1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582
//! # ⚠️ WARNING 🚧 API unstable ⚒️ and still in development 👷
//! Rust version of [hyperbee](https://github.com/holepunchto/hyperbee)
//! A B-tree built on top of Hypercore.
mod messages {
include!(concat!(env!("OUT_DIR"), "/_.rs"));
}
mod blocks;
mod changes;
mod del;
mod error;
mod keys;
mod prefixed;
mod put;
mod test;
pub mod traverse;
mod tree;
use std::{
fmt::Debug,
ops::{Range, RangeBounds},
path::Path,
sync::Arc,
};
use derive_builder::Builder;
use hypercore::AppendOutcome;
use prost::{bytes::Buf, DecodeError, Message};
use random_access_storage::RandomAccess;
use tokio::sync::RwLock;
use tracing::trace;
use blocks::Blocks;
use error::HyperbeeError;
use messages::{header::Metadata, yolo_index, YoloIndex};
use traverse::{Traverse, TraverseConfig};
use tree::Tree;
pub use prefixed::Prefixed;
pub trait CoreMem: RandomAccess + Debug + Send {}
impl<T: RandomAccess + Debug + Send> CoreMem for T {}
/// Same value as JS hyperbee https://github.com/holepunchto/hyperbee/blob/e1b398f5afef707b73e62f575f2b166bcef1fa34/index.js#L663
static PROTOCOL: &str = "hyperbee";
/// Same value as JS hyperbee https://github.com/holepunchto/hyperbee/blob/e1b398f5afef707b73e62f575f2b166bcef1fa34/index.js#L16-L18
static MAX_KEYS: usize = 8;
fn min_keys(max_keys: usize) -> usize {
max_keys >> 1
}
// TODO make not pub
#[derive(Clone, Debug)]
/// Reference used within a [`Node`] of the [Hypercore](hypercore::Hypercore) block where a
/// key-value pair is stored.
pub struct KeyValue {
/// Index of key value pair within the [`hypercore::Hypercore`].
seq: u64,
}
pub struct KeyValueData {
pub seq: u64,
pub key: Vec<u8>,
pub value: Option<Vec<u8>>,
}
// TODO make not pub
#[derive(Debug)]
/// Pointer used within a [`Node`] to reference to it's child nodes.
pub struct Child<M: CoreMem> {
/// Index of the [`BlockEntry`]within the [`hypercore::Hypercore`] that contains the [`Node`]
pub seq: u64,
/// Index of the `Node` within the [`BlockEntry`] referenced by [`Child::seq`]
pub offset: u64,
/// Cache of the child node
cached_node: Option<SharedNode<M>>,
}
//TODO make not pub
#[derive(Clone, Debug)]
/// A "block" from a [`Hypercore`](hypercore::Hypercore) deserialized into the form used in
/// Hyperbee
pub struct BlockEntry<M: CoreMem> {
/// Pointers::new(NodeSchema::new(hypercore.get(seq)).index))
nodes: Vec<SharedNode<M>>,
/// NodeSchema::new(hypercore.get(seq)).key
key: Vec<u8>,
/// NodeSchema::new(hypercore.get(seq)).value
value: Option<Vec<u8>>,
}
type Shared<T> = Arc<RwLock<T>>;
type SharedNode<T> = Shared<Node<T>>;
type NodePath<T> = Vec<(SharedNode<T>, usize)>;
#[derive(Debug)]
struct Children<M: CoreMem> {
blocks: Shared<Blocks<M>>,
children: RwLock<Vec<Child<M>>>,
}
// TODO make not pub
/// A node of the B-Tree within the [`Hyperbee`]
#[derive(Debug)]
pub struct Node<M: CoreMem> {
pub keys: Vec<KeyValue>,
children: Children<M>,
blocks: Shared<Blocks<M>>,
}
/// An append only B-Tree built on [`Hypercore`](hypercore::Hypercore). It provides a key-value
/// store API, with methods for [inserting](Hyperbee::put), [getting](Hyperbee::get), and
/// [deleting](Hyperbee::del) key-value pair. As well as creating [sorted
/// iterators](Hyperbee::traverse), and ["sub" B-Trees](Hyperbee::sub) for grouping related data.
#[derive(Debug, Builder)]
#[builder(pattern = "owned", derive(Debug))]
pub struct Hyperbee<M: CoreMem> {
tree: Shared<Tree<M>>,
}
impl<M: CoreMem> Hyperbee<M> {
/// The number of blocks in the hypercore.
