use std::fs::File;
use std::io::{BufRead, BufReader};
use std::path::PathBuf;
pub fn read_merge_seq(file_name: &PathBuf) -> Vec<u8> {
let mut fna_seqs = Vec::<u8>::new();
let file = File::open(file_name).unwrap();
let mut reader = BufReader::new(file);
let mut buf = String::new();
while reader.read_line(&mut buf).unwrap() > 0 {
if !buf.starts_with('>') {
if buf.ends_with('\n') {
buf.pop(); }
if buf.ends_with('\r') {
buf.pop();
}
fna_seqs.extend_from_slice(buf.as_bytes());
} else {
fna_seqs.push(b'N');
}
buf.clear();
}
fna_seqs
}