_dcm().unwrap();

}