/// The first block is always the header block so:
/// `version` would be the `seq` of the next block
/// `version - 1` is most recent block
pub async fn version(&self) -> u64 {
self.tree.read().await.version().await
}
/// Gets the root of the tree.
/// When `ensure_header == true` write the hyperbee header onto the hypercore if it does not exist.
pub async fn get_root(
&self,
ensure_header: bool,
) -> Result<Option<Shared<Node<M>>>, HyperbeeError> {
self.tree.read().await.get_root(ensure_header).await
}
/// Create the header for the Hyperbee. This must be done before writing anything else to the
/// tree.
pub async fn create_header(
&self,
metadata: Option<Metadata>,
) -> Result<AppendOutcome, HyperbeeError> {
self.tree.read().await.create_header(metadata).await
}
/// Returs a string representing the structure of the tree showing the keys in each node
pub async fn print(&self) -> Result<String, HyperbeeError> {
self.tree.read().await.print().await
}
/// Get the value corresponding to the provided `key` from the Hyperbee
/// # Errors
/// When `Hyperbee.get_root` fails
pub async fn get(&self, key: &[u8]) -> Result<Option<(u64, Option<Vec<u8>>)>, HyperbeeError> {
self.tree.read().await.get(key).await
}
/// Insert the given key and value into the tree
/// Returs the `seq` of the new key, and `Option<u64>` which contains the `seq` of the old key
/// if it was replaced.
#[tracing::instrument(level = "trace", skip(self), ret)]
pub async fn put(
&self,
key: &[u8],
value: Option<&[u8]>,
) -> Result<(Option<u64>, u64), HyperbeeError> {
self.tree.read().await.put(key, value).await
}
/// Like [`Hyperbee::put`] but takes a `compare_and_swap` function.
/// The `compared_and_swap` function is called with the old key (if present), and the new key.
/// The new key is only inserted if `compare_and_swap` returns true.
/// Returs two `Option<u64>`s. The first is the old key, the second is the new key.
pub async fn put_compare_and_swap(
&self,
key: &[u8],
value: Option<&[u8]>,
cas: impl FnOnce(Option<&KeyValueData>, &KeyValueData) -> bool,
) -> Result<(Option<u64>, Option<u64>), HyperbeeError> {
self.tree
.read()
.await
.put_compare_and_swap(key, value, cas)
.await
}
/// Delete the given key from the tree.
/// Returns the `seq` from the key if it was deleted.
pub async fn del(&self, key: &[u8]) -> Result<Option<u64>, HyperbeeError> {
self.tree.read().await.del(key).await
}
/// Like [`Hyperbee::del`] but takes a `compare_and_swap` function.
/// Before deleting the function is called with existing key's [`KeyValueData`].
/// The key is only deleted if `compare_and_swap` returs true.
/// Returns the `bool` representing the result of `compare_and_swap`, and the `seq` for the
/// key.
pub async fn del_compare_and_swap(
&self,
key: &[u8],
cas: impl FnOnce(&KeyValueData) -> bool,
) -> Result<Option<(bool, u64)>, HyperbeeError> {
self.tree.read().await.del_compare_and_swap(key, cas).await
}
/// Create a new tree with all it's operation's prefixed by the provided `prefix`.
pub fn sub(&self, prefix: &[u8]) -> Prefixed<M> {
Prefixed::new(prefix, self.tree.clone())
}
/// Traverse the tree based on the given [`TraverseConfig`]
pub async fn traverse<'a>(
&self,
conf: TraverseConfig,
) -> Result<Traverse<'a, M>, HyperbeeError> {
self.tree.read().await.traverse(conf).await
}
}
impl Hyperbee<random_access_disk::RandomAccessDisk> {
/// Helper for creating a Hyperbee
/// # Panics
/// when storage path is incorrect
/// when Hypercore failse to build
/// when Blocks fails to build
///
/// # Errors
/// when Hyperbee fails to build
pub async fn from_storage_dir<T: AsRef<Path>>(
path_to_storage_dir: T,
) -> Result<Hyperbee<random_access_disk::RandomAccessDisk>, HyperbeeError> {
let tree = tree::Tree::from_storage_dir(path_to_storage_dir).await?;
Ok(HyperbeeBuilder::default()
.tree(Arc::new(RwLock::new(tree)))
.build()?)
}
}
impl Hyperbee<random_access_memory::RandomAccessMemory> {
/// Helper for creating a Hyperbee in RAM
pub async fn from_ram(
) -> Result<Hyperbee<random_access_memory::RandomAccessMemory>, HyperbeeError> {
let tree = tree::Tree::from_ram().await?;
Ok(HyperbeeBuilder::default()
.tree(Arc::new(RwLock::new(tree)))
.build()?)
