hyalite 0.1.0

Exact, SIMD-accelerated sequence alignment (Smith-Waterman, Needleman-Wunsch, semi-global, overlap) with runtime CPU dispatch
Documentation 
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# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2024"
rust-version = "1.85"
name = "hyalite"
version = "0.1.0"
authors = ["James Ferguson <j.ferguson@garvan.org.au>"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Exact, SIMD-accelerated sequence alignment (Smith-Waterman, Needleman-Wunsch, semi-global, overlap) with runtime CPU dispatch"
homepage = "https://github.com/Psy-Fer/hyalite"
documentation = "https://docs.rs/hyalite"
readme = "README.md"
keywords = [
    "bioinformatics",
    "alignment",
    "genomics",
    "simd",
    "smith-waterman",
]
categories = [
    "science",
    "algorithms",
]
license = "MIT"
repository = "https://github.com/Psy-Fer/hyalite"

[lib]
name = "hyalite"
path = "src/lib.rs"

[[test]]
name = "alignment"
path = "tests/alignment.rs"

[[test]]
name = "backend_env"
path = "tests/backend_env.rs"

[[test]]
name = "database"
path = "tests/database.rs"

[[test]]
name = "opal_regressions"
path = "tests/opal_regressions.rs"

[[test]]
name = "properties"
path = "tests/properties.rs"

[[test]]
name = "real_data"
path = "tests/real_data.rs"

[[test]]
name = "sweeps"
path = "tests/sweeps.rs"

[[bench]]
name = "cr4_scan"
path = "benches/cr4_scan.rs"
harness = false

[dependencies]

[dev-dependencies.criterion]
version = "0.5"

[dev-dependencies.proptest]
version = "1"