}
}
impl KeyValue {
fn new(seq: u64) -> Self {
KeyValue { seq }
}
}
impl<M: CoreMem> Child<M> {
fn new(seq: u64, offset: u64, node: Option<SharedNode<M>>) -> Self {
Child {
seq,
offset,
cached_node: node,
}
}
}
impl<M: CoreMem> Clone for Child<M> {
fn clone(&self) -> Self {
Self::new(self.seq, self.offset, self.cached_node.clone())
}
}
/// Deserialize bytes from a Hypercore block into [`Node`]s.
fn make_node_vec<B: Buf, M: CoreMem>(
buf: B,
blocks: Shared<Blocks<M>>,
) -> Result<Vec<SharedNode<M>>, DecodeError> {
Ok(YoloIndex::decode(buf)?
.levels
.iter()
.map(|level| {
let keys = level.keys.iter().map(|k| KeyValue::new(*k)).collect();
let mut children = vec![];
for i in (0..(level.children.len())).step_by(2) {
children.push(Child::new(
level.children[i],
level.children[i + 1],
Option::None,
));
}
Arc::new(RwLock::new(Node::new(keys, children, blocks.clone())))
})
.collect())
}
impl<M: CoreMem> Children<M> {
fn new(blocks: Shared<Blocks<M>>, children: Vec<Child<M>>) -> Self {
Self {
blocks,
children: RwLock::new(children),
}
}
#[tracing::instrument(skip(self))]
async fn insert(&self, index: usize, new_children: Vec<Child<M>>) {
if new_children.is_empty() {
trace!("no children to insert, do nothing");
return;
}
let replace_split_child = match new_children.is_empty() {
true => 0,
false => 1,
};
trace!(
"replacing child @ [{}] with [{}] children.",
index,
new_children.len()
);
self.children
.write()
.await
.splice(index..(index + replace_split_child), new_children);
}
#[tracing::instrument(skip(self))]
async fn get_child(&self, index: usize) -> Result<Shared<Node<M>>, HyperbeeError> {
let (seq, offset) = {
let child_ref = &self.children.read().await[index];
if let Some(node) = &child_ref.cached_node {
return Ok(node.clone());
}
(child_ref.seq, child_ref.offset)
};
let block = self
.blocks
.read()
.await
.get(&seq, self.blocks.clone())
.await?;
let node = block.read().await.get_tree_node(offset)?;
self.children.write().await[index].cached_node = Some(node.clone());
Ok(node)
}
async fn len(&self) -> usize {
self.children.read().await.len()
}
async fn splice<R: RangeBounds<usize>, I: IntoIterator<Item = Child<M>>>(
&self,
range: R,
replace_with: I,
) -> Vec<Child<M>> {
// Leaf node do nothing. Should we Err instead?
if self.children.read().await.is_empty() {
return vec![];
}
self.children
.write()
.await
.splice(range, replace_with)
.collect()
}
}
#[tracing::instrument(skip(node))]
/// Find the `key` in the `node` with a binary search
///
/// # Returns (`matched`, `index`)
///
/// `matched` is Some means we found the `key`.
///
/// if `matched` is None:
/// if `node` is not a leaf:
/// index of the child within the `node` where the `key` could be
/// if `node` is a leaf:
/// the index within this `node`'s keys where the `key` wolud be inserted
/// if `matched` is Some:
/// the index within this `node`'s keys of the `key`
// TODO rename me because it is not just child index
async fn get_index_of_key<M: CoreMem, T>(
node: SharedNode<M>,
key: &T,
) -> Result<(Option<u64>, usize), HyperbeeError>
where
T: PartialOrd<[u8]> + Debug + ?Sized,
{
let child_index: usize = 'found: {
// Binary search current node for matching key, or index of next child
let n_keys = node.read().await.keys.len();
if n_keys == 0 {
break 'found n_keys;
}
let mut low = 0;
let mut high = n_keys - 1;
while low <= high {
let mid = low + ((high - low) >> 1);
let KeyValueData {
seq,
key: other_key,
..
} = node.read().await.get_key_value(mid).await?;
// if matching key, we are done!
if key == &other_key[..] {
trace!(
"key {:?} == other_key {:?} at index {}",
key,
other_key,
mid
);
return Ok((Some(seq), mid));
}
if key < &other_key[..] {
if mid == 0 {
break;
}
// look lower
high = mid - 1;
} else {
// look higher
low = mid + 1;
}
}
break 'found low;
};
Ok((None, child_index))
}
/// Descend through tree to the node nearest (or matching) the provided key
/// Return value describes the path to the key. It looks like:
/// `(matched, path: Vec<(node, index)>)`
///
/// Here `matched` is a bool that indicates if the key was matched.
/// The `path` is a `Vec` that describes the path to the key. Each item is a tuple `(node, inde)`.
/// `path[0]` is the root of tree, and the last element would be final node,
/// which is always a leaf if `matched == false`.
/// In the `path` the `node` is a referenece to the node we passed through.
/// The `index` is the child index to the next node in the path.
/// In a leaf node, the `index` could be thought of as the gap between the node's keys where the provided
/// `key` would be ineserted. Or for `matched = true` the index of the matched key in the nodes's
/// keys.
#[tracing::instrument(skip(node))]
async fn nearest_node<M: CoreMem, T>(
node: SharedNode<M>,
key: &T,
) -> Result<(Option<u64>, NodePath<M>), HyperbeeError>
where
T: PartialOrd<[u8]> + Debug + ?Sized,
{
let mut current_node = node;
let mut out_path: NodePath<M> = vec![];
loop {
let next_node = {
let (matched, child_index) = get_index_of_key(current_node.clone(), key).await?;
out_path.push((current_node.clone(), child_index));
// found match or reached leaf
if matched.is_some() || current_node.read().await.is_leaf().await {
return Ok((matched, out_path));
}
// continue to next node
current_node.read().await.get_child(child_index).await?
};
current_node = next_node;
}
}
impl<M: CoreMem> Node<M> {
fn new(keys: Vec<KeyValue>, children: Vec<Child<M>>, blocks: Shared<Blocks<M>>) -> Self {
Node {
keys,
children: Children::new(blocks.clone(), children),
blocks,
}
}
pub async fn n_children(&self) -> usize {
self.children.len().await
}
async fn is_leaf(&self) -> bool {
self.n_children().await == 0
}
/// The number of children between this node and a leaf + 1
pub async fn height(&self) -> Result<usize, HyperbeeError> {
if self.is_leaf().await {
Ok(1)
} else {
let mut out = 1;
let mut cur_child = self.get_child(0).await?;
loop {
out += 1;
if cur_child.read().await.n_children().await == 0 {
return Ok(out);
}
let next_child = cur_child.read().await.get_child(0).await?;
cur_child = next_child;
}
}
}
/// Serialize this node
async fn to_level(&self) -> yolo_index::Level {
let mut children = vec![];
for c in self.children.children.read().await.iter() {
children.push(c.seq);
children.push(c.offset);
}
yolo_index::Level {
keys: self.keys.iter().map(|k| k.seq).collect(),
children,
}
}
#[tracing::instrument(skip(self))]
async fn get_key_value(&self, index: usize) -> Result<KeyValueData, HyperbeeError> {
let KeyValue { seq, .. } = self.keys[index];
let key = self
.blocks
.read()
.await
.get(&seq, self.blocks.clone())
.await?
.read()
.await
.key
.clone();
let value = self
.blocks
.read()
.await
.get(&seq, self.blocks.clone())
.await?
.read()
.await
.value
.clone();
Ok(KeyValueData { seq, key, value })
}
/// Get the child at the provided index
async fn get_child(&self, index: usize) -> Result<Shared<Node<M>>, HyperbeeError> {
self.children.get_child(index).await
}
/// Insert a key and it's children into [`self`].
#[tracing::instrument(skip(self))]
async fn insert(&mut self, key_ref: KeyValue, children: Vec<Child<M>>, range: Range<usize>) {
trace!("inserting [{}] children", children.len());
self.keys.splice(range.clone(), vec![key_ref]);
self.children.insert(range.start, children).await;
}
}
impl<M: CoreMem> BlockEntry<M> {
fn new(entry: messages::Node, blocks: Shared<Blocks<M>>) -> Result<Self, HyperbeeError> {
Ok(BlockEntry {
nodes: make_node_vec(&entry.index[..], blocks)?,
key: entry.key,
value: entry.value,
})
}
/// Get a [`Node`] from this [`BlockEntry`] at the provided `offset`.
/// offset is the offset of the node within the hypercore block
fn get_tree_node(&self, offset: u64) -> Result<SharedNode<M>, HyperbeeError> {
Ok(self
.nodes
.get(
usize::try_from(offset)
.map_err(|e| HyperbeeError::U64ToUsizeConversionError(offset, e))?,
)
.expect("offset *should* always point to a real node")
.clone())
}